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From: ucdstm-at-yahoo.com
Date: Mon, 3 Oct 2005 07:48:56 -0500
Subject: [Microscopy] viaWWW: STM tips

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I think that you will find that the oil contamination comes almost solely from the rotary
backing pump, not from the DP, so a foreline trap between the DP and the RP will work
very well. It will also be cheaper and much less trouble than a LN2 trap.

You may like to read Wil Bigelow's excellent book on EM vacuum systems.

cheers

rtch


Date sent: Fri, 30 Sep 2005 01:11:52 -0500
To: r.sims-at-auckland.ac.nz
X-from: tylko-at-zuk.iz.uj.edu.pl
Send reply to: tylko-at-zuk.iz.uj.edu.pl

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (ucdstm-at-yahoo.com) from http://www.microscopy.com/MLFormMail.html on Saturday, October 1, 2005 at 17:42:11
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Email: ucdstm-at-yahoo.com
Name: Christopher Fleming

Organization: University of California, Davis

Title-Subject: [Filtered] MListserver:

Question: What are a few suppliers of high quality PtIr STM tips?

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From: K.venner-at-ion.ucl.ac.uk
Date: Mon, 3 Oct 2005 07:50:12 -0500
Subject: [Microscopy] viaWWW: coating grids etc

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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (K.venner-at-ion.ucl.ac.uk) from http://www.microscopy.com/MLFormMail.html on Monday, October 3, 2005 at 03:20:55
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Email: K.venner-at-ion.ucl.ac.uk
Name: Kerrie Venner

Organization: Institute of Neurology UCL London

Title-Subject: [Filtered] MListserver: coating grids etc,

Question: The use of nose grease is news to me in the EM Lab, and will be filed away for future use. However, the use of nose grease is not confined to science; my flute teacher advocated applying it to the little finger on the right hand, to enable rapid and smooth key changes on the lower end of the instrument. Works a treat!

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From: lazarcorp-at-cs.com
Date: Mon, 3 Oct 2005 07:50:54 -0500
Subject: [Microscopy] viaWWW: LFR Mk3 film recorder

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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (lazarcorp-at-cs.com) from http://www.microscopy.com/MLFormMail.html on Monday, October 3, 2005 at 07:20:41
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Email: lazarcorp-at-cs.com
Name: Dennis Lazar

Title-Subject: [Filtered] MListserver:

Question: Is there a way to notify list members that I have a LFR Mk3
film recorder to donate to a university, school, etc. It is
nearly new in original shipping carton. All software and
hardware plus accessories. I do not want to join the list
but can someone post this for me?

Thank you

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From: owenha-at-csd.uwm.edu
Date: Mon, 3 Oct 2005 10:14:39 -0500
Subject: [Microscopy] Re: viaWWW: preparing coated grids for TEM

Contents Retrieved from Microscopy Listserver Archives
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On the topic of getting films to float off of slides.

My advisor taught me to polish new slides directly out of the box with
crumpled up Ross lens tissue, and to run the edge of a different dry slide
(held at about a 45 degree angle) along the edges of the coated slide to
separate the film from the glass when the slide is immersed in water.
Scrape down from the top of each long edge, then twice on the bottom (from
the middle to one side, then from the middle to the other). Breathe on
the film before floating it off. The films almost always come off, even
in class demos, with no hint of foundation makeup-contaminated nose grease
- not a concern, I'm sure, for all members of the list ;)

You need to rub all the way out to the edges of the flat top and bottom of
the slide with the lens tissue carefully (slide edges are sharp). I've
always used Corning brand slides, so I don't know whether there's
something special about them. I have no commercial interests in Ross lens
tissue, Corning slides, or Clinique, except as a satisfied user.

Heather Owen


Dr. Heather A. Owen, Director
Electron Microscope Laboratory
Department of Biological Sciences
University of Wisconsin - Milwaukee
Lapham Hall
3209 N. Maryland Ave.
Milwaukee, WI 53211
USA

Phone: (414)229-6816




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From: stranen_connelly-at-yahoo.com
Date: Mon, 3 Oct 2005 10:30:44 -0500
Subject: [Microscopy] Looking for manuals & documents for Amray 1000A

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Victoria,
I have access to the manuals that you requested and
will contact you off-List.
The SEM is located at the Univ. of Pennsylvania there
is a chance that it may be
de-commissioned but that is not certain. If it does,
then the part you wish may be available also.
Pat Connelly

vfink-at-shaw.ca wrote:
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submitted by (vfink-at-shaw.ca) from
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------------------------------------------------
Email: vfink-at-shaw.ca
Name: Victoria Fink
Organization: N/A
Title-Subject: [Filtered] MListserver: Looking for
manuals & documents
for Amray 1000A SEM

I am looking for the manuals, or copies of any
documents ( electrical
schemes, etc.) for Amray 1000A SEM? My friend bought
used one. Also, he
is trying to find, and interested to purchase the
electron gun for this
instrument. Thank you in advance for your kind advise,
and any help,
information regarding to this matter.



__________________________________
Yahoo! Mail - PC Magazine Editors' Choice 2005
http://mail.yahoo.com

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From: stranen_connelly-at-yahoo.com
Date: Mon, 3 Oct 2005 11:30:26 -0500
Subject: [Microscopy] substrate for cell culture

Contents Retrieved from Microscopy Listserver Archives
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I have used the Thermonox line of cover slips, and
there is no problem using Ethanol or Acetone for
dehydration or Propylene oxide and I have grown many
types of cells on them and so far all have been very
happy.

For face on cutting I always cut the bottom of the
cell layer first, choosing an area that was more dense
than is usually viewed at LM level - there are more
cells/section and it is easy to see the cell membranes
at TEM level if one needs to know which cell he is in.

To eliminate the plastic of the coverslip I trim so
that I catch an edge of the boundry between the
coverslip and the embedding epon with a razor blade or
the corner of a glass knife and this popps off the
plastic leaving a shiny surface ready to be sectioned.
Next I align the diamond knife NEARLY parallel so that
I do not section the whole face, just most of it.
That way if I make a little mistake in judgement,
there is still a lot of material to section and the
sections show a variety of depths of the cells with
some at the bottom surface while others show the
gradual levels of middle to surface depending on the
tilt of the block.
Many serial sections can be picked up on the same grid
if just the bottom edge of the block is sectioned for
the sections will be very thin from top to bottom but
can be as wide as one is comfortable with.

For cross section results one can use a sandwich type
of embedding by putting 2 pieces of coverslips into a
mold with the cell layers facing eachother. Trim into
the coverslips on both sides with a glass knife
(better control of depth) and the sections can be
nearly two mm in length but very narrow. This is
similar to a re-embedding technique that I presented
at M&M '77 and is published in Hyatt's TEM books.

If you do have a Hayett - PLEASE make a correction for
future reference...in working with TC cells grown in
standard plastic petri dishes or flasks like Falcon,
Costar, etc. several epon substitutes will melt the
plastic especially when in the oven so cross out the
word "Epon" and replace it with "LX-112 (Ladd) or
similar substitute". Most of you already know about
this but for beginners it can ruin an experiment if
followed as written. At the time that I presented the
paper I was still using the original epon from Shell
and was unaware that the several substitutes had
different properties until about 10 years ago when I
needed to use the technique again and melted a few
dishes!

Pat Connelly
(unemployed in Pennsylvania)

--- TindallR-at-missouri.edu wrote:
} One commonly used substrate is the Thermonox line of
} cover slips,available from many suppliers. They
come in various sizes and the cells can be grown on
them, then the coverslips with cells fixed, dehydrated
and embedded as usual. The section quite well, except
for an unfortunate tendency for sections not to detach
completely in the boat and to pull the next section
back over the edge of the knife. This can be remedied
by making a pointy block face or by using a razor
blade to make a line just beneath the top of the block
face so the section detaches just before the end of
the cutting stroke.

The cover slips can be cut into pieces small enough
to embed in ordinary capsules and are normally used to
do cross-sections through cell layers, as opposed to
"top down" sections. With care and creativity you
should also be able to get other orientations, but it
would be much trickier.

} I'm not 100% sure of their compatibility with PO,
but I don't believe it's a problem. They stand up
fine to EPON and other resins we use.

An alternative is to grow the cells on any old cover
slips, run them through the fixation, dehydration, and
infiltration steps, then place them cell side down on
top of resin filled (with a resin meniscus slightly up
over the top) embedding capsules.
Polymerize them as usual, taking care that they are
level so the cover slips don't slide off.
After everything is mostly hard, immerse the
coverslip/capsule assembly in liquid nitrogen, then
snap off the coverslip from the capsule. If all goes
well, and it usually does, the cells with transfer to
the resin in the capsule and form the top layer of the
block. Identify your area under a light microscope,
trim away the rest (careful!), then start taking
sections. Remember that there is only one cell
layer----if you cut through it and discard it by
mistake, it's gone.

} Randy Tindall
} EM Specialist
} Electron Microscopy Core Facility
} W122 Veterinary Medicine
} University of Missouri
} Columbia, MO 65211
} Email: tindallr-at-missouri.edu
} Web: http://www.emc.missouri.edu

} -----Original Message-----
} X-from: Ralph.Common-at-hc.msu.edu
} Sent: Thursday, September 29, 2005
} Subject: [Microscopy] substrate for cell culture
}
} A client needs to have cell cultures of endothelial
} cells embedded for TEM. I would be grateful to hear
(off line) specific recommendations
} for a substrate for growing the cells. The
} substrate will have to
} withstand ethanol and propylene oxide, and have good
} sectioning
} properties when used with an Epon type resin. I
} would also appreciate recommendations for fixation.
}
} Ralph Common
} Division of Human Pathology
} Michigan State University





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13, 20 -- Subject: Re: [Microscopy] RE: substrate for cell culture
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From: tivol-at-caltech.edu
Date: Mon, 3 Oct 2005 11:59:24 -0500
Subject: [Microscopy] viaWWW: preparing coated grids for TEM

Contents Retrieved from Microscopy Listserver Archives
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On Sep 30, 2005, at 12:00 PM, paul r hazelton wrote:

} 1. i've always used dichloroethane for formvar. what advantage would
} there be to chloroform - how well does work?
}
} 2. ok, i gotta plead ignorance. for delicacy perhaps we should use
} apiezon for the example and leave 'nose grease' to our fertile
} imaginations. but in 35 years i've never heard of using apiezon to
} help
} get the formvar off the slide for coated grids. i'm deeply intrigued.
} enlighten me. enlighten the rest of us. it could be a good trick to
} know.
}
Dear Paul,
Our lab in Albany had a recipe that called for dissolving formvar in
equal parts chloroform and acetone. I have also used the pre-made
solution of formvar in dichloroethane, and I haven't found any
particular difference. I don't know which of the two chloro-carbons is
more stable--I suspect DCE--but that would be the preferred solvent.
I tried two methods with apiazon, and had about equal success. I
should say that I was making holey formvar to end up with holey carbon
films, and I was having absolutely no luck getting the films to
separate from the glass slides until I tried the apiazon. The lab's
procedure called for taking pre-cleaned slides and rinsing them in
ethanol, then wiping them dry. They were then made more-or-less
controllably less clean by applying a thin coat of grease, but when the
oil from my skin proved to be deficient, and that from other members of
the lab worked, I decided to try something more well-defined. One
trick for aligning the holes in holey carbon is to apply the grease to
the slide, then rub with one's finger and thumb along the long
direction of the slide. The ridged residual grease will cause the
holes (made by glycerol droplets) to line up along the ridges. When I
first tried apiazon, I just used the same technique as with skin oil,
using as small an amount of apiazon as I could. Later I thought to
make the process even more well-defined by disolving the apiazon, and a
relatively-high-boiling-point petroleum ether (hexanes or heptanes most
likely) proved to be a good solvent. For this procedure, I dissolved a
measured amount of apiazon in 50 ml of solvent, then dipped the slide
and let it drain in the same manner as used for dipping in formvar
solution. In order to try to avoid any residual grease remaining on
the underside of the formvar, I floated the film off with a dilute,
warm detergent solution--0.25 g Alconox in 1 L DDH2O.
Yours,
Bill Tivol, PhD
EM Scientist and Manager
Cryo-Electron Microscopy Facility
Broad Center, Mail Code 114-96
California Institute of Technology
Pasadena CA 91125
(626) 395-8833
tivol-at-caltech.edu



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From: connie.a.cummings-at-gsk.com
Date: Mon, 3 Oct 2005 12:25:17 -0500
Subject: [Microscopy] viaWWW: feedback on JEOL 1010 microscope

Contents Retrieved from Microscopy Listserver Archives
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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (connie.a.cummings-at-gsk.com) from http://www.microscopy.com/MLFormMail.html on Monday, October 3, 2005 at 10:43:15
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Email: connie.a.cummings-at-gsk.com
Name: Connie Cummings

Organization: GlaxoSmithKline

Title-Subject: [Filtered] MListserver:

Question: Good day,
I am in need of some information from those folks out there that have a JEOL 1010 microscope? Are you happy with it? Has it had many problems and if so what type of problems? I appreciate any feedback.
Thanks so much.
Connie

---------------------------------------------------------------------------

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From: stmccart-at-vt.edu
Date: Mon, 3 Oct 2005 13:02:00 -0500
Subject: [Microscopy] TEM of partially fluorinated disulfonated poly(arylene ether

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

We are trying to image the hydrophilic/hydrophobic bulk phase separation
behavior of a series of partially fluorinated disulfonated poly(arylene ether
sulfone) random copolymers using TEM. The copolymers are completely
amorphous and the
only difference between the hydrophilic and hydrophobic sections of their
backbone is that the hydrophilic section possesses two sulfonic acid groups,
each one covalently bonded to one of two arylene rings which flank a sulfone
group. A membrane solvent-cast from one of these copolymers was
quantitatively titrated with cesium hydroxide in an attempt to increase the
difference in electron density between the hydrophobic and hydrophilic
domains. Despite efforts to microtome samples as thin as possible (~50 nm),
little to no contrast was observed in the micrographs of these samples imaged
by TEM at 100kV. We would appreciate any suggestions for alternative staining
techniques for these copolymers.


Stephen McCartney
Senior Research Associate
Macromolecules and Interfaces Institute
2108 Hahn Hall
Va Tech
Blacksburg, VA 24061
540-231-9765 - phone
540-231-8517 - FAX


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From: ladres-at-worldnet.att.net
Date: Mon, 3 Oct 2005 15:13:02 -0500
Subject: [Microscopy] need a microscope

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

We need an American Optical Model 27K Stereo Scope with an 8x objective. If
we can't get the full microscope then we can take just the 8x objective.
If any knows where we can get one please let me know.

Thank you,

Ron Peck

Ladd Research
83 Holly Court
Williston, VT 05495

On-line Catalog: http://www.laddresearch.com

tel: 1-802-658-4961(anywhere) or 1-800-451-3406(US)
fax: 1-802-660-8859
e-mail: ladres-at-att.net




==============================Original Headers==============================
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From: wpchan-at-u.washington.edu
Date: Mon, 3 Oct 2005 16:03:54 -0500
Subject: [Microscopy] CPD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi

I have a question about one of the steps in CPD using ethanol and CO2.
We have both a Denton DCP-1 and a Bomer 900EX. I was taught that I should
never let the sample exposed to air after passing the higher alcohol
concentrations e.g., 75% and above. When transferring the dehydrated
sample from the ethanol into the CPD chamber, I will fill the chamber with
enough ethanol to submerge the prep and then transfer the sample
basket/container quickly into the CPD chamber. However, I have come
across quite a few protocols that either do not specify this or simply
fill the chamber with CO2 "snow".

So my question is, should I fill the chamber with ethanol? Am I being
overly cautious or have I missed anything critical (no puns intended!)?
Can this be sample specific e.g., smaller or delicate samples may be
more prone to surface tension disruption? Any advice and comments are
much appreciated.

--
Pang (Wai Pang Chan, wpchan-at-u.washington.edu)

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From: ian-at-emu.usyd.edu.au
Date: Tue, 4 Oct 2005 00:57:11 -0500
Subject: [Microscopy] SEM 505 Monitor

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Does anyone know who manufactures the monitors used on a Philips SEM505
and/or
whether or not they are obtainable 3rd party?


Dr Ian J Kaplin
Manager, Scanning Electron Microscopy

Electron Microscope Unit
The University of Sydney
NSW 2006
Australia

TEL) + 61 2 9351 3302
FAX) + 61 2 9351 7682
ian.kaplin-at-emu.usyd.edu.au
www.emu.usyd.edu.au
Madsen Building F09
Room LG21

ACMM (19) Sydney 2006:
http://www.acmm19.org.au/


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From: bjulies-at-uwc.ac.za
Date: Tue, 4 Oct 2005 03:59:49 -0500
Subject: [Microscopy] 23 year old Hitachi X650

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi

Anybody have a 23 year old Hitachi X650 SEM standing around gathering
dust? We, in Cape Town, South Africa, are in desperate need of spares. I
would be really glad if you could help.

Thanks

Basil



Dr. Basil Julies
Director
Electron Microscope Unit
Physics Department
University of the Western Cape
Private Bag X17
Bellville 7535
Tel : (27)(21) 959 2327 or 959 3458
Fax : (27)(21) 959 1335 or 959 3474

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From: cornheadorama-at-hotmail.com
Date: Tue, 4 Oct 2005 07:57:54 -0500
Subject: [Microscopy] viaWWW: High Vacuum Sealing Wax?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I don't wish to turn this into a nose grease forum, but I did come
across nose grease as a suitable emergency photographic film scratch
remover. I believe it was an old journalist/photographer trick for
those times when small scratches needed to be reduced in the darkroom.

I have tried this and it does work, but I would only ever use it for
fine scratches on the back of film (not the emulsion side). If it's a
valuable negative it might be safer to use something more proprietary.

I wonder if any of the e.m. supply companies has considered putting
artificial nose grease onto their catalogues.

Malcolm

Malcolm Haswell
e.m. unit
School of Health, Natural and Social Sciences
University of Sunderland
Tyne & Wear
SR1 3SD
UK
e-mail: malcolm.haswell-at-sunderland.ac.uk


----- Original Message -----
X-from: K.venner-at-ion.ucl.ac.uk

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (cornheadorama-at-hotmail.com) from http://www.microscopy.com/MLFormMail.html on Monday, October 3, 2005 at 20:51:14
---------------------------------------------------------------------------

Email: cornheadorama-at-hotmail.com
Name: Jeff Miller

Title-Subject: [Filtered] MListserver: High Vacuum Sealing Wax?

Question: Can anyone recommend some low vapor pressure sealing or adhesive waxes or putties for semi-permanent sealing of high vacuum leaks, and maybe to seal mis-matched flanges under compression: that kind of thing. Probably a pair of waxes with melting points of about 60C and 100C or more would help.

Obviously they should have good adhesion properties, preferrably at low temps as well. I'd expect that a small amount of flexibility would be helpful. Best if it has no colorant or secret ingredients.

I'm thinking some of the materials used in mouting specimens might work.

I haven't tried any waxes yet. I've checked specs on a few Apiezon waxes but they seem to have higher vapor pressures than their greases.

Vacseal seems too permanent for most of what I had in mind.

So far I've tried Duxseal, but it has an odor which I can't imagine is good for hi-vac. And sure enough it will cavitate and spring a leak: if you apply it, squeeze tight, and "remove" it you will often get a very good seal that leaks again a few hours later.

Critoseal has no odor and is mostly PVC, I'll be trying that and probably analyzing it for weight loss under vacuum soon. I'm wondering if there are some plumber's putties to consider, there might be some gimmicky teflon putty that could be just the ticket. I was recently gifted 1 oz. of amorphous Teflon powder, which I might try mixing with some heavy Apiezon greases.

-Jeff


---------------------------------------------------------------------------

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From: mike.young-at-yale.edu
Date: Tue, 4 Oct 2005 08:28:18 -0500
Subject: [Microscopy] Re: viaWWW: High Vacuum Sealing Wax?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

The old remedy I recall from the Dark Ages is: "glyptal". It was
originally marketed (by GE?) as an anti-corona goop , but soon
thereafter someone discovered it had surprisingly good vacuum sealing
properties as well.

Does anyone know if it's still available?

--Mike Young
mike.young-at-yale.edu

cornheadorama-at-hotmail.com wrote:

}
}
} Title-Subject: [Filtered] MListserver: High Vacuum Sealing Wax?
}
} Question: Can anyone recommend some low vapor pressure sealing or adhesive waxes or putties for semi-permanent sealing of high vacuum leaks, and maybe to seal mis-matched flanges under compression: that kind of thing. Probably a pair of waxes with melting points of about 60C and 100C or more would help.
}
} {snip}
}
}


==============================Original Headers==============================
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From: ab78-at-esc.cam.ac.uk
Date: Tue, 4 Oct 2005 08:41:10 -0500
Subject: [Microscopy] Re: glyptal... Re: viaWWW: High Vacuum Sealing Wax?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

http://www.caswellplating.com/aids/glyptal.html


mike.young-at-yale.edu wrote:
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
} The old remedy I recall from the Dark Ages is: "glyptal". It was
} originally marketed (by GE?) as an anti-corona goop , but soon
} thereafter someone discovered it had surprisingly good vacuum sealing
} properties as well.
}
} Does anyone know if it's still available?
}
} --Mike Young
} mike.young-at-yale.edu
}
} cornheadorama-at-hotmail.com wrote:
}
}
} }
} } Title-Subject: [Filtered] MListserver: High Vacuum Sealing Wax?
} }
} } Question: Can anyone recommend some low vapor pressure sealing or adhesive waxes or putties for semi-permanent sealing of high vacuum leaks, and maybe to seal mis-matched flanges under compression: that kind of thing. Probably a pair of waxes with melting points of about 60C and 100C or more would help.
} }
} } {snip}
} }
} }
}
}
}
} ==============================Original Headers==============================
} 6, 22 -- From mike.young-at-yale.edu Tue Oct 4 08:28:18 2005
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} 6, 22 -- Subject: Re: [Microscopy] viaWWW: High Vacuum Sealing Wax?
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}

--

Andy Buckley

AB78-at-ESC.CAM.AC.UK
DEPARTMENT OF EARTH SCIENCES
UNIVERSITY OF CAMBRIDGE Tel +44 1223 333469
DOWNING STREET +44 1223 333400
CAMBRIDGE FAX +44 1223 333450
CB2 3EQ

Manager of XRD discussion list:
http://www.jiscmail.ac.uk/lists/xrd.html

==============================Original Headers==============================
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From: jbs-at-temple.edu
Date: Tue, 4 Oct 2005 09:40:00 -0500
Subject: [Microscopy] History - Van Leeuwenhoek Lenses

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi all,

I was re-reading some catalogues of exhibits of Van Leeuwenhoek
microscopes, and I was struck, as usual, by the description of the
glass lenses that he made for his observations. These descriptions
reminded me of a comment that I overheard in passing at a recent M&M
meeting that Van Leeuwenhoek also made (or used) lenses made of
droplets of water. I know that he made a "water microscope", but I
always understood this to mean that the sample was liquid, contained
in a glass tube. Can anyone provide verification of the use of water
as a lens?

Joel




Joel B. Sheffield, Ph.D.
Biology Department, Temple University
1900 North 12th Street
Philadelphia, PA 19122
jbs-at-temple.edu
(215) 204 8839, fax (215) 204 0486
http://astro.temple.edu/~jbs


==============================Original Headers==============================
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From: pgrover-at-bilbo.bio.purdue.edu
Date: Tue, 4 Oct 2005 10:21:56 -0500
Subject: [Microscopy] water lens van Leeuwenhoek microscopes

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Joel,

Check out

http://www.microscopy-uk.net/mag/indexmag.html?http://www.microscopy-uk.net/
mag/art98/watermic.html

I haven't made a water drop microscope, but I have been making Leeuwenhoek
glass ball microscope replicas. I haven't yet honed my lensmaking skills to
resolve bacilli, spirilla, cocci, like he did, but diatoms look awesome
through it! I just twirl a glass thread in a flame to make the spheres, but
I don't think I have the patience to do the polishing that he did. I may
cheat and buy one of the Edmund Optics glass ball lenses (~$20).

Paul Grover


The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

Hi all,

I was re-reading some catalogues of exhibits of Van Leeuwenhoek
microscopes, and I was struck, as usual, by the description of the
glass lenses that he made for his observations. These descriptions
reminded me of a comment that I overheard in passing at a recent M&M
meeting that Van Leeuwenhoek also made (or used) lenses made of
droplets of water. I know that he made a "water microscope", but I
always understood this to mean that the sample was liquid, contained
in a glass tube. Can anyone provide verification of the use of water
as a lens?

Joel




Joel B. Sheffield, Ph.D.
Biology Department, Temple University
1900 North 12th Street
Philadelphia, PA 19122
jbs-at-temple.edu
(215) 204 8839, fax (215) 204 0486
http://astro.temple.edu/~jbs






==============================Original Headers==============================
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18, 24 -- Subject: water lens van Leeuwenhoek microscopes
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From: pgrover-at-bilbo.bio.purdue.edu
Date: Tue, 4 Oct 2005 10:36:50 -0500
Subject: [Microscopy] re: water drop microscope - p.s.

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

For some reason, if you just click on the url, the last part of it doesn't
copy, and you won't get all the way to the web page. You may have to cut 'n
paste the last part, or type it in, but it's worth the trouble!


Joel,

Check out

http://www.microscopy-uk.net/mag/indexmag.html?http://www.microscopy-uk.net/
mag/art98/watermic.html

I haven't made a water drop microscope, but I have been making Leeuwenhoek
glass ball microscope replicas. I haven't yet honed my lensmaking skills to
resolve bacilli, spirilla, cocci, like he did, but diatoms look awesome
through it! I just twirl a glass thread in a flame to make the spheres, but
I don't think I have the patience to do the polishing that he did. I may
cheat and buy one of the Edmund Optics glass ball lenses (~$20).

------------------------------------------------------------------------
May your trails be crooked, winding, lonesome, dangerous, leading to the
most amazing view.

- Edward Abbey




==============================Original Headers==============================
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From: keith.morris-at-ucl.ac.uk
Date: Tue, 4 Oct 2005 10:43:40 -0500
Subject: [Microscopy] viaWWW: High Vacuum Sealing Wax?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Do you mean glyptal red enamel ? - the automotive stuff that is used to seal
glass coverslips to slides like high performance nail varnish (for cleared
insect bodies etc...). It's a hard [cellulose derived polyester alkyd resin]
paint you see on dynamo's & other electric machinery and some engines (and
it seals up pores in engine blocks). Glyptal was made by General Electric
(who coined the name in the 20's). If so try:

http://onlinesaleshop.biz/eastwood-product-2591.html (or the link I notice
has just been given )

http://www.glyptal.com/ is down at the moment for some reason but they do
make other types (I'm sure black at least).

I'm sure I've have seen it somewhere as a clear varnish that may suit
better, as a re-inforcement for cloth mouldings. I think glyptal paint is
normally baked in a curing oven when on metal (which makes it rather
permanent should things go wrong).

Sam's laser facts suggests using Glyptal red for vacuum sealing : "Anyhow,
once the whole affair was drenched in Red Glyptal, leaks really weren't an
issue!" :
http://weber.ucg.ie/mirrors/www.repairfaq.org/sam/lasercon.htm (search for
Glyptal)
so I suppose it must be OK.

Originally clear Glyptal resin was used similarly to shellac (e.g. as a hard
coating/glue). It ages badly though going red tinged over the years (eg. on
fossils). You can use acetone to remove Glyptal when used as a sealant on
slides (but its not very easy), but I'm not sure it will be at all easy if
bake cured onto metal.

Keith

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk


==============================Original Headers==============================
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From: jbs-at-temple.edu
Date: Tue, 4 Oct 2005 11:06:23 -0500
Subject: [Microscopy] water drop microscope - p.s.

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Thank you very much. I enjoyed the references. It's an amusing idea
to use the biological lens as a microscope lens. So, did Van
Leeuwenhoek himself use one of these?


BTW, the URL that finally worked was:

http://www.microscopy-uk.net/mag/art98/watermic.html

When I entered this, the web site generated the full URL. Odd.

}
}
}
} ----------------------------------------------------------------------
} ------ The Microscopy ListServer -- CoSponsor: The Microscopy Society
} of America To Subscribe/Unsubscribe --
} http://www.microscopy.com/MicroscopyListserver On-Line Help
} http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------
} ------
}
} For some reason, if you just click on the url, the last part of it
} doesn't copy, and you won't get all the way to the web page. You may
} have to cut 'n paste the last part, or type it in, but it's worth the
} trouble!
}
}
} Joel,
}
} Check out
}
} http://www.microscopy-uk.net/mag/indexmag.html?http://www.microscopy-u
} k.net/ mag/art98/watermic.html
}
} I haven't made a water drop microscope, but I have been making
} Leeuwenhoek glass ball microscope replicas. I haven't yet honed my
} lensmaking skills to resolve bacilli, spirilla, cocci, like he did,
} but diatoms look awesome through it! I just twirl a glass thread in a
} flame to make the spheres, but I don't think I have the patience to do
} the polishing that he did. I may cheat and buy one of the Edmund
} Optics glass ball lenses (~$20).
}
} ----------------------------------------------------------------------
} -- May your trails be crooked, winding, lonesome, dangerous, leading
} to the most amazing view.
}
} - Edward Abbey
}
}
}
}
} ==============================Original
} Headers============================== 10, 24 -- From
} pgrover-at-bilbo.bio.purdue.edu Tue Oct 4 10:36:50 2005 10, 24 --
} Received: from mailhub129.itcs.purdue.edu (mailhub129.itcs.purdue.edu
} [128.210.5.129]) 10, 24 -- by ns.microscopy.com (8.12.11/8.12.8) with
} ESMTP id j94FanLt027960 10, 24 -- for {microscopy-at-microscopy.com} ;
} Tue, 4 Oct 2005 10:36:49 -0500 10, 24 -- Received: from paklabpgrover
} (dhcp155-241.bio.purdue.edu [128.210.155.241]) 10, 24 -- by
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} j94FanN4011651 10, 24 -- for {microscopy-at-microscopy.com} ; Tue, 4 Oct
} 2005 10:36:49 -0500 10, 24 -- From: "pgrover"
} {pgrover-at-bilbo.bio.purdue.edu} 10, 24 -- To:
} {microscopy-at-microscopy.com} 10, 24 -- Subject: re: water drop
} microscope - p.s. 10, 24 -- Date: Tue, 4 Oct 2005 10:36:49 -0500 10,
} 24 -- Message-ID: {000001c5c8f9$6ff70a00$f19bd280-at-paklabpgrover} 10,
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} Headers==============================


Joel B. Sheffield, Ph.D.
Biology Department, Temple University
1900 North 12th Street
Philadelphia, PA 19122
jbs-at-temple.edu
(215) 204 8839, fax (215) 204 0486
http://astro.temple.edu/~jbs


==============================Original Headers==============================
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9, 20 -- From: "Joel Sheffield" {jbs-at-temple.edu}
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From: edelmare-at-muohio.edu
Date: Tue, 4 Oct 2005 11:09:06 -0500
Subject: [Microscopy] Re: CPD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Pang:

I think your being a little overly cautious - which should not hurt,
but may take longer in CO2 flushing to remove (plus sends a lot of
EtOH out the CPD exhaust to evaporate which generally appears
be against most chemical waste protocols, which I will not argue
either way)

In my experience the rule is: Always keep the samples wetted,
prevent "air drying". We usually process CPD samples inside of
little containers (metal baskets or scintered teflon, i.e. marshmallow
baskets, or coverslip racks). We load the samples into the
containers under 100% EtOH, and then transfer the containers to
the CPD chamber. Alot of EtOH gets transfered with the samples
into the CPD chamber. (To test this place a basket into EtOH,
carefully remove it from the EtOH with forceps, and then give it a
hard shake over a counter top. You will see alot of EtOH coming
from the basket). This EtOH carries over long enough for us to
replace the CPD chamber lid, tighten down the retaining bolts, and
crack open the CO2 fill valve. As soon as some CO2 hits the
chamber: (1) the expanding gas cools the chamber atmosphere,
(2) rapidly increases the chamber pressure, and (3) starts wetting
the samples with CO2. The first two conditions slow and stop the
vaporization of the EtOH, and the third wets the sample with a new
solution.

As I tell my students the only "rush" period in CPD preparation
is from the moment the sample baskets are removed from the
100% solvent and the CO2 fill valve is cracked open (cracked open
slowly to prevent throwning the sample basket(s) around inside the
CPD chamber as the CO2 rushes into fill the chamber.

And as a followup to this: Never allow the CO2 level to fall
below the sample height during the CO2 flushes. Until you are
transitioning to the critical point (in which case you are also dealing
with a saturated liquid CO2 environment anyway).

On 3 Oct 2005, at 16:04, wpchan-at-u.washington.edu wrote:

}
} Hi
}
} I have a question about one of the steps in CPD using ethanol and CO2.
} We have both a Denton DCP-1 and a Bomer 900EX. I was taught that I should
} never let the sample exposed to air after passing the higher alcohol
} concentrations e.g., 75% and above. When transferring the dehydrated
} sample from the ethanol into the CPD chamber, I will fill the chamber with
} enough ethanol to submerge the prep and then transfer the sample
} basket/container quickly into the CPD chamber. However, I have come
} across quite a few protocols that either do not specify this or simply
} fill the chamber with CO2 "snow".
}
} So my question is, should I fill the chamber with ethanol? Am I being
} overly cautious or have I missed anything critical (no puns intended!)?
} Can this be sample specific e.g., smaller or delicate samples may be
} more prone to surface tension disruption? Any advice and comments are
} much appreciated.
}
} --
} Pang (Wai Pang Chan, wpchan-at-u.washington.edu)
}


Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu

"WE ARE MICROSOFT.
RESISTANCE IS FUTILE.
YOU WILL BE ASSIMILATED."

==============================Original Headers==============================
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From: rcbaker-at-eden.infohwy.com
Date: Tue, 4 Oct 2005 11:26:45 -0500
Subject: [Microscopy] water drop microscope - p.s.

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Actually Leeuwenhoek used ground and polished glass lenses, probably
made with a tube lap. He was certainly familiar with "blown" or fused
lenses which, however, usually do not have the accuracy of curvature
required for the best optical performance.

Details on how to grind and polish short focus bead lenses and
various other ways to make homemade microscope objectives with high
resolution are given here:

{http://www.science-info.org/pages/Roger%20Baker/homemade-
microscope.pdf}

Leeuwenhoek's highest resolution discoveries must certainly have been
made with the front lens in wet contact with the specimen, since the
laws of optical physics do not permit the sub-micron resolution
needed to observe bacteria and the correct tail length of
spermatozoa; a one micron resolution is about the best that can be
done with a dry lens.

These conclusions are more fully discussed in my article in "The
Microscope"; "Leeuwenhoek, the Short-focus Lens, and the History of
Optics; an Experimental Inquiry" in the first quarter of 1993.

The known facts seem to indicate that Leeuwenhoek must have both
invented the immersion objective and used a double lens, although he
used and revealed various single lens microscopes too. This explains
a number of historical facts, including Leeuwenhoek's claim that he
did not reveal his best microscopes to others.

-- Roger, Austin



On Oct 4, 2005, at 10:39 AM, pgrover-at-bilbo.bio.purdue.edu wrote:


}
} For some reason, if you just click on the url, the last part of it
} doesn't
} copy, and you won't get all the way to the web page. You may have
} to cut 'n
} paste the last part, or type it in, but it's worth the trouble!
}
}
} Joel,
}
} Check out
}
} http://www.microscopy-uk.net/mag/indexmag.html?http://
} www.microscopy-uk.net/
} mag/art98/watermic.html
}
} I haven't made a water drop microscope, but I have been making
} Leeuwenhoek
} glass ball microscope replicas. I haven't yet honed my lensmaking
} skills to
} resolve bacilli, spirilla, cocci, like he did, but diatoms look
} awesome
} through it! I just twirl a glass thread in a flame to make the
} spheres, but
} I don't think I have the patience to do the polishing that he did.
} I may
} cheat and buy one of the Edmund Optics glass ball lenses (~$20).

==============================Original Headers==============================
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From: cgarber-at-2spi.com
Date: Tue, 4 Oct 2005 11:43:04 -0500
Subject: [Microscopy] Glyptal products

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Further on the discussion on Glyptal, this was once all part of General
Electric, and in 1985, the business unit was spun out of GE and now operates
as


GLYPTAL, INC.
305 Eastern Ave.
Chelsea, Ma 02150
(617) 884-6918
1-800-GLP-1201
FAX (617) 884-8376
E-MAIL billhoag-at-comcast.net

The original products made by GE were formulated to be insulating paints for
electrical applications. I can remember back in my days at the DuPont
Experimental Station, and I am talking about the late 1960's, one of the
technicians (Bob Schatz, who was a "teacher" for more than just a few of us
on this listserver) considered his little bottle of Glyptal liquid to be one
of his most valuable possessions. He used it on the bell jar gaskets when
they developed cracks, among other things. However I don't recall his ever
referring to it as anything other than "Glyptal", even though there is an
entire list of products sold under the trade name Glyptal.

However, with the passing of time, there have emerged better vacuum leak
sealant materials, some having been previously mentioned, such as VacSeal.
Another one but not previously mentioned is CelvaSeal. We ourselves prefer
VacSeal because of its lower viscosity. Both end up being cured silicones
and when one wants to remove them, they won't come off with some magic
solvent. But I would assume that there is some temperature where they would
come off but probably before reaching traditional "bake out" temperatures.

Disclaimer: SPI Supplies offers both VacSeal and CelvaSeal vacuum leak
sealants on the SPI Supplies website (see below).

Chuck

============================================

Charles A. Garber, Ph. D. Ph: 1-610-436-5400
President
SPI SUPPLIES FAX: 1-610-436-5755
PO BOX 656 e-mail:cgarber-at-2spi.com
West Chester, PA 19381-0656 USA
Cust.Service: spi2spi-at-2spi.com

Look for us!
########################
WWW: http://www.2spi.com
########################
============================================



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From: jpshield-at-uga.edu
Date: Tue, 4 Oct 2005 13:30:40 -0500
Subject: [Microscopy] EM job - material/physical

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Assistant Research Scientist Position in Material
Characterization

The Center for Advanced Ultrastructural Research (CAUR) at
University of Georgia announces an opening for a material
characterization specialist in the field of electron
microscopy and X-ray microanalysis. The CAUR supports seven
major research instruments --- two SEMs, two TEMs, a
multiphoton/confocal microscope (polarization/DIC capable),
an X-ray microtomography unit, and a digital inverted
fluorescence microscope. The center has a large and growing
user community in the physical, material, and geological
sciences. This person will be hired at the level of Research
Assistant Scientist, which is a long-term promotion-track
position.
Candidates should have a publication record and commensurate
skills in materials science, electron diffraction, and
sample preparation of both synthetic and natural materials.
A Ph.D. or equivalent experience in the physical sciences
required.
The individual will be responsible for training and
supervising users for TEM, SEM, X-ray microtomography,
collaboration on research proposals, and will have an
opportunity for conducting and publishing research in their
own area of expertise.
Applicants should submit a curriculum vitae, statement of
research interests, and contact information for three
references to Prof. Charles Keith, Director, Center for
Advanced Ultrastructural Research, 151 Barrow Hall,
University of Georgia, Athens, GA 30602.
chkeith-at-cb.uga.edu. Application review will start on
November 1, 2005. Applications received by that date are
assured consideration. UGA is an Equal
Opportunity/Affirmative Action Institution.

John P. Shields
Center for Ultrastructural Research
151 Barrow Hall
University of Georgia
Athens, GA 30602

706-542-4080

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From: fundatel-at-gmail.com
Date: Tue, 4 Oct 2005 14:34:42 -0500
Subject: [Microscopy] Looking for SEM and TEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hello,
We are looking for working´s TEM and SEM with manuals to receive it in
donation. Our non profit organization will begin teaching and I+ D
proyects with this equipment
We will pay shipping and handling costs

thanks in advance

Fernando Balducci
President
--
Fundatel
Fundación de Telemedicina
Gualeguaychú 878 Dpto 3
Paraná (ER) - Argentina
TE: +54-(0)343-4221716
www.fundatel.org.ar


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From: Roland.Nitschke-at-biologie.uni-freiburg.de
Date: Tue, 4 Oct 2005 14:50:11 -0500
Subject: [Microscopy] Announcment for Imaging Symposium "From static spots to dynamic proteome

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Colleagues,
the Foundation of the “Freiburg Center for Systems Biology” (ZBSA)
at the Albert-Ludwigs-University of Freiburg will take place on November
3, 2005.

Linked to this event is an


*International Imaging Symposium November 4-5, 2005*


*"From static spots to dynamic proteome visualization and beyond"*

organized by the Life Imaging Center Freiburg and sponsored by DFG, BMBF
and SFBs 388, 505, 592.*
*
List of speakers:

F. Brandizzi, Saskatoon (CDN) W. Denk, Heidelberg (D)
M. Dickinson, Houston (USA) TWJ. Gadella, Amsterdam (NL)
G. Galizia, Konstanz (D) H. Gerdes, Heidelberg (D)
M. Heisler, Pasadena (USA) T. Hirano, Tskuba-Higashi (J)
T. Kerpolla, Ann Arbor (USA) P. Lipp, Homburg (D)
J. Lippincott-Schwartz, Bethesda (USA)
T. Meyer, Stanford (USA) R. Murphy, Pittsburgh (USA)
L. Nedbal, Nove Hrady (CZ) M. Oheim, Paris (F)
H. Okamoto, Wako City (J) R. Pepperkok, Heidelberg (D)
W. Schubert, Magdeburg (D) E. Stelzer, Heidelberg (D)
D. Toomre, New Haven (USA) R. Uhl, Martinsried (D)
F. Wouters, Göttingen (D) W. Zipfel, Ithaca (USA)

Further information at:
http://www.zbsa.uni-freiburg.de/seminar/event.php


If you are interested in the Systems Biology Symposium please look here:
Foundation of the Center for Systems Biology (ZBSA) November 3, 2005
http://www.zbsa.uni-freiburg.de/seminar/events.php

Detailed meeting programs and registration and accomodation
information are available on the web.

We are looking forward to see you in Freiburg.

Roland Nitschke and Klaus Palme

___________________________
Nitschke, Roland Dr.
Life Imaging Center
Institute of Biology
Albert-Ludwigs-University Freiburg
Hauptstr.1
D-79104 Freiburg
Germany
___________________________
E-mail: Roland.Nitschke-at-biologie.uni-freiburg.de
phone: 49-761-2032934 or 2902
fax: 49-761-2032941
http://www.sfb592.uni-freiburg.de/z2/index.html

==============================Original Headers==============================
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15, 25 -- visualization and beyond", Freiburg, Germany 04. - 05.11.2005
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From: classiccarguy89-at-aol.com
Date: Wed, 5 Oct 2005 08:16:03 -0500
Subject: [Microscopy] AskAMicroscopist: Aquaspirillium serpens

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (classiccarguy89-at-aol.com) from http://www.microscopy.com/Ask-A-Microscopist/Ask-A-Microscopist.html on Thursday, September 29, 2005 at 22:08:06
---------------------------------------------------------------------------

Email: classiccarguy89-at-aol.com
Name: Ben

Organization: Hemlock High

Education: 9-12th Grade High School

Location: Hemlock, MI, USA

Question: What is Aquaspirillium serpens?

---------------------------------------------------------------------------

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From: patricia.correia-at-kcl.ac.uk
Date: Wed, 5 Oct 2005 08:16:33 -0500
Subject: [Microscopy] AskAMicroscopist: measuring the size of salivary glands

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (patricia.correia-at-kcl.ac.uk) from http://www.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Wednesday, October 5, 2005 at 03:35:27
---------------------------------------------------------------------------

Email: patricia.correia-at-kcl.ac.uk
Name: Patricia Correia

Organization: King's College

Education: Graduate College

Location: London, U.K.

Question: I am interested in measuring the size of salivary glands acini to make some comparisons as to either they are atrophic or not. I have been using tissue samples formaline fixed in a optic microscope with the programme analySIS from "Soft Imaging System" (www.soft-imaging.net), which allows us to contour the area of each acini and then gives its reading. Do you know of any better method of measuring it? The current method I'm using implies a great deal of subjectivity: depending on the tissue section, the criteria to select the acini and so forth.

Thank you for your attention.
Best regards, Patricia Correia

---------------------------------------------------------------------------

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From: beez1-at-bigpond.com
Date: Wed, 5 Oct 2005 08:17:25 -0500
Subject: [Microscopy] viaWWW: Nikon S-Ke coaxial focusing control microscope

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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (beez1-at-bigpond.com) from on Wednesday, October 5, 2005 at 05:25:37
---------------------------------------------------------------------------

Email: beez1-at-bigpond.com
Name: Rohan Wighton

Organization: Charles Sturt University

Title-Subject: [Filtered] MListserver:

Question: Hi everyone

I have just become the proud owner of a Nikon S-Ke coaxial focusing control type microscope. It has a nikon phase contrast turret. I have several problems, which I list in order of relative importance:

1. I have no transformer for the lamp, and having looked briefly on the net for somewhere to find and buy a replacement, I am beginning to think I might have trouble. Can anyone suggest a contact for this?

2. The knob used to adjust the distance between the eyepieces seems stuck (although the scope is in excellent condition this does not move at all) Will lubrication do the job? If so, what do I use? If not, do I send the scope to an expert?

3. As you may have guessed by now I am a beginner, my most extensive binocular work having been dissecting flowers for a semester (loved it!) Any advice for me and/or some history on my particular model scope would be much appreciated.

Thankyou for taking the time to read this

Rohan

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From: mcauliff-at-umdnj.edu
Date: Wed, 5 Oct 2005 09:24:54 -0500
Subject: [Microscopy] Re: AskAMicroscopist: measuring the size of salivary

Contents Retrieved from Microscopy Listserver Archives
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Get yourself a copy of "Unbiased Sterology" by C.V. Howard and M.G.
Reed. In order to make an accurate assessment of your 'target' you must
get rid of subjectivity in your sampling.

Geoff


patricia.correia-at-kcl.ac.uk wrote:

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From: a.c.richardson-at-durham.ac.uk
Date: Wed, 5 Oct 2005 10:07:14 -0500
Subject: [Microscopy] TEM: Chromium sputter coating

Contents Retrieved from Microscopy Listserver Archives
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Dear All,
We have just taken delivery of a chromium sputter coating unit and I am
attempting to do a risk assessment and having read some of the MDS on
Chromium am now very apprehensive about the toxicity of the fumes and
flakes produced by the target. As I am not a chemist, I am unsure what I
am dealing with. If anyone out there has any advice they would be
willing to share, including things like should it be used in a fume hood
and how to dispose of the 'flakes' of chromium, it would be greatly
appreciated. Thanks in advance,
Christine.

A.C.Richardson
Experimental Officer
School of Biological and Biomedical Science
Centre for Molecular Imaging
University of Durham
Science site
South Rd
Durham
England
E-mail: a.c.richardson-at-durham.ac.uk

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From: gary-at-gaugler.com
Date: Wed, 5 Oct 2005 10:35:59 -0500
Subject: [Microscopy] Re: TEM: Chromium sputter coating

Contents Retrieved from Microscopy Listserver Archives
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My best advice is to use it quickly. I do not know about
toxicity but I do know that Cr oxidizes rapidly. So,
be alert to this. I use Pt, Ir and Au/Pd instead of Cr.

gary g.


At 08:10 AM 10/5/2005, you wrote:



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From: M_Jarnik-at-fccc.edu
Date: Wed, 5 Oct 2005 11:08:51 -0500
Subject: [Microscopy] Re: CPD

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Dear Ben,

Spirillum serpens is a spiral-shaped bacteria from the genus Spirillum, all
of which which live in water (hence the aqua bit) except for one odd species
that causes a type of rat-bite fever in humans (Spirillum minus). The term
spirillum is used generally for any corkscrew-like shaped species of
bacteria.

These Spirilla bacteria stain Gram-negative. The Gram stain is a special
stain used with a lot of bacteria mounted on a glass slide. Bacteria are
often classified as being positive (violet stained) or negative (stained
pink), when viewed under a standard light microscope. This 'Gram stain'
result is due to differences in the cell wall of the bacteria and this can
be important medically e.g. it can affect how effective antibiotics are at
killing them.

Spirillum bacteria move by means of tufts of flagella (wavey hairlike
structures) at each end of the cell. Spirillum serpens is sometimes looked
at in schools for bacteria morphology (shape) studies, presumably because it
is relatively harmless and conviniently lives in water (e.g.
http://heathscientific.net/item.asp?id=115 ). The bacteria Spirillum serpens
should look a bit similar to the nasty Spirillum minus, see :
http://www.ulb.ac.be/sciences/biodic/images/bacterie/spirillumminus.jpg
where it is stained Gram negative (pink).

Further info:
Gram stain pictures of bacteria can be seen at
http://www.ncl.ac.uk/dental/oralbiol/oralenv/tutorials/gramstain.htm
It's a bit technical but the pictures show how to stain a slide that a lot
of bacteria dried onto the surface.

Regards,
Keith

PS. I had a look at my copy of the Bioaerosols Handbook, 1995 CRC Press Inc
(I wrote chapter 11 - Modern microscopicial methods) but these spirella
bacteria aren't covered, probably as they live in water (aqua) not the air
(aero) which I was interested in. I've never looked at them under a
microscope, so I can't add much more than the above, but I expect that has
already told as much as you wanted to know about the Spirilla bacteria.

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk


----- Original Message -----
X-from: {classiccarguy89-at-aol.com}
To: {keith.morris-at-ucl.ac.uk}
Sent: Wednesday, October 05, 2005 2:29 PM

We typically dehydrate our samples (e.g. mouse embryos) in increasing
concentrations of EtOH and then change it to amyl acetate (AAC). This
has three advantages -

a) AAC is less volatile than EtOH - we do not have problems with air
drying samples during transfer
b) supposedly, AAC mixes better with liquid CO2
c) AAC has a specific aroma - it's absence is a good indicator the
sample is ready for CPD.

Michal

edelmare-at-muohio.edu wrote:

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From: kirk-at-UDel.Edu
Date: Wed, 5 Oct 2005 11:34:28 -0500
Subject: [Microscopy] Kodak 4489 TEM film devlopment with Mohr Pro 8

Contents Retrieved from Microscopy Listserver Archives
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Dear Microscopy Listserv:

I have a colleague who who like to correspond with anyone who has successfully used a MOHR PRO
8 "ME-42" film processor for Kodak 4489 TEM film. He'd like to know what
settings (temp, transport speed, develop time etc) are best. Thanks in advance if you can help.

Best Regards, Kirk

Kirk J. Czymmek, Ph.D.
Associate Professor
Department of Biological Sciences
University of Delaware
Newark, DE 19713
kirk-at-udel.edu




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From: Daniel.Salamon-at-nrc-cnrc.gc.ca
Date: Wed, 5 Oct 2005 11:35:10 -0500
Subject: [Microscopy] looking for used PMT

Contents Retrieved from Microscopy Listserver Archives
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Hi everyone,

I am working on designing a new electron detector for our SEM. Does
anyone have an extra PMT with/without a head amplifier? I'm looking for
one that matches the P47 emission spectrum.

If anyone has one just sitting around and gathering dust, I could use it
for experimenting. I would gladly pay for shipping fees.

Thanks,
Daniel Salamon
Technical Officer, Electron Microscopy

National Institute for Nanotechnology, NRC
W6-017A ECERF Bldg, 9107-116 Street
Edmonton, AB. T6G 2V4

Phone: Office (780) 492 8878
Lab (780) 492 8872
DocuFax: (780) 492 8632



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From: walck-at-southbaytech.com
Date: Wed, 5 Oct 2005 11:52:11 -0500
Subject: [Microscopy] re: TEM: Chromium sputter coating

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

There is little to worry about. The nasty Cr is Cr in the hexavalent state (+6). The Cr of your taget is metallic with a thin oxide on it. The natural oxide of Cr is Cr2O3 which means that the Cr is in the +3 state and is bound up with the oxide.

The process of sputtering is physical bombardment of the target with Ar ions that removes the atoms from the near surface of the target. The process is line of sight deposition onto your substrate and metallic Cr is being deposited (valence state is 0). That is why you need a rotating and tilting sample to get a uniform and continuos coating on your sample for high resolution imaging in the SEM. I assume that the flakes that you are talking about are flakes in the deposition chamber. If you are getting flakes of material on your chamber walls, you must be putting down very thick coatings or very many coatings. Our IBS/e sputter coater can put down a uniform, continuous coating that is less than 10 Angstroms. Your coater should be capable of doing the same. If you deposit these types of films, it should take a long time before you start to get flakes in your system which is thick coatings that peel from the walls because of high stresses in the films. Regardless, in the vacuum system, what is deposited is the metal Cr and it oxides to Cr2O3 when exposed to air when you open the chamber. When you clean your chamber and there is dust or flakes, wear a mask and discard the cleaned material as you would a heavy metal. There will be no Cr fumes anywhere. Cr will not be present in the pump exhaust.

As Gary Gaughler said in his reply, Cr does oxidize fairly rapidly, so samples coated with it must be run soon after. The natural protective oxide that forms on Cr is about the thickness of the coating that you want on your sample. When you consider how thin the thickness of the coating is and how long they can be exposed to atmosphere the actual oxidation rate is not all that high. South Bay Technology has just introduced the SampleSaver(TM) storage container to help prevent this and maintain sample in an inert atmosphere. It is generally accepted that Cr coatings give the best results, but Ir and W coatings approach the quality of Cr and are less susceptible to complete film oxidation. Pt, Au, and Au-Pd coatings do not give as fine a grain size as the other coatings.

Disclaimer:
South Bay Technology, Inc. manufactures and sells the IBS/e ion sputter coater and etching system and the SampleSave(TM) storage container.

-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

TEL: +1-949-492-2600
FAX: +1-949-492-1499
walck-at-southbaytech.com

-------- Original Message --------
} From: a.c.richardson-at-durham.ac.uk
} Sent: Wednesday, October 05, 2005 11:12 AM
} To: Walck-at-SouthBayTech.com
} Subject: [Microscopy] TEM: Chromium sputter coating
}
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}
} Dear All,
} We have just taken delivery of a chromium sputter coating unit and I am
} attempting to do a risk assessment and having read some of the MDS on
} Chromium am now very apprehensive about the toxicity of the fumes and
} flakes produced by the target. As I am not a chemist, I am unsure what I
} am dealing with. If anyone out there has any advice they would be
} willing to share, including things like should it be used in a fume hood
} and how to dispose of the 'flakes' of chromium, it would be greatly
} appreciated. Thanks in advance,
} Christine.
}
} A.C.Richardson
} Experimental Officer
} School of Biological and Biomedical Science
} Centre for Molecular Imaging
} University of Durham
} Science site
} South Rd
} Durham
} England
} E-mail: a.c.richardson-at-durham.ac.uk
}
} ==============================Original Headers==============================
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==============================Original Headers==============================
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From: rjpalmer-at-dir.nidcr.nih.gov
Date: Wed, 5 Oct 2005 11:57:19 -0500
Subject: [Microscopy] TEM services

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I am interested in companies/units that do TEM on a "pay-per-play"
basis. I have a small number of bacterial samples on for which
pretty routine workup and picture-snapping is required. Please
contact me off-list.
--
Robert J. Palmer Jr., Ph.D.
Natl Inst Dental Craniofacial Res - Natl Insts Health
Oral Infection and Immunity Branch
Bldg 30, Room 310
30 Convent Drive
Bethesda MD 20892
ph 301-594-0025
fax 301-402-0396

==============================Original Headers==============================
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1, 18 -- Subject: TEM services
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From: fulton.2-at-osu.edu
Date: Wed, 5 Oct 2005 18:35:23 -0500
Subject: [Microscopy] [Filtered] MicroscopyListserverviaWWW: Thanks for info on formvar

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (fulton.2-at-osu.edu) from http://www.microscopy.com/MLFormMail.html on Wednesday, October 5, 2005 at 10:05:10
---------------------------------------------------------------------------

Email: fulton.2-at-osu.edu
Name: Dave Fulton

Organization: OSU/OARDC MCIC

Title-Subject: [Filtered] MListserver:

Question: Fellow liststers,

A very grateful thanks to all who took the time to answer my query concerning the production of formvar coated grids. I saved them all for future reference!
The two suggestions that got my Mojo working were using nose grease (my own) on the slide after cleaning it with EtOH and dipping the slide into the formvar solution and immediately withdrawing and drying it (instead of holding it in the solution for 10 sec and then in the vapor for 30 sec).

---------------------------------------------------------------------------

==============================Original Headers==============================
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7, 13 -- Subject: [Filtered] MicroscopyListserverviaWWW: Thanks for info on formvar
7, 13 -- grids
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From: spb-at-mwrn.com
Date: Wed, 5 Oct 2005 18:36:13 -0500
Subject: [Microscopy] viaWWW: Need Video of Parasites for National Geographic

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (spb-at-mwrn.com) from http://www.microscopy.org/MicroscopyListserver/MLFormMail.html on Wednesday, October 5, 2005 at 12:50:28
---------------------------------------------------------------------------

Email: spb-at-mwrn.com
Name: susanne Pignolet Brandom

Organization: www.microscopy.info

Title-Subject: [Filtered] Need Video of Parasites for National Geographic

Question: Please respond to Video4TV-at-aol.com if you can help.

We are producing a program for National Geographic and are interested in licensing footage of the following:

tapeworm
trichurus
scabies
trachoma.

We apologize for the short notice but we would need to receive broadcast quality footage by this Friday, October 7. If anyone has this footage available for licensing, we would appreciate it!

Thanks so much for your efforts!

Linda Callahan
Creative Differences
11846 Ventura Blvd.
Studio City, CA 91604
(818) 769-7809


---------------------------------------------------------------------------

==============================Original Headers==============================
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From: distall2-at-yahoo.com
Date: Wed, 5 Oct 2005 18:36:46 -0500
Subject: [Microscopy] AskAMicroscopist: microorganisms found with electron microscopes?

Contents Retrieved from Microscopy Listserver Archives
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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (distall2-at-yahoo.com) from http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Wednesday, October 5, 2005 at 10:34:05
---------------------------------------------------------------------------

Email: distall2-at-yahoo.com
Name: masood

Organization: Islamic foundation

Education: 9-12th Grade High School

Location: City, State, Country

Question: what are the latest discovered microorganisms found with electron microscopes?

---------------------------------------------------------------------------

==============================Original Headers==============================
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From: gcc-at-couger.com
Date: Thu, 6 Oct 2005 02:12:55 -0500
Subject: [Microscopy] Re: History - Van Leeuwenhoek Lenses

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html



jbs-at-temple.edu wrote:
}
----------------------------------------------------------------------------

} Hi all,
}
} I was re-reading some catalogues of exhibits of Van Leeuwenhoek
} microscopes, and I was struck, as usual, by the description
of the
} glass lenses that he made for his observations. These
descriptions
} reminded me of a comment that I overheard in passing at a
recent M&M
} meeting that Van Leeuwenhoek also made (or used) lenses made of
} droplets of water. I know that he made a "water microscope",
but I
} always understood this to mean that the sample was liquid,
contained
} in a glass tube. Can anyone provide verification of the use
of water
} as a lens?
}
} Joel
}
}
}
}
Joel

Roger Barker makes a fairly strong case that Van Leeuwenhoek
made and used compound lenses for some of his drawings that
appear to be both theoretically and practically impossible to
resolve with the detail he drew with a single lens in
www.science-info.org/pages/Roger%20Baker/homemade-microscope.pdf

He shows how he made a complex lens using a single lens of glass
and one of glycerine.

Gordon
Gordon Couger

I collect links on information related to light microscopes.
www.couger.com/microscope/links/gclinks.html
Please forward anything you think might be useful to others.
Microscope Documentation is at www.science-info.org


==============================Original Headers==============================
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9, 20 -- References: {200510041444.j94Ei427014881-at-ns.microscopy.com}
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From: paul_hazelton-at-umanitoba.ca
Date: Thu, 6 Oct 2005 09:24:24 -0500
Subject: [Microscopy] Van Leeuwenhoek lenses and microscopes

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

the discussion of Van Leeuwenhoek lenses raises a question of somewhat
personal interest, since i will probably be looking at retiring from the
paid part of the profession in 7-10 years. hey, it's never too early to
think ahead when you have to drop really broad hints in the department.

some years ago we were looking at gifts for a compatriot who was
leaving. we found one company, a purveyor of fine microscope slides for
the student, which marketed silver Van Leeuwenhoek microscopes. the
name was something like North Carolina Bio something, or South Carolina
something-or-other.

does this ring a bell anywhere? can anyone tell me if such a thing
still exists?

i mean, it's either going to be that or a nice Innu sculpture.

paul




Paul R. Hazelton, PhD
Electron Microscope Unit
University of Manitoba
Department of Medical Microbiology
531 Basic Medical Sciences Building
730 William Avenue
Winnipeg, Manitoba, Canada, R3E 0W3
e-mail: paul_hazelton-at-umanitoba.ca
Phone:204-789-3313
Pager:204-931-9354
Cell:204-781-1502
Fax:204-789-3926




==============================Original Headers==============================
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From: wesaia-at-iastate.edu
Date: Thu, 6 Oct 2005 10:07:36 -0500
Subject: [Microscopy] Re: Van Leeuwenhoek lenses and microscopes

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

How about neither North nor South. Try http://www.carolina.com/. It looks
like the place you might be looking for.

Warren

At 09:27 AM 10/06/05, you wrote:

} the discussion of Van Leeuwenhoek lenses raises a question of somewhat
} personal interest, since i will probably be looking at retiring from the
} paid part of the profession in 7-10 years. hey, it's never too early to
} think ahead when you have to drop really broad hints in the department.
}
} some years ago we were looking at gifts for a compatriot who was
} leaving. we found one company, a purveyor of fine microscope slides for
} the student, which marketed silver Van Leeuwenhoek microscopes. the
} name was something like North Carolina Bio something, or South Carolina
} something-or-other.
}
} does this ring a bell anywhere? can anyone tell me if such a thing
} still exists?
}
} i mean, it's either going to be that or a nice Innu sculpture.
}
} paul
}
} Paul R. Hazelton, PhD
} Electron Microscope Unit
} University of Manitoba
} Department of Medical Microbiology

-------------------------------------------
No files should be attached to this message
-------------------------------------------
Warren E. Straszheim, Ph.D.
Materials Analysis and Research Lab
Iowa State University
46 Town Engineering
Ames IA, 50011-3232

Ph: 515-294-8187
FAX: 515-294-4563

E-Mail: wesaia-at-iastate.edu
Web: www.marl.iastate.edu

Scanning electron microscopy, x-ray analysis, and image analysis of materials
Computer applications and networking


==============================Original Headers==============================
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9, 21 -- From: Warren E Straszheim {wesaia-at-iastate.edu}
9, 21 -- Subject: Re: [Microscopy] Van Leeuwenhoek lenses and microscopes
9, 21 -- Cc: paul_hazelton-at-umanitoba.ca
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From: j_dmello-at-yahoo.com
Date: Fri, 7 Oct 2005 03:20:33 -0500
Subject: [Microscopy] SEM Effects on Ear

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

15 DAY AGO I HAVE LOST HEARING TOTALLY,in both ears.
Was using a "In the Ear"(CIC) Digital Hearing Aid (
with Wax buster)
Drs cannot find anything wrong with me Physicallly(
was admitted to hospital for 4 days for all tests)
While I have started work(just completed 25 yrs
service),medicines are going in, still no improvemnet.
Has been working more regularly, with the Jeol 5400
SEM during the past 3 months.Noticed extra battery
dischage in the aid, and lower hearing capacity.Could
it be a cause, of sudden loss of hearing for the last
3 months?
Any of the MSA participants have had this experience?
Kindly let me know, if there is a way out.
Thanks & Regards,

J.J.D'Mello.



__________________________________
Yahoo! Mail - PC Magazine Editors' Choice 2005
http://mail.yahoo.com

==============================Original Headers==============================
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From: wadowska-at-upei.ca
Date: Fri, 7 Oct 2005 06:56:53 -0500
Subject: [Microscopy] TEM diamond knife

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hello,
I was given an old diamond knife. Former user does not know the
specifications of this knife. On it's casing there is an engraving WR
and underneath it MP309. I would like to know what kind of
diamond knife it is (ultrathin, histo etc), is it 35 or 45 degree and
what is it's cutting angle. If anybody can identify it I would be
grateful for the information.
Thanks
Dorota

==============================Original Headers==============================
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From: g.greaves-at-salford.student.ac.uk
Date: Fri, 7 Oct 2005 07:45:49 -0500
Subject: [Microscopy] AskAMicroscopist:TEM of porous silicon samples

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (g.greaves-at-salford.student.ac.uk) from http://www.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Friday, October 7, 2005 at 05:23:35
---------------------------------------------------------------------------

Email: g.greaves-at-salford.student.ac.uk
Name: Graeme Greaves

Organization: University Of Salford

Education: Undergraduate College

Location: Salford, England

Question: I am trying to find information about the preparation of porous silicon samples to be analysed using a transmission electron microscope. What Techniques are there? any knowledge of papers relating to this would be greatly recieved.

yours faithfully

Graeme Greaves

---------------------------------------------------------------------------

==============================Original Headers==============================
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From: Louise_Harner-at-albint.com
Date: Fri, 7 Oct 2005 08:13:51 -0500
Subject: [Microscopy] advice on stereomicroscopes & cameras?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


I've been asked by two co-workers to provide purchasing advice for
stereomicroscopes with digital image capture and continuous zoom of about 1
to 6 - ideally with options to increase/decrease magnification ranges.

One co-worker will be looking at opaque samples - usually rough cut to a
few inches thick and sometimes further polished. The structures he's
examining are varied shades of gray and black, thus lighting options,
control, & reproducibility are important.

The other person will be looking at machined metal parts similar to long,
thick needles with barbs on them. He's interested in measuring angles and
other dimensions as well as seeing imperfections on the parts.

I have trinocular Olympus stereomicroscopes with a variety of lighting and
lens options, and I'm happy with them for my research lab use. I've also
checked out other companies' products via the web. But I'd like some
real-world feedback on other stereomicroscopes - any you are thrilled with?
any you would never buy again? any really good values for the money?


What are the current favorites for digital image capture - consumer,
prosumer, & professional level digital cameras? I prefer at least 3
megapixels (more is always acceptable since the images can be downsized).
Any comments on ease of use, quality, value, & satisfaction from recent
purchasers?


Please respond directly to me at "Louise_Harner-at-albint.com" so we don't tie
up the listserver with personal opinions.
Vendor replies welcome, but please give pricing info. I need to get back to
my co-workers by Oct. 14.

Thanks in advance!

- Louise

Louise Harner
Research Microscopist, Albany International Research Co.
777 West Street, P.O. Box 9114, Mansfield, MA 02048
phone: 508-337-9529
Louise_Harner-at-albint.com


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From: lkrupp-at-us.ibm.com
Date: Fri, 7 Oct 2005 09:45:33 -0500
Subject: [Microscopy] polishing tools by Precision TEM, Inc

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hello listers-

Does anyone have experience with using these tools for cross-sectional TEM
specimen preparation? We are considering purchasing them and I am
interested in opinions on the products. Please respond off-list if you
have any comments for me.

Thank you,
Leslie

Leslie Krupp (Thompson)
IBM Almaden Research
650 Harry Road, K19/D2
San Jose, CA 95120-6099

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From: daniel.thomas-at-univ-rennes1.fr
Date: Fri, 7 Oct 2005 10:31:50 -0500
Subject: [Microscopy] TEM :recovering replicas from mica

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

TEM : PT/C replicas of biological molecules.

I'm having troubles in recovering PT/C replicas on water from freshly
cleaved mica. The carbon film remains sticked to the mica instead of
floating on the water surface. Is there any trick to overcome this trouble ?

Thanks


Daniel

Daniel THOMAS
Interactions Cellulaires et Moléculaires
CNRS, UMR 6026
Université de Rennes 1
Campus de Beaulieu, Bt 13
35042 RENNES Cedex

Tel : 02 23 23 6122
fax : 02 23 23 5048

http://www.sdm.univ-rennes1.fr/












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From: meulia.1-at-osu.edu
Date: Fri, 7 Oct 2005 11:03:12 -0500
Subject: [Microscopy] paraffin sections embedding into plastic

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

We have some paraffin sections on glass slides (silane coated, ems
slides) that we would need to embed into Spurr's resin.

Does anyone have a suggestion on how to separate the glass from the
Spurr's resin blocks? We briefly plunged them into liquid nitrogen,
but we did not get consistent results.

Also, shall we use a different resin?

Thank you.

Tea Meulia


--
***************************************
Tea Meulia
Molecular and Cellular Imaging Center
Ohio State University/OARDC
1680 Madison Ave.
Wooster OH 44691

tel.: 330-263-3836 or -3828
fax: 330-202-3563

http://www.oardc.ohio-state.edu/mcic

*****************************************

==============================Original Headers==============================
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From: tivol-at-caltech.edu
Date: Fri, 7 Oct 2005 11:37:29 -0500
Subject: [Microscopy] Re: TEM :recovering replicas from mica

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


On Oct 7, 2005, at 8:31 AM, daniel.thomas-at-univ-rennes1.fr wrote:

} TEM : PT/C replicas of biological molecules.
}
} I'm having troubles in recovering PT/C replicas on water from freshly
} cleaved mica. The carbon film remains sticked to the mica instead of
} floating on the water surface. Is there any trick to overcome this
} trouble ?

Dear Daniel,
The time I had problems with removing C films from mica, the humidity
was higher than usual.
Yours,
Bill Tivol, PhD
EM Scientist and Manager
Cryo-Electron Microscopy Facility
Broad Center, Mail Code 114-96
California Institute of Technology
Pasadena CA 91125
(626) 395-8833
tivol-at-caltech.edu



==============================Original Headers==============================
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From: walck-at-southbaytech.com
Date: Fri, 7 Oct 2005 11:41:10 -0500
Subject: [Microscopy] advice on stereomicroscopes & cameras?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I purchased several stereomicroscopes in my career. It was always
relatively easy to ask a local representative of the major brands to
bring a unit in for a day or in some cases, a week to try it out with
doing the things that you do with it. It was surprising to me how
different each brand was from one to another in how it felt using it and
how comfortable I was the different units. My suggestion is to make
some calls and book some appointments with your local reps and see what
the consensus is among the different users in the lab after they have
had some hands on with each unit.

-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

US Toll Free: 1-800-728-2233
Tel: (949) 492-2600
Fax: (949) 492-1499

www.southbaytech.com
walck-at-southbaytech.com


-----Original Message-----
X-from: Louise_Harner-at-albint.com [mailto:Louise_Harner-at-albint.com]
Sent: Friday, October 07, 2005 6:19 AM
To: Walck-at-SouthBayTech.com


I've been asked by two co-workers to provide purchasing advice for
stereomicroscopes with digital image capture and continuous zoom of
about 1 to 6 - ideally with options to increase/decrease magnification
ranges.

One co-worker will be looking at opaque samples - usually rough cut to a
few inches thick and sometimes further polished. The structures he's
examining are varied shades of gray and black, thus lighting options,
control, & reproducibility are important.

The other person will be looking at machined metal parts similar to
long, thick needles with barbs on them. He's interested in measuring
angles and other dimensions as well as seeing imperfections on the
parts.

I have trinocular Olympus stereomicroscopes with a variety of lighting
and lens options, and I'm happy with them for my research lab use. I've
also checked out other companies' products via the web. But I'd like
some real-world feedback on other stereomicroscopes - any you are
thrilled with? any you would never buy again? any really good values for
the money?


What are the current favorites for digital image capture - consumer,
prosumer, & professional level digital cameras? I prefer at least 3
megapixels (more is always acceptable since the images can be
downsized). Any comments on ease of use, quality, value, & satisfaction
from recent purchasers?


Please respond directly to me at "Louise_Harner-at-albint.com" so we don't
tie up the listserver with personal opinions. Vendor replies welcome,
but please give pricing info. I need to get back to my co-workers by
Oct. 14.

Thanks in advance!

- Louise

Louise Harner
Research Microscopist, Albany International Research Co.
777 West Street, P.O. Box 9114, Mansfield, MA 02048
phone: 508-337-9529
Louise_Harner-at-albint.com


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From: larry-at-cymru.freewire.co.uk
Date: Fri, 7 Oct 2005 11:45:23 -0500
Subject: [Microscopy] Re: AskAMicroscopist:TEM of porous silicon samples

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

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Have you actually tried any standard methods yet? And if so, what
were the problems? What is the initial form of your samples? How are
the pores created and what size are they?? Are the samples amorphous,
polycrystalline or single crystal? If single crystal, what
orientation?

I don't have personal experience of this material but methods I would
try include:

1. Mechanical pre-preparation - diamond saw, ultrasonic disc cutter,
grinding and polishing to get 3 mm discs, ~500 um thick, dimple
grinder then ion thin.

2. If the ion thinning destroys the pore structure, then it may be
possible to mechnically polish with a dimple grinder to electron
transparency. Si becomes transparent to light when very thin. This
can be used to control the final dimple polishing.

3. Easiest method, if pores are small, might be to break and grind
the Si until very fine, disperse in ethanol and dry down onto a C
support film on a grid.

--
Larry Stoter
JEOL (UK) Ltd
tel: +44-(0)1707-377117, fax: +44-(0)1707-373254, e-mail: larrys-at-jeoleuro.com

PLEASE NOTE
1. Any mail other than plain text will be automatically deleted.
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From: W.Muss-at-salk.at
Date: Fri, 7 Oct 2005 11:54:33 -0500
Subject: [Microscopy] AW: paraffin sections embedding into plastic

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Good afternoon,
dear Tea,

unfortunately at the moment I can't find the respective file dealing with
the } POP-OFF {-technique I used for long time earlier(1980-1990ies), so I
would like to inform you of a website-document you can read after for this
"technique".

You can find this paper at
http://www.ebsciences.com/papers/large_block.htm (scrolling down to the
section "POP-OFF-Technique").
For your convenience I have pasted in here the text:

citation } A size 3 BEEM capsule is filled with liquid resin until it is
slightly concave. The capsule is inverted quickly, placed over the
etched/marked area, and polymerized according to the plastic used. Lowicryl
sections pop off best with a resin mixture using half the amount of BEE.
Polymerized capsules are popped off the glass slides by dipping them
quickly in and out of a dewar containing liquid nitrogen (they must not be
frozen too long). Capsules will be easily lifted off. The pop-off capsules
are stained in 1.0% methylene blue at room temperature for 30 to 60
seconds, rinsed in distilled water, and dried. The capsules are examined
under a light microscope (condenser down) to determine the flatness of the
etched tissue section embedded in the pop-off's surface. If the etched area
is uniformly stained and appears in one plane of focus, it is suitable for
thin sectioning. { {End of quote

The separation of (WELL/THOROUGHLY impregnated [former] paraffin sections
reeembedded into and then polymerized resin [IMO it doesn't matter if epoxy
or acrylic one's] everytimes in my experience was tricky and not every
section/slide behaved in a same/similar manner concerning separation
(tendencies).....

Usually, you will have to mount an empty resin block over the section at
the location desired (I never heard or read about separating a whole
section from the glass-slide without decreasing area and mounting - if you
like - one or more blank resin blocks on the slide).
After polymerisation of the blocks in position over the chosen location you
better scratch the edges around the block-section contact with a sharp
scalpel.

The "trick" is - IMO - NOT to plunge the whole slide INTO liquid nitrogen,
BUT -instead - only to place the slide e.g. 1 mm ABOVE the LN2, and finally
(after 1-2 seconds of having done so to reduce thermal capacity of the
glass slide) to get the slide with its lower surface ON to the LN2 surface.

You will see "freezing" of the slide (last time point for you: when the
thicker edges of the mounted resin blocks get white !):
THEN:
either you will "hear" a "pop" (this } popping { gave the name to the
technique) or not: if the latter occurs, try to push the block by your
fingers in a +/- horizontal direction. Sometimes it is necessary to try
that procedure several times.

If you don't have a positive result (a likely result for silane coated
slides), try - as a last trial for rescue - the following:
before performing the pop-off technique on LN2 surface, place the slide
with its resin blocks mounted into the oven at -say- 90 degrees C for 15
min or so, then transfer as quickly as possible to the cold LN2 surface....

Physical Mechanism (as to my knowledge): it is clear that the different
thermal capacity of the glass slide and the resin blocks/section on the
other hand will result in different expansion properties (extension
modulus) if cooled down to - 196 degrees C. Therefore it is necessary to
get a very cold glass slide, but instead a more/less "warm" resin block
boundary of the reembedded section.


Hope this helps,
Best wishes and regards

Wolfgang Muss

Personal Communication Data:
OR Dr. Wolfgang Muss Member of
EM-Lab
Institute of Pathology, SALK
(Salzburger Landeskliniken gemeinnuetzige GesmbH)
Muellner Hauptstrasse 48
A-5020 SALZBURG AUSTRIA/EUROPE

and/or/alternatively

Paracelsus Medical Private University (PMU)
Institute of Pathology
Electron Microscopy Lab
Muellner Hauptstrasse 48
A-5020 SALZBURG, Austria/Europe
Phone work: +43+662+4482+4720
Mobile phone work:+43+662+4482-57704
Fax-No. at work: ++43+662+4482-882 ext (please, only by indicating: "c/o
W.Muss")
E-Mail work: W.Muss-at-SALK.at

Mobile-phone private: ++43+676+5 369-456
E-Mail private: wij.Muss-at-aon.at
------------------------------------------------------------------------
--------------------------------------
Ankuendigung namens der (Information on behalf of)
Society for Cutaneous Ultrastructure Research (SCUR)
PLEASE VISIT THE UPDATED WEBSITE of SCUR at
} http://www.scur.org {
-------------------------------------------------------------------------
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33rd Annual Meeting of the SCUR, 8th-10th June, 2006, WARSZAW, Poland
Preliminary informations: send an E-Mail
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Czech Republic

35th Annual Meeting of the SCUR, 11th -12th May, 2008, NARA or KYOTO, Japan
Joint Meeting with the
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----------
Von: meulia.1-at-osu.edu[SMTP:meulia.1-at-osu.edu]
Antwort an: meulia.1-at-osu.edu
Gesendet: Freitag, 07. Oktober 2005 18:08
An: W.Muss-at-salk.at
Betreff: [Microscopy] paraffin sections embedding into plastic




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The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

We have some paraffin sections on glass slides (silane coated, ems
slides) that we would need to embed into Spurr's resin.

Does anyone have a suggestion on how to separate the glass from the
Spurr's resin blocks? We briefly plunged them into liquid nitrogen,
but we did not get consistent results.

Also, shall we use a different resin?

Thank you.

Tea Meulia


--
***************************************
Tea Meulia
Molecular and Cellular Imaging Center
Ohio State University/OARDC
1680 Madison Ave.
Wooster OH 44691

tel.: 330-263-3836 or -3828
fax: 330-202-3563

http://www.oardc.ohio-state.edu/mcic

*****************************************

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From: lcgould-at-med.cornell.edu
Date: Fri, 7 Oct 2005 12:06:47 -0500
Subject: [Microscopy] Re: paraffin sections embedding into plastic

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Tea,
Separating sections from plain glass slides, or even the old
fashioned albumin or gelatin coated slides usually worked pretty well
using the liq. nitrogen method. Silanized slides (or "plus" slides)
seem to be a whole 'nother animal. The treatment is designed to keep
the sections on the slide...and it does.
I suppose you could try etching away the glass with HF...but that is
very dangerous and not a step to take lightly. If you do go that
route, I would use a diamond scribe to etch and break the slide as
close to the block face at possible in order to minimize both the
amount of HF needed, and the time to dissolve the glass.
If you think you need to use HF, contact me off-list and I will
regale you with precautions to take.
Lee



--
Leona Cohen-Gould, M.S.
Sr. Staff Associate
Director, Electron Microscopy & Histology Core Facility
Manager, Optical Microscopy Core Facility
Joan & Sanford I. Weill Medical College
of Cornell University
voice (212)746-6146
fax (212)746-8175

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From: walck-at-southbaytech.com
Date: Fri, 7 Oct 2005 12:54:54 -0500
Subject: [Microscopy] Re: AskAMicroscopist:TEM of porous silicon samples

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I would definitely add the small angle cleavage technique to the
standard technique (aka MicroCleave(TM) technique) for this. If you
need information on this technique, please visit our website and look up
application notes associated with the Model 520.

I've seen cross sections of porous silicon samples in the literature and
it didn't appear that they had done anything different. The epoxies
that are used should infiltrate the porous silicon fairly well. You
should be able to use ay of the standard techniques for cross section
sample prep. A number of application notes are available on our web
site that describe these techniques.

-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

US Toll Free: 1-800-728-2233
Tel: (949) 492-2600
Fax: (949) 492-1499

www.southbaytech.com
walck-at-southbaytech.com

Disclaimer: South Bay Technology manufactures and sells the
MicroCleave(TM) and the full complement of TEM sample preparation
equipment.


-----Original Message-----
X-from: larry-at-cymru.freewire.co.uk [mailto:larry-at-cymru.freewire.co.uk]
Sent: Friday, October 07, 2005 9:49 AM
To: Walck-at-SouthBayTech.com

} -----------------------------------------------------------------------
} -----
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of
America

Have you actually tried any standard methods yet? And if so, what
were the problems? What is the initial form of your samples? How are
the pores created and what size are they?? Are the samples amorphous,
polycrystalline or single crystal? If single crystal, what
orientation?

I don't have personal experience of this material but methods I would
try include:

1. Mechanical pre-preparation - diamond saw, ultrasonic disc cutter,
grinding and polishing to get 3 mm discs, ~500 um thick, dimple
grinder then ion thin.

2. If the ion thinning destroys the pore structure, then it may be
possible to mechnically polish with a dimple grinder to electron
transparency. Si becomes transparent to light when very thin. This
can be used to control the final dimple polishing.

3. Easiest method, if pores are small, might be to break and grind
the Si until very fine, disperse in ethanol and dry down onto a C
support film on a grid.

--
Larry Stoter
JEOL (UK) Ltd
tel: +44-(0)1707-377117, fax: +44-(0)1707-373254, e-mail:
larrys-at-jeoleuro.com

PLEASE NOTE
1. Any mail other than plain text will be automatically deleted. 2. Any
mail, legitimate or not, apparently or actually from hotmail,
netscape, yahoo or excite will automatically be deleted.
3. Mail with no subject or without a clear subject will be ignored :-)

==============================Original
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From: eschumacher-at-mccrone.com
Date: Fri, 7 Oct 2005 13:05:25 -0500
Subject: [Microscopy] Student Poster Competition - MMMS Meeting March 24, 2006

Contents Retrieved from Microscopy Listserver Archives
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STUDENT POSTER COMPETITION ANNOUNCEMENT

To be held in conjunction with the March 24, 2006 meeting of the Midwest

Microscopy and Microanalysis Society

Affiliate of the Microscopy Society of America and the Microbeam
Analysis
Society of America

ABSTRACT DEADLINE: Abstracts must be received in electronic format by
5PM,
Friday, December 16, 2005.

The first quarter meeting of the Midwest Microscopy and Microanalysis
Society will be held on Friday, March 24, 2006, in the Pancoe Life
Sciences
Building, Northwestern University, Evanston, Illinois. A student poster

competition open to undergraduate and graduate students will be held in
conjunction with the meeting. Posters should illustrate utilization of
microscopy for either biological or materials science study. Prizes
will be
awarded as follows:

$300 for 1st place
$200 for 2nd place
$100 for 3rd place

Abstracts must be received in electronic format by 5PM on Friday,
December 16, 2005. To be eligible for a prize, you must be first author
on
the poster, and you must be present at the meeting. You are encouraged
to
submit your entry as early as possible, as space may be limited.
Abstracts
from last year's competition, and an example of the judging worksheet
can be
found on the MMMS website:


http://northwestern.edu/bioimaging/MMMS%20Website/index.htm.

Further details will be provided upon acceptance of your submission.

Please send the following information to the email address below, and
attach
your abstract as a Word document:

Name Phone number
Affiliation Email address
Mailing address

Send to:

Elaine Schumacher
MMMS Materials Science Director
McCrone Associates, Inc.
850 Pasquinelli Drive
Westmont, IL 60559-5539
Tel: 630-887-7100 Fax: 630-887-7417
Email: eschumacher-at-mccrone.com


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From: geil-at-uiuc.edu
Date: Fri, 7 Oct 2005 15:50:06 -0500
Subject: [Microscopy] TEM, replica removal

Contents Retrieved from Microscopy Listserver Archives
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Dear Daniel:
We routinely remove Pt/C replicas or shadowed samples of
polymers, from mica or glass cover slips, after also coating with
vertically coated C, by floating on dilute (ca 1%) HF, taking all the
necessary HF use precautions. The sample can be picked up on the
grid, and either touched to a paper tissue or refloated on water to
remove any residual HF.
If any questions let me know.
Regards,
Phil Geil
--


Phillip H. Geil; Ph. 217-333-0149 Fax 217-333-2736
Department of Materials Science and Engineering
University of Illinois
1304 W. Green St.
Urbana, IL 61801

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From: abowling-at-mail.utexas.edu
Date: Sat, 8 Oct 2005 00:08:13 -0500
Subject: [Microscopy] Re: TEM: recovering replicas from mica

Contents Retrieved from Microscopy Listserver Archives
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If you have used an electrostatic glue (i.e. poly-L-lysine) the replica
will NOT separate from the mica without using HF (in my experience). If
you do use HF to remove the replica, I would recommend using a glass rod
(yes, glass) to remove the replica to distilled water before picking up
on a grid. You just touch the rod to the surface of the liquid and
"roll" the replica up onto the rod and "unroll" it onto the surface of
the water. I feel this minimizes the stress to the replica. This
method was mentioned in a paper by John Heuser but unfortunately I don't
have the citation for you. (I made a platinum/carbon replica on a
poly-L-lysine-coated glass coverslip and removed the replica onto
full-strength HF just a few hours ago, so I know that works!)

On an HF-free note, in the book "Negative Staining and Cryoelectron
Microscopy", Robin Harris recommends letting carbon films evaporated
onto mica sit overnight before attempting to float them off onto water.
As a possible means to avoid waiting overnight, Harris suggests placing
the mica into a petri dish on some damp filter papers for a few hours.
Perhaps this might be enough to get your replicas to float.

Good luck!

Andrew Bowling
post-PhD but pre-Postdoc
The University of Texas
Austin, Texas



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From: klk-at-biotech.ufl.edu
Date: Mon, 10 Oct 2005 15:01:27 -0500
Subject: [Microscopy] Doul Layer DVD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Masood,

Generally micro-organisms aren't discovered using the electron microsope.
They are normally taken from their natural habitat, such as soil, the air,
blood and so forth, and may be grown ('cultured') in special media that
contains the nutrients they need to survive. The media may be an Agar plate
(a jelly or jello like material ) or a soupy broth liquid. The single
celled organisms divide in this producing millions of cells (and hopefully
all of the type you want). Viruses are more complicated as they require a
cell to replicate in. Once there are plenty of micro-organisms in the
culture they can be harvested and treated for viewing under the light or
electron microscope. Light microscopy is, with the use of special cellular
stains, is still very important for micro-organism identification.
Once isolated and cultured we can also study them to see how they live
and how to kill them if they are dangerous.

So normally the micro-organisms would be discovered by these traditional
collection, isolation and culturing techniques. Naturally we know most about
micro-organisms that are medically important, i.e. those that cause disease,
allergic reactions or are beneficial to us.

Have a browse through the light blue section of this (UK) link:
http://www.biotopics.co.uk/conten.html#ecology

Some pretty scanning (surface) electron microscope images are here:
http://www.pbrc.hawaii.edu/bemf/microangela/

When using electron microscopes, sometimes micro-organisms may be discovered
when viewing other material, such a plant & animal tissues or cells, e.g.
http://www.sunderland.ac.uk/~es0man/tem1.htm

In many cases new micro-organisms are 'discovered' after a new infectious
disease is identified or during research into a well known disease or
investigating things like soil fertility or the safety of drinking water or
the transfer of disease via the air. However scientists are also interested
in how the micro-organisms live rather just their appearance as seem under
electron microscope. You can use special stains (often heavy metals) under
the transmission electron microscope to highlight intra-cellular cell
structures.

A 'newly' discovered micro-organism is:
http://www.eurekalert.org/pub_releases/1996-09/ORNL-NDBP-170996.php

Regards

Keith
----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk






[----- Original Message -----

X-from: {distall2-at-yahoo.com}
To: {keith.morris-at-ucl.ac.uk}
Sent: Thursday, October 06, 2005 12:47 AM

Hello All,

What is a doul layer dvd?

And no, I don't believe that is "dual" misspelled.

--
Karen L. Kelley
ICBR Electron Microscopy Manager
University of Florida
ICBR Electron Microscopy Core Lab
Bartram Hall Room 214
Box 118525 Gainesville Florida
Lab: 352-392-1184 fax: 352-846-0251
Email: klk-at-biotech.ufl.edu
Southeastern Microscopy Society Treasurer
http://www.biotech.ufl.edu/EM/



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From: grb-at-ufl.edu
Date: Mon, 10 Oct 2005 15:28:00 -0500
Subject: [Microscopy] Re: Doul Layer DVD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


I bet you a beer, payable at the New Zealand Microscopy conference early in
2007, that it is, in fact, either a typo or a manifestation of illiteracy.

cheers

rtch

Date sent: Mon, 10 Oct 2005 15:03:13 -0500
To: r.sims-at-auckland.ac.nz
X-from: klk-at-biotech.ufl.edu
Send reply to: klk-at-biotech.ufl.edu

That is a DVD that hold 'too' times the information of a standard dvd.

klk-at-biotech.ufl.edu wrote:

} ----------------------------------------------------------------------------
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--
Gerald Bourne
Major Analytical Instrumentation Center
Department of Materials Science and Engineering
University of Florida
107H MAEC
P.O. Box 116400
Gainesville, FL 32611
(352) 392-6985
(352) 392-0390 fax


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From: gvrdolja-at-nature.berkeley.edu
Date: Mon, 10 Oct 2005 15:45:21 -0500
Subject: [Microscopy] oil filters

Contents Retrieved from Microscopy Listserver Archives
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Hello,
I need to order some oil filters and odor element for two Edwards rotary
pumps (RV8). The elements go into a housing known as an EMF10. Does
anyone have an inexpensive source for these? I've seen a price of $220
for one oil filter and odor filter. Any advice appreciated.

Thanks

\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\
Gordon Ante Vrdoljak Electron Microscope Lab
AOL/IM rakhasha http://nature.berkeley.edu/~gvrdolja 26 Giannini Hall
gvrdolja-at-nature.berkeley.edu UC Berkeley
phone (510) 642-2085 Berkeley CA 94720-3330
fax (510) 643-6207 cell (510) 290-6793

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From: Bede.Willenbring-at-hbfuller.com
Date: Mon, 10 Oct 2005 17:12:40 -0500
Subject: [Microscopy] Re: Doul Layer DVD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Actually, I believe it is a misspelling. If it is, it's the latest flavor of optical recording media (but not the last). They actually record on two separate layers (hence dual) on the same side of the disc.

If you dying to know the details, everything you never wanted to know about CDs' and DVD's can be had at

http://www.clir.org/pubs/reports/pub121/contents.html

The document itself is an evaluation of the life expectancy of optical media. But it contains a very understandable description of the various types of optical disk.



Bede Willenbring
Research Chemist
H.B. Fuller Company

E-mail: Bede.Willenbring-at-HBFuller.com
Phone: 651-236-5470
Fax: 651-236-5020
Correspondence: P.O. Box 64683, St. Paul, MN 55164-0683

} } } {klk-at-biotech.ufl.edu} 10/10/05 3:04 PM } } }



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Hello All,

What is a doul layer dvd?

And no, I don't believe that is "dual" misspelled.

--
Karen L. Kelley
ICBR Electron Microscopy Manager
University of Florida
ICBR Electron Microscopy Core Lab
Bartram Hall Room 214
Box 118525 Gainesville Florida
Lab: 352-392-1184 fax: 352-846-0251
Email: klk-at-biotech.ufl.edu
Southeastern Microscopy Society Treasurer
http://www.biotech.ufl.edu/EM/



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From: paul_hazelton-at-umanitoba.ca
Date: Mon, 10 Oct 2005 21:57:29 -0500
Subject: [Microscopy] thanks re Van Leeuwenhoek lenses and microscopes

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

to all who responded to my plaintif plea, thanks. you were all correct. unfortunately, the company no longer carries their line of historical objects. but i did get some interesting information. seems the microscopes were a labour of love by an "old doctor in Chicago" who custom made the replicas. they were full size, working models in steriling silver. the company purchased 4 to see if they would be a seller, but no-one took them up on them. eventually they were sold off. the person who made the instruments is apparently "no longer with us, he's gone on...." in the words of the source.

suppose i should give recognition to Carolina Biological and their 30year employee/microscope expert who passed the information on.

oh, and phil - the other companies were a good thought, but they couldn't help. one did suggest i contact an antique dealer. i don't even want to think what an original would cost. not even if i won your Power Ball lottery that you guys run in some of the states.....

paul

Paul R. Hazelton, PhD
Electron Microscope Unit
University of Manitoba
Department of Medical Microbiology
531 Basic Medical Sciences Building
730 William Avenue
Winnipeg, Manitoba, Canada, R3E 0W3
e-mail: paul_hazelton-at-umanitoba.ca
Phone:204-789-3313
Pager:204-931-9354
Cell:204-781-1502
Fax:204-789-3926

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From: tylko-at-zuk.iz.uj.edu.pl
Date: Tue, 11 Oct 2005 02:14:58 -0500
Subject: [Microscopy] thanks re vacuum pumps and LaB6

Contents Retrieved from Microscopy Listserver Archives
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I would like to thank everyone who replied to my questions concerning vacuum
and electron gun modification.
Regards,

Dr Grzegorz Tylko
Department of Cytology and Histology
Institute of Zoology
Jagiellonian University
ul. Ingardena 6
30-060 Krakow
fax: +48-12-634-49-51
phone: +48-12-633-63-77 ext. 2425
mobile phone: +48-602-535-041
e-mail: tylko-at-zuk.iz.uj.edu.pl


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From: David.Patton-at-uwe.ac.uk
Date: Tue, 11 Oct 2005 02:48:32 -0500
Subject: [Microscopy] Re: Doul Layer DVD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Can I join in the fun? Bon Jovi are releasing a Dual disc soon.
Apparently it is a CD one side and a DVD on the other. Yippee - I would
also like my computer to play 7" singles.

Dave

-----Original Message-----
X-from: Bede.Willenbring-at-hbfuller.com
[mailto:Bede.Willenbring-at-hbfuller.com]
Sent: 10 October 2005 23:20
To: David Patton

Actually, I believe it is a misspelling. If it is, it's the latest
flavor of optical recording media (but not the last). They actually
record on two separate layers (hence dual) on the same side of the disc.

If you dying to know the details, everything you never wanted to know
about CDs' and DVD's can be had at

http://www.clir.org/pubs/reports/pub121/contents.html

The document itself is an evaluation of the life expectancy of optical
media. But it contains a very understandable description of the various
types of optical disk.



Bede Willenbring
Research Chemist
H.B. Fuller Company

E-mail: Bede.Willenbring-at-HBFuller.com
Phone: 651-236-5470
Fax: 651-236-5020
Correspondence: P.O. Box 64683, St. Paul, MN 55164-0683

} } } {klk-at-biotech.ufl.edu} 10/10/05 3:04 PM } } }



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Hello All,

What is a doul layer dvd?

And no, I don't believe that is "dual" misspelled.

--
Karen L. Kelley
ICBR Electron Microscopy Manager
University of Florida
ICBR Electron Microscopy Core Lab
Bartram Hall Room 214
Box 118525 Gainesville Florida
Lab: 352-392-1184 fax: 352-846-0251
Email: klk-at-biotech.ufl.edu
Southeastern Microscopy Society Treasurer
http://www.biotech.ufl.edu/EM/



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From: christophe.leterrier-at-espci.fr
Date: Tue, 11 Oct 2005 03:09:43 -0500
Subject: [Microscopy] Re: Doul Layer DVD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Guess it's a "dull" layer DVD... Seems kinda crappy

Christophe

Le 10 oct. 05, à 22:05, klk-at-biotech.ufl.edu a écrit :

}
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} Hello All,
}
} What is a doul layer dvd?
}
} And no, I don't believe that is "dual" misspelled.
}
} --
} Karen L. Kelley
} ICBR Electron Microscopy Manager
} University of Florida
} ICBR Electron Microscopy Core Lab
} Bartram Hall Room 214
} Box 118525 Gainesville Florida
} Lab: 352-392-1184 fax: 352-846-0251
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From: W.Muss-at-salk.at
Date: Tue, 11 Oct 2005 03:16:28 -0500
Subject: [Microscopy] Re: Doul Layer DVD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hello and good morning all,

Just only } supplementary {, what I found:


http://www.dvd12.info//dvd-13.html
scroll down, left link-bar-area, Press (Control&letterF) (FIND-Function
,search for } doul {) you will find the term (& LINK bar) "Doul Layer DVD"
but no further explanation exept "Double Layer DVD"

Also on
http://nessmp3.com/forums/index.php?showtopic=579
with the } find function { (Ctrl&letter F) and searching for } doul {:

you will find:

..........} Doul Layer DVD's { right now in my opinion are just a waste of
money. You need a player that supports the format and they cost big $$$.
I'de wait a few years before that investment. I know most burners support
it right now but do you want to shorten the life of your burner to watch a
movie anyway? {

Seems to be an insiders' "short cut" for Double layer DVD ?...Thanks for
the question, I haven't heared anything about such new recording medium
until now...interesting....

regards,
Wolfgang Muss
SALK (Salzburger Landeskliniken GesmbH)
Paracelsus Medical Private University (PMU)
Institute of Pathology
Electron Microscopy Lab
Muellner Hauptstrasse 48
A-5020 SALZBURG, Austria/Europe
Phone work: +43+662+4482+4720
Mobile phone work:+43+662+4482-57704
Fax-No. at work: ++43+662+4482-882 ext (please, only by indicating: "c/o
W.Muss")
E-Mail work: W.Muss-at-SALK.at
Mobile-phone private: ++43+676+5 369-456
E-Mail private: wij.Muss-at-aon.at



----------
Von: David.Patton-at-uwe.ac.uk[SMTP:David.Patton-at-uwe.ac.uk]
Antwort an: David.Patton-at-uwe.ac.uk
Gesendet: Dienstag, 11. Oktober 2005 09:52
An: W.Muss-at-salk.at
Betreff: [Microscopy] Doul Layer DVD




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Can I join in the fun? Bon Jovi are releasing a Dual disc soon.
Apparently it is a CD one side and a DVD on the other. Yippee - I would
also like my computer to play 7" singles.

Dave

-----Original Message-----
X-from: Bede.Willenbring-at-hbfuller.com
[mailto:Bede.Willenbring-at-hbfuller.com]
Sent: 10 October 2005 23:20
To: David Patton

Actually, I believe it is a misspelling. If it is, it's the latest
flavor of optical recording media (but not the last). They actually
record on two separate layers (hence dual) on the same side of the disc.

If you dying to know the details, everything you never wanted to know
about CDs' and DVD's can be had at

http://www.clir.org/pubs/reports/pub121/contents.html

The document itself is an evaluation of the life expectancy of optical
media. But it contains a very understandable description of the various
types of optical disk.



Bede Willenbring
Research Chemist
H.B. Fuller Company

E-mail: Bede.Willenbring-at-HBFuller.com
Phone: 651-236-5470
Fax: 651-236-5020
Correspondence: P.O. Box 64683, St. Paul, MN 55164-0683

} } } {klk-at-biotech.ufl.edu} 10/10/05 3:04 PM } } }



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The Microscopy ListServer -- CoSponsor: The Microscopy Society of
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Hello All,

What is a doul layer dvd?

And no, I don't believe that is "dual" misspelled.

--
Karen L. Kelley
ICBR Electron Microscopy Manager
University of Florida
ICBR Electron Microscopy Core Lab
Bartram Hall Room 214
Box 118525 Gainesville Florida
Lab: 352-392-1184 fax: 352-846-0251
Email: klk-at-biotech.ufl.edu
Southeastern Microscopy Society Treasurer
http://www.biotech.ufl.edu/EM/



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From: gcc-at-couger.com
Date: Tue, 11 Oct 2005 03:33:49 -0500
Subject: [Microscopy] Re: thanks re Van Leeuwenhoek lenses and microscopes

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html



paul_hazelton-at-umanitoba.ca wrote:

} to all who responded to my plaintif plea, thanks. you were
all correct. unfortunately, the company no longer carries their
line of historical objects. but i did get some interesting
information. seems the microscopes were a labour of love by an
"old doctor in Chicago" who custom made the replicas. they were
full size, working models in steriling silver. the company
purchased 4 to see if they would be a seller, but no-one took
them up on them. eventually they were sold off. the person who
made the instruments is apparently "no longer with us, he's gone
on...." in the words of the source.
}
} suppose i should give recognition to Carolina Biological and
their 30year employee/microscope expert who passed the
information on.
}
} oh, and phil - the other companies were a good thought, but
they couldn't help. one did suggest i contact an antique
dealer. i don't even want to think what an original would cost.
not even if i won your Power Ball lottery that you guys run in
some of the states.....
}
Hi Paul,

Commissioning some one to build a few might not be too expensive
if you can find the right person. To be authentic they are have
to almost be made one off any way. Brass or copper would be more
authentic than silver and take on a more pleasing patina with
age. If you hurry copper will cost less than silver:{

Gordon
Gordon Couger

I collect links on information related to light microscopes.
www.couger.com/microscope/links/gclinks.html
Please forward anything you think might be useful to others.
Microscope Documentation is at www.science-info.org


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From: pgrover-at-bilbo.bio.purdue.edu
Date: Tue, 11 Oct 2005 09:14:41 -0500
Subject: [Microscopy] thanks re Van Leeuwenhoek microscope

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

X-from a quick search of the web doul layer is obviously a misspelling of dual
layer (e.g. Chitty Chitty Bang Bang on doul layer disk - I don't think so).
Dual layer where the laser can actually write to two dye layers on one side
of the disk. This doubles the capacity of the disk from 4.7Gb to 9.4Gb and
is the reason DVD film copying requires a great deal of time to compress the
9.4Gb into 4.7Gb of a -R or +R standard single layer DVD - up to 8 hours
(whereas decrypting the copyright protection takes a few minutes).

With regard to backing up important scientific data, you should be aware
that archived CD-Rs should be 're-backuped' up to new media every three to
five years. Unbranded CD's that have little quality control should be
avoided or re-backed up within 6 months of writing. Use datasafe pens (if
anything) for writing on the label surface (solvent based 'sharpies' aren't
recommended at all, especially the manufacturer), as the CD label surface is
actually where the read/write dye is located. Store crucial archived CDs or
DVD's in solid tough polythene cases, although paper CD sleeves are fine if
handled carefully. Avoid all-polythene clear flexible sleeves of the type
often sent out with free CD's as these definitely do gradually damage the CD
surface by rubbing.

Of the DVD's only DVD RAM is safe for storage up to 100 years and 300,000
re-writes (especially in its protective caddy) - although the format is
difficult to source as a drive these days in its caddy version and the lack
of a recovery drive may become a problem in the future. The 'drag&drop'
4.7Gb DVD-RAM can be removed from the caddy or purchased as plain non-caddy
disks. LG make excellent non caddy DVD-RAM/-R/+R multiwriters. DVD RAM,
being read/write erasable, are very slow to write to though.

DVD dual layer, -R & +Rs are great for film and TV archives where a scratch
may just result in the odd dropped frame and at worst a trip to the mall to
buy another copy. However that could be your precious image or data file.
DVD -R and +Rs scratch very easily, even when stacking or dropping onto
carpet, so although they are certainly far better than nothing, all
computers in our imaging suite use DVD RAM cartridge drives as well as DVD-R
and CD for crucial data. If possible keep another copy of crucial data on a
PC hard drive as well (they are so cheap per Gb these days and relatively
reliable). Internal hard drives are less likely to suffer from shock
(dropping them or things onto them), which is particularly a problem when
active with the head unparked (causing the HD head to crash onto the disk
surface when read/writing). Secondary internal hard drives are very easy to
fit - but keep to one manufacturer. Personally I would avoid dual layer
DVD's at the moment as they are really for hi-definition film, are expensive
per Gb, and their complexity may lead to data loss in the future (early CD's
have already failed due to the printing ink of the label gradually etching
into the dye layer).

Always backup with proper backup software such as Nero backItUp where the
data is verified as an exact copy of the original file. I never compress
files, and large zipped directories frequently corrupt. Personally I always
avoid any type of tape backup system, as whenever I have tried to recover
lost data the tape archive has been 'corrupted' and I have had to recover
data from a standard floppy disk or CD. I keep backup DVD's of my home data
at work and visa-versa.

Regards

Keith

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk
----- Original Message -----
X-from: {Bede.Willenbring-at-hbfuller.com}
To: {keith.morris-at-ucl.ac.uk}
Sent: Monday, October 10, 2005 11:19 PM

I like to add to add the following link for those who are interested in food and other micro-organisms under electron microscopes.
http://www.magma.ca/~scimat/


Ann Fook Yang
EM Unit/ Unite EM
AAFC/AAC
960 Carling Ave,
Ottawa,Ontario
Canada K1A 0C6
yanga-at-agr.gc.ca
Telephone/Téléphone: 613-759-1638
Facsimile/Télécopieur: 613-759-1701

Agriculture and Agri-Food Canada - Agriculture et Agroalimentaire Canada

-----Original Message-----
X-from: keith.morris-at-ucl.ac.uk [mailto:keith.morris-at-ucl.ac.uk]
Sent: Monday, October 10, 2005 6:35 AM
To: Yang, Ann-Fook

Dear Masood,

Generally micro-organisms aren't discovered using the electron microsope.
They are normally taken from their natural habitat, such as soil, the air,
blood and so forth, and may be grown ('cultured') in special media that
contains the nutrients they need to survive. The media may be an Agar plate
(a jelly or jello like material ) or a soupy broth liquid. The single
celled organisms divide in this producing millions of cells (and hopefully
all of the type you want). Viruses are more complicated as they require a
cell to replicate in. Once there are plenty of micro-organisms in the
culture they can be harvested and treated for viewing under the light or
electron microscope. Light microscopy is, with the use of special cellular
stains, is still very important for micro-organism identification.
Once isolated and cultured we can also study them to see how they live
and how to kill them if they are dangerous.

So normally the micro-organisms would be discovered by these traditional
collection, isolation and culturing techniques. Naturally we know most about
micro-organisms that are medically important, i.e. those that cause disease,
allergic reactions or are beneficial to us.

Have a browse through the light blue section of this (UK) link:
http://www.biotopics.co.uk/conten.html#ecology

Some pretty scanning (surface) electron microscope images are here:
http://www.pbrc.hawaii.edu/bemf/microangela/

When using electron microscopes, sometimes micro-organisms may be discovered
when viewing other material, such a plant & animal tissues or cells, e.g.
http://www.sunderland.ac.uk/~es0man/tem1.htm

In many cases new micro-organisms are 'discovered' after a new infectious
disease is identified or during research into a well known disease or
investigating things like soil fertility or the safety of drinking water or
the transfer of disease via the air. However scientists are also interested
in how the micro-organisms live rather just their appearance as seem under
electron microscope. You can use special stains (often heavy metals) under
the transmission electron microscope to highlight intra-cellular cell
structures.

A 'newly' discovered micro-organism is:
http://www.eurekalert.org/pub_releases/1996-09/ORNL-NDBP-170996.php

Regards

Keith
----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk






[----- Original Message -----

X-from: {distall2-at-yahoo.com}
To: {keith.morris-at-ucl.ac.uk}
Sent: Thursday, October 06, 2005 12:47 AM

Paul,
Alan Shinn used to make replicas and sell them, I think for $ 100, but I
think he no longer does. If you can't find some place to buy one, or can't
convince your coworkers to buy you one, you could always make one yourself,
as you'll need something to do in retirement ;o) You can see his plans
here:

http://www.mindspring.com/~alshinn/Leeuwenhoekplans.html

Be sure to check out Roger Baker's great article for a not-so-authentic, but
more functional design, as well as tons more info. on lens making:

http://www.science-info.org/pages/Roger%20Baker/homemade-microscope.pdf


I'm putting the finishing touches on my own Leeuwenhoek replica, so keep in
touch and maybe I'll be able to help you out.

Paul Grover



------------------------------------------------------------------------
May your trails be crooked, winding, lonesome, dangerous, leading to the
most amazing view.

- Edward Abbey




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From: wesaia-at-iastate.edu
Date: Tue, 11 Oct 2005 09:17:15 -0500
Subject: [Microscopy] Re: Re: Doul Layer DVD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I appreciate Wolfgang's digging to see if it might be something real.
However, checking out those pages and doing my own search for "doul DVD"
and "dual DVD", I suspect it is just a spelling error. There were several
other spelling errors on those pages which drops their credibility as an
authoritative source. Maybe doul will catch on as a tricky abbreviation for
double that plays on the word dual. For now, I write it off as a mispelling.

Warren

At 03:17 AM 10/11/05, you wrote:

} Hello and good morning all,
}
} Just only } supplementary {, what I found:
}
}
} http://www.dvd12.info//dvd-13.html
} scroll down, left link-bar-area, Press (Control&letterF) (FIND-Function
} ,search for } doul {) you will find the term (& LINK bar) "Doul Layer DVD"
} but no further explanation exept "Double Layer DVD"
}
} Also on
} http://nessmp3.com/forums/index.php?showtopic=579
} with the } find function { (Ctrl&letter F) and searching for } doul {:
}
} you will find:
}
} ..........} Doul Layer DVD's { right now in my opinion are just a waste of
} money. You need a player that supports the format and they cost big $$$.
} I'de wait a few years before that investment. I know most burners support
} it right now but do you want to shorten the life of your burner to watch a
} movie anyway? {
}
} Seems to be an insiders' "short cut" for Double layer DVD ?...Thanks for
} the question, I haven't heared anything about such new recording medium
} until now...interesting....
}
} regards,
} Wolfgang Muss
} SALK (Salzburger Landeskliniken GesmbH)
} Paracelsus Medical Private University (PMU)
} Institute of Pathology
} Electron Microscopy Lab
} Muellner Hauptstrasse 48
} A-5020 SALZBURG, Austria/Europe


-------------------------------------------
No files should be attached to this message
-------------------------------------------
Warren E. Straszheim, Ph.D.
Materials Analysis and Research Lab
Iowa State University
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FAX: 515-294-4563

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Scanning electron microscopy, x-ray analysis, and image analysis of materials
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From: tisdale-at-vision.eri.harvard.edu
Date: Tue, 11 Oct 2005 10:31:38 -0500
Subject: [Microscopy] SEM height measurements

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I would like to measure height differences between microvilli on
cultured cells that have been imaged by SEM. Is there a program
available that does this type of measurement? Would Image J work? Is
there a direct correlation between brightness of structure and
height of surface structure that could be used in this manner to
compare height of microvilli on adjacent cells? Any opinions would
be welcomed.

Thanks,

Ann Tisdale
Research Associate
Schepens eye Research Institute
Boston, MA 02114
email: tisdale-at-vision.eri.harvard.edu


==============================Original Headers==============================
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From: Mike.Bode-at-soft-imaging.net
Date: Tue, 11 Oct 2005 11:50:06 -0500
Subject: [Microscopy] SEM height measurements

Contents Retrieved from Microscopy Listserver Archives
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Hello Ann,

Local topography is only one factor that influences the signal you get from a sample. Others are variations in scattering coefficients (mainly the atomic number of the sample), edges, orientation to detector, etc. In other words, there is no direct correlation between brightness and structure, unless you have a very simple case. I doubt that you can get reliable topographic information from just a single image. I think, your best try would be to model a structure and compare the results of a simulation with real measurements. You can google "Monte Carlo Electron" and find references to electron scattering simulations. David Joy has been working in this field for some time.

If you can take stereo images (two images at different angles) of your sample, you might be able to get some height information, but it appears that the height differences are very small, so that might not be a possibility either.

The only other technique that I can think of right now would be an AFM type of measurement. Have you looked into that?

mike


Michael Bode, Ph.D.
Soft Imaging System Corp.
12596 West Bayaud Avenue
Suite 300
Lakewood, CO 80228
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-----Original Message-----
X-from: tisdale-at-vision.eri.harvard.edu [mailto:tisdale-at-vision.eri.harvard.edu]
Sent: Tuesday, October 11, 2005 9:39 AM
To: Mike Bode

I would like to measure height differences between microvilli on cultured cells that have been imaged by SEM. Is there a program available that does this type of measurement? Would Image J work? Is there a direct correlation between brightness of structure and height of surface structure that could be used in this manner to
compare height of microvilli on adjacent cells? Any opinions would
be welcomed.

Thanks,

Ann Tisdale
Research Associate
Schepens eye Research Institute
Boston, MA 02114
email: tisdale-at-vision.eri.harvard.edu


==============================Original Headers==============================
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From: allan.mitchell-at-stonebow.otago.ac.nz
Date: Tue, 11 Oct 2005 22:49:15 -0500
Subject: [Microscopy] Birefringence of Fibers

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Keith

as far as I understand the DVDs may be dual layer but I think their
capacity isn't twice 4.7Gb but nearer to 8.4Gb. At typically 5x the
price (or more) of a 4.7Gb DVD this makes them appear even more
uneconomical for data storage. I assume the problem is that they are
more likely to be used to 'rip' a video DVD and this may be reflected
in the price - but I don't know.

Malcolm

Malcolm Haswell
e.m. unit
School of Health, Natural and Social Sciences
University of Sunderland
Tyne & Wear
SR1 3SD
UK

e-mail: malcolm.haswell-at-sunderland.ac.uk



----- Original Message -----
X-from: keith.morris-at-ucl.ac.uk

Hi all

A request from one of our Centre's users. Can anybody help out.

They are looking for the following article from The Microscope Journal
( - an international journal dedicated to the advancement of all forms
of microscopy for the biologist, mineralogist, metallographer or
chemist). Published Quarterly by McCrone Research Institute, Edited by
Dr. Gary Laughlin.

They are after the following article: Gorski, A., and McCrone, W.C.
“Birefringence of Fibers,” THE MICROSCOPE, Vol.46:1, 1998, pp. 3-16

Very happy to pay for photocopying, postage....





Allan Mitchell
Otago Centre for Electron Microscopy
Department of Anatomy and Structural Biology
School of Medical Sciences
P.O. Box 913
Dunedin
New Zealand

Phone (03) 479 5642 or 479 7301
Fax (03) 479 5086 or 479 7254

EM Centre: http://ocem.otago.ac.nz/
Confocal Centre: http://occm.otago.ac.nz/
Department: http://anatomy.otago.ac.nz/



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From: oshel1pe-at-cmich.edu
Date: Wed, 12 Oct 2005 08:00:36 -0500
Subject: [Microscopy] RE: SEM height measurements

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Malcolm,

I must admit I only use double (or is it dual*) sided DVD RAM which
conveniently are naturally exactly 2x4.7GB and so really are 9.4Gb,
but you do have to remove the cartridge and turn it over to get that
extra 4.7Gb (remember the days of the 'B' side?). Of course once its
formatted you get that Gb, bits and bytes thing where the actually
capacity is always lower than 4.7Gb anyway.

I've never used an 8.5Gb dual layer DVD at £3.00+ when 4.7Gb
DVD-R's are far cheaper at 9p and are the only format used by
my Panasonic DVD-RAM multidrives at work (and Toshiba DVD
RAM video recorder and PC's at home). I am adding dual layer DVD
multiwriters (replacing the CD RW's) to co-exist with all my DVD-RAM
cartridge drives as these can write standard DVD -R's at 16x and CD's at 30x
or more (and to dual layer if required in the future). Optical drives are so
incredibly cheap at the moment (and being so are definitely less reliable -
so I always verify each burn).

http://www.dual-layer-dvd.co.uk/

Regards
Keith

*But probably not doul

----- Original Message -----
X-from: {malcolm.haswell-at-sunderland.ac.uk}
To: {keith.morris-at-ucl.ac.uk}
Sent: Tuesday, October 11, 2005 5:57 PM

Ann,

There are programs that will do what you want. Metaxa is one (although expensive), and there very likely is an ImageJ plug-in. The more important question is: do you really want to do these measurements, or can they be done?
There are several problems with measuring biological structures in the SEM:
1) Such measurements require stereopairs and appropriate trignonometry. These methods are well known by the photogrammetry people and are in the literature.
2) Fixation, dehydration, and drying all cause uncontrolled dimensional changes in structures. Further, as the samples sit in storage, they continue to shrink for some unknown time. And possibly can swell some amount when being moved through the air, picking up water from the atmosphere, into and out of the SEM chamber.
2a) These changes are dependent on the mechanical nature of the sample, and its physicochemical properties. This means that the dimensional changes will vary along the different axes as the sample makeup varies. Fibers for instance will behave differently along their length than they will across their width. This also applies to ultrastructure, since again the physicochemical properties are not identical in all directions. Plus, of course, the samples must have been handled *exactly* identically at all stages.
So any differences in microvilli height are much more likely due to specimen processing and handling than to any intrinsic difference between e.g., cells.
The possible exceptions are structures that are mechanically rigid enough to not be affected by the processing. Well-tanned insect cuticle and wood may fit this requirement. Calcified bone and teeth do. Cells don't.
The only possible way around this particular problem is to do the work on properly cryofixed cells in a cryoSEM, and therefore not do any fixation, dehydration, etc. This means that unless the cells can be kept frozen in storage and never warmed much getting them into and out of the cryoSEM, the samples are only good when first examined. No going back to a sample.
3) I routinely see major differences in microvilli, such as presence/absence, and other surface ultrastructure on neighboring (as in right next to each other) cells. So, the cells were handled "*exactly* identically at all stages". But what does this mean? Most likely, just that the cells were at different metabolic stages. Like when looking at a section of epithelium with mucus-secreting cells. Different cells are at different stages of the secretory cycle, but it doesn't mean anything else.
4) The measurements are questionable anyway, unless the SEM is an expensive metrology instrument that has been carefully calibrated at all magnifications, working distances, tilts, etc. that are actually used. A non-metrology SEM is only good to +/- 5% accuracy at best -- if calibrated as above -- and more likely +/- 10%. Such measurements also depend on the local properties of the sample, which is highly affected by topography. The accuracy can be as low as +/- 20%. So relative statements, like "cell A's microvilli are about 120 nm +/- about X nm and cell B's microvilli are about 80 nm +/- about Y nm, so cell B's microvilli are approximately 2/3 the size of cell A' microvilli" are valid. A statement like "cell A's microvilli are 121.5 nm +/- 2 nm and cell B's microvilli are 79.3 nm +/- 3 nm" are invalid, even if measurements are made that precisely in stereopairs. The physics of imaging in the SEM isn't there, nor are the possible sources of error well enough known to allow such precision. Maybe in semiconductors or metals, but not in biological samples.
5) Feature brightness is correlated with height, but it is also correlated with many other properties of the sample. Local atomic and molecular composition, local density, local topography, etc., "local" meaning with the beam/specimen interaction volume. So, no, there is no direct, useful correlation between height and feature brightness. Although I'd be willing to bet that a particular sample (or type of sample) can be found where there is such a direct correlation, it won't be cellular ultrastructure.

Mike Bode's suggestion of something like a AFM is much more likely to give you the information you need. If the probe can be kept from ripping up the cells ...

Phil


I would like to measure height differences between microvilli on
cultured cells that have been imaged by SEM. Is there a program
available that does this type of measurement? Would Image J work? Is
there a direct correlation between brightness of structure and
height of surface structure that could be used in this manner to
compare height of microvilli on adjacent cells? Any opinions would
be welcomed.

Thanks,

Ann Tisdale
Research Associate
Schepens eye Research Institute
Boston, MA 02114
email: tisdale-at-vision.eri.harvard.edu


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From: eschumacher-at-mccrone.com
Date: Wed, 12 Oct 2005 08:38:38 -0500
Subject: [Microscopy] Birefringence of Fibers

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Allan,

We have the volume, and would be happy to provide a copy of the article.
We can photocopy it, or if preferred, we can scan it and send a PDF
file. That might be a good option, as the last page is a color plate.

Please let me know what format you would like, and where to send it.

Regards,

Elaine

*********************************************************************
Elaine F.Schumacher
Senior Research Scientist
McCrone Associates, Inc.
850 Pasquinelli Drive
Westmont, IL 60559-5539 USA
630-887-7100 (tel)
630-887-7417 (fax)
E-mail: eschumacher-at-mccrone.com
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disclosure, copying, use or distribution of the information
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-----Original Message-----
X-from: allan.mitchell-at-stonebow.otago.ac.nz
[mailto:allan.mitchell-at-stonebow.otago.ac.nz]
Sent: Tuesday, October 11, 2005 10:51 PM
To: Elaine F. Schumacher

Hi all

A request from one of our Centre's users. Can anybody help out.

They are looking for the following article from The Microscope Journal
( - an international journal dedicated to the advancement of all forms
of microscopy for the biologist, mineralogist, metallographer or
chemist). Published Quarterly by McCrone Research Institute, Edited by
Dr. Gary Laughlin.

They are after the following article: Gorski, A., and McCrone, W.C.
"Birefringence of Fibers," THE MICROSCOPE, Vol.46:1, 1998, pp. 3-16

Very happy to pay for photocopying, postage....





Allan Mitchell
Otago Centre for Electron Microscopy
Department of Anatomy and Structural Biology
School of Medical Sciences
P.O. Box 913
Dunedin
New Zealand

Phone (03) 479 5642 or 479 7301
Fax (03) 479 5086 or 479 7254

EM Centre: http://ocem.otago.ac.nz/
Confocal Centre: http://occm.otago.ac.nz/
Department: http://anatomy.otago.ac.nz/






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From: pgan-at-ap.ansell.com
Date: Wed, 12 Oct 2005 08:47:04 -0500
Subject: [Microscopy] [Filtered] AskAMicroscopist: gold/palladium or gold coating

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (pgan-at-ap.ansell.com) from http://www.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Tuesday, October 11, 2005 at 22:05:47
---------------------------------------------------------------------------

Email: pgan-at-ap.ansell.com
Name: Phay Fang Gan

Organization: Ansell

Education: Graduate College

Location: Shah Alam, selangor, Malaysia

Question: I was once asked by a consultant whether gold/palladium or gold coating would affect the surface morphology of a specimen coated. Appreciate much all your professional advice

---------------------------------------------------------------------------

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From: eschumacher-at-mccrone.com
Date: Wed, 12 Oct 2005 09:03:08 -0500
Subject: [Microscopy] Birefringence of Fibers

Contents Retrieved from Microscopy Listserver Archives
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Fellow Listers,

As an addendum to my previous posting, if no one else has responded, and
we are asked to provide a copy, we would of course get permission from
the McCrone Research Institute to do so, or they could be contacted
directly.

Regards,

Elaine

*********************************************************************
Elaine F.Schumacher
Senior Research Scientist
McCrone Associates, Inc.
850 Pasquinelli Drive
Westmont, IL 60559-5539 USA
630-887-7100 (tel)
630-887-7417 (fax)
E-mail: eschumacher-at-mccrone.com
Web Site: www.mccrone.com
*********************************************************************
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intended recipient. If you are not the intended recipient,
disclosure, copying, use or distribution of the information
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*********************************************************************

-----Original Message-----
X-from: allan.mitchell-at-stonebow.otago.ac.nz
[mailto:allan.mitchell-at-stonebow.otago.ac.nz]
Sent: Tuesday, October 11, 2005 10:51 PM
To: Elaine F. Schumacher

Hi all

A request from one of our Centre's users. Can anybody help out.

They are looking for the following article from The Microscope Journal
( - an international journal dedicated to the advancement of all forms
of microscopy for the biologist, mineralogist, metallographer or
chemist). Published Quarterly by McCrone Research Institute, Edited by
Dr. Gary Laughlin.

They are after the following article: Gorski, A., and McCrone, W.C.
"Birefringence of Fibers," THE MICROSCOPE, Vol.46:1, 1998, pp. 3-16

Very happy to pay for photocopying, postage....





Allan Mitchell
Otago Centre for Electron Microscopy
Department of Anatomy and Structural Biology
School of Medical Sciences
P.O. Box 913
Dunedin
New Zealand

Phone (03) 479 5642 or 479 7301
Fax (03) 479 5086 or 479 7254

EM Centre: http://ocem.otago.ac.nz/
Confocal Centre: http://occm.otago.ac.nz/
Department: http://anatomy.otago.ac.nz/






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From: oshel1pe-at-cmich.edu
Date: Wed, 12 Oct 2005 09:24:02 -0500
Subject: [Microscopy] RE: [Filtered] AskAMicroscopist: gold/palladium or gold coating

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

The coating itself won't affect the surface morphology, although the coating process might. Sputter coating can heat specimens. Normally, this isn't a problem, since sputter coaters generally are designed to keep the electrons, which do most of the heating, away from the samples. But for low melting-point samples, such as bloom on chocolate, even short bursts of coating with melt the surface. As I found out from experience.
But, at high magnification, say 30,000X and above, the "surface morphology" of the sample is modified in the sense that the structure of the coating becomes visible. Pure gold produces a lumpier coat than say 60/40 gold/palladium, and since Au/Pd is cheaper than pure Au, I find it best to just use Au/Pd targets.

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859




Email: pgan-at-ap.ansell.com
Name: Phay Fang Gan

Organization: Ansell

Education: Graduate College

Location: Shah Alam, selangor, Malaysia

Question: I was once asked by a consultant whether gold/palladium or gold coating would affect the surface morphology of a specimen coated. Appreciate much all your professional advice


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From: David.Patton-at-uwe.ac.uk
Date: Wed, 12 Oct 2005 09:33:12 -0500
Subject: [Microscopy] RE: [Filtered] AskAMicroscopist: gold/palladium or

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Is there any disadvantage in moving from Au to Au/Pd targets eg vacuum
requirements or quality/quantity of coating for low magnification
applications?

Dave


-----Original Message-----
X-from: oshel1pe-at-cmich.edu [mailto:oshel1pe-at-cmich.edu]
Sent: 12 October 2005 15:28
To: David Patton

The coating itself won't affect the surface morphology, although the
coating process might. Sputter coating can heat specimens. Normally,
this isn't a problem, since sputter coaters generally are designed to
keep the electrons, which do most of the heating, away from the samples.
But for low melting-point samples, such as bloom on chocolate, even
short bursts of coating with melt the surface. As I found out from
experience.
But, at high magnification, say 30,000X and above, the "surface
morphology" of the sample is modified in the sense that the structure of
the coating becomes visible. Pure gold produces a lumpier coat than say
60/40 gold/palladium, and since Au/Pd is cheaper than pure Au, I find it
best to just use Au/Pd targets.

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859




Email: pgan-at-ap.ansell.com
Name: Phay Fang Gan

Organization: Ansell

Education: Graduate College

Location: Shah Alam, selangor, Malaysia

Question: I was once asked by a consultant whether gold/palladium or
gold coating would affect the surface morphology of a specimen coated.
Appreciate much all your professional advice


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From: oshel1pe-at-cmich.edu
Date: Wed, 12 Oct 2005 09:42:57 -0500
Subject: [Microscopy] RE: [Filtered] AskAMicroscopist: gold/palladium or

Contents Retrieved from Microscopy Listserver Archives
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No.
The Au/Pd targets work the same as pure Au targets, and I use the same coating parameters. If you use a coating thickness monitor, like a quartz-crystal instrument, you have to change the work function and mass in the programming. If a thickness monitor isn't used, then I don't find any need for changes.
The Au/Pd coating at low mags is as good as gold.

Phil

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859



-----Original Message-----
X-from: Oshel, Philip Eugene
Sent: Wed 12-Oct-05 10:38
To: David.Patton-at-uwe.ac.uk

The coating itself won't affect the surface morphology, although the
coating process might. Sputter coating can heat specimens. Normally,
this isn't a problem, since sputter coaters generally are designed to
keep the electrons, which do most of the heating, away from the samples.
But for low melting-point samples, such as bloom on chocolate, even
short bursts of coating with melt the surface. As I found out from
experience.
But, at high magnification, say 30,000X and above, the "surface
morphology" of the sample is modified in the sense that the structure of
the coating becomes visible. Pure gold produces a lumpier coat than say
60/40 gold/palladium, and since Au/Pd is cheaper than pure Au, I find it
best to just use Au/Pd targets.

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859




Email: pgan-at-ap.ansell.com
Name: Phay Fang Gan

Organization: Ansell

Education: Graduate College

Location: Shah Alam, selangor, Malaysia

Question: I was once asked by a consultant whether gold/palladium or
gold coating would affect the surface morphology of a specimen coated.
Appreciate much all your professional advice




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From: sachep-at-rockefeller.edu
Date: Thu, 13 Oct 2005 08:34:13 -0500
Subject: [Microscopy] AskAMicroscopist: What incubation media should I use to

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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (sachep-at-rockefeller.edu) from http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Thursday, October 13, 2005 at 04:28:56
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Email: sachep-at-rockefeller.edu
Name: Pallavi Sachdev

Organization: Rockefeller University

Education: Graduate College

Location: New York, Ny

Question: What incubation media should I use to perform live cell imaging of cells in an open chamber. ie. buffer conditions
HEPES concentration etc.
Thank you

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From: vincent.metzger-at-philips.com
Date: Thu, 13 Oct 2005 08:35:49 -0500
Subject: [Microscopy] viaWWW: boundary grain of Wfilament

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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (vincent.metzger-at-philips.com) from http://www.microscopy.com/MLFormMail.html on Thursday, October 13, 2005 at 07:54:07
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Email: vincent.metzger-at-philips.com
Name: vincent metzger

Organization: philips

Title-Subject: [Filtered] lamps filament preparation

Question: I would like to study the boundary grain of Wfilament of lamp. I'm searching a way to prepare the sample to make good observation of the grain boundary.

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From: curt-at-oxfordenvironment.co.uk
Date: Thu, 13 Oct 2005 08:36:14 -0500
Subject: [Microscopy] viaWWW: M7A Yellow blue edging on image

Contents Retrieved from Microscopy Listserver Archives
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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (curt-at-oxfordenvironment.co.uk) from http://www.microscopy.com/MLFormMail.html on Wednesday, October 12, 2005 at 02:59:17
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Email: curt-at-oxfordenvironment.co.uk
Name: Curt Lamberth

Title-Subject: [Filtered] MListserver: M7A Yellow blue edging on image

Question:
Hello,

I have a Wild M7A stereomicroscope and the image(s) are edged with yellow on one side and, if you close one eye, blue on the other. This causes a yellow cast to object edges and is very annoying.

I am using either x20 or x10 eyepieces, with LED or f-optic ring illumination. The problem is most obvious under higher magnifications.

Does anyone know why this happens, and how it can be solved?

Many thanks,

Curt

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From: mmalecki-at-wisc.edu
Date: Thu, 13 Oct 2005 08:59:35 -0500
Subject: [Microscopy] search for the 3D reconstruction from EM tilt series software

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Greetings, All!
We are in the search of a 3D reconstruction from tilt series software
from EM for our undergraduate students. Would you be willing to share
your experience on various options and programs. The most basic and
generic (although addressing register alignment and missing cone),
the most desired.
Vendors welcome.


==============================Original Headers==============================
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From: flegler-at-msu.edu
Date: Thu, 13 Oct 2005 09:06:10 -0500
Subject: [Microscopy] LM Job Posting

Contents Retrieved from Microscopy Listserver Archives
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Confocal Microscopist
Center for Advanced Microscopy
Michigan State University

Full-time confocal microscopist. This is a teaching/service/support
position at the Center for Advanced Microscopy at Michigan State
University. CAM is the central microscopy laboratory for the MSU campus,
serving users from a wide variety of disciplines. The appointment will be
in the Academic Specialist category, one of the academic support ranks at
the University. The appointment will be a 12-month, annual year
appointment in the continuing appointment system. Salary will be
commensurate with experience.

Requirements include: a PhD degree in the biological sciences and a minimum
of three years experience with confocal microscopy instrumentation
including theory, operation, and maintenance. Experience in preparing and
imaging fixed and living biological tissue is required. Experience with
immunohistochemistry, Fluorescence Resonance Energy Transfer (FRET),
Fluorescence Loss in Photobleaching (FLIP) and Fluorescence Recovery After
Photobleaching (FRAP) is highly desirable as is knowledge of multi-user
facility operation. The individual must have a demonstrated competence in
and a strong commitment to graduate and post-graduate instruction and
should assist others in planning their microscopy research programs and/or
sample preparation.

The individual selected will supervise a newly funded spectral confocal
microscope, as well as two existing confocal microscopes. U.S. citizenship
is not required; applicants who are not U.S. citizens or permanent
residents must provide documentation evidencing employment authorization in
the United States. The position begins effective Spring 2006.

Submit a curriculum vita, transcripts of academic training, a statement
describing your interest in the position, evidence of teaching ability, and
arrange for three letters of recommendation to be sent to: Dr. Stanley L.
Flegler, Chair, Search Committee, Center for Advanced Microscopy, B4 CIPS
Bldg, Michigan State University, East Lansing, MI 48824,
U.S.A. Applications are due by December 1, 2005.

MSU is an Affirmative Action/Equal Opportunity Institution


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From: syli-at-northwestern.edu
Date: Thu, 13 Oct 2005 09:55:41 -0500
Subject: [Microscopy] Anew platform for microscopists to discuss microscopy online

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear list,

I just created a new platform for us to discuss microscopy online using
Web Wiz Forums. It might be a better platform than listservers, especially
for those who want to reduce unnecessary emails. (I am not intending to
say this listserv is bad. In fact Nestor did a great job and the
listserv has served us for more than 10 years.) With the new online
forum you can still set email notification for the topics you are
interested in, at the same time you may ignore the topics out of
interest.

Other features of this online discussion board include:
***You need NOT register to post messages in most of the forums. However
you have to type in your name every time you post a message. Registered
users have full access to the website contents and functionality.
***Students or any Microscopists may ask questions related to microscopy
in the Discussion board.
***Employers may post vacant positions in the Jobs & Resumes.
***Job-hunters are welcome to post their resumes too.
***Users may post and discuss their recent publications in
recommended Readings.
***Open facilities or EM consulting companies may post their contact
information in EM facilities nearby.
***Software authors may post their beta tests or freewares/sharewares in
Software downloads.
***Commercial companies may post their product information and contact
information free in EM companies
***I am collecting Daily Operation Manuals for all kinds of microscopes.
Please send me your contributions to me. I will include your name as
courtesy. After I have collected sufficient amount of manuals I will put
them here so our users may benefit from your kindness.
***Finally but not least, you may create your own customized interest
group in Customized Discussion Groups. You may set it as
access-by-authorization-only or open to everyone.

The link to this forum is
http://www.ShuyouLi.com/

I welcome all kinds of comments, suggestions and criticisms - to make
us microscopists feel more convenient to discuss virtually world wide.

Thanks,
Shuyou Li


_____________________________
Shu-You Li, Ph.D.
Electron Microscopist, EPIC
NUANCE
Northwestern University
2220 Campus Drive, 1161 Cook Hall (#2036 for mail)
Evanston, IL 60208-3108, USA
Ph: (847) 491-6723(O), (847) 491-7806(L), Fax: (847) 467-6573
Email: syli-at-northwestern.edu; shuyouli-at-gmail.com
http://www.nuance.northwestern.edu/EPIC
http://www.shuyouli.com



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10, 16 -- Date: Thu, 13 Oct 2005 09:57:37 -0500
10, 16 -- From: Shu-You Li {syli-at-northwestern.edu}
10, 16 -- To: microscopy-at-microscopy.com
10, 16 -- Subject: Anew platform for microscopists to discuss microscopy online
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From: underwoo-at-u.washington.edu
Date: Thu, 13 Oct 2005 10:24:40 -0500
Subject: [Microscopy] Cryothin Immunogold?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hello All,

I have a question for all thoughs that have done immunogold labelling on
cryothin sections. I am having trouble getting consistant, predictable results.
Meaning that my signal to noise seems variable which makes it difficult to
standardize the protocol. One thing that I have noticed is a 5-15x increase in
signal (based on gold count) if I use just BSA and omit any normal serum. I
also see an increase in background but in seemingly random patterns. (Sometimes
I think the positives are much cleaner than the minus primary controls).
The protocol that I am using at present is: place freshly picked up sections on
droplet of 0.05M glycine / 1% BSA in TBS (1 hr), then 1% BSA in TBS (1 hr),
primary antibody overnight (1% BSA/TBS), secondary ( ultrasmall up to 20nm
gold) for (2 hr), fix, embed and view. My previous standard protocol was
including 5-10% normal serum in all the above solutions.
Has anyone else seen this increase in labelling frequency?
I would be interested in protocols that people are very pleased with and give
consistant clean results.
Bottom line: Have any of you found any key tricks to getting the immunogold
labelling of cryothin sections to perform without the "hitch".

Thank you for any help!

Robert Underwood
Sr. Research Scientist
U of Washington


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From: derby-at-nmt.edu
Date: Thu, 13 Oct 2005 10:46:56 -0500
Subject: [Microscopy] How to remove formalin

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Greetings to all,

I am a bit stumped.
I have been asked to find a way to remove formalin, from formalin fixed
viruses.
Any tips/trick/methods would be appreciated.

Thank you,

Robert Derby
New Mexico Tech.


==============================Original Headers==============================
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5, 16 -- Date: Thu, 13 Oct 2005 09:47:45 -0600
5, 16 -- Subject: How to remove formalin
5, 16 -- From: Robert {derby-at-nmt.edu}
5, 16 -- To: {Microscopy-at-msa.microscopy.com}
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From: randerson20-at-tampabay.rr.com
Date: Thu, 13 Oct 2005 11:01:50 -0500
Subject: [Microscopy] Re: Anew platform for microscopists to discuss microscopy

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Very generous of you to say that you don't intend to say that the
microscopy listserver is bad.

The last thing I need is another forum sending me email. Thanks, but no
thanks. I'm sticking with Nestor where I can expect another decade or
two of continuity!

Ron Anderson

syli-at-northwestern.edu wrote:

} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America



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From: W.Muss-at-salk.at
Date: Thu, 13 Oct 2005 11:20:27 -0500
Subject: [Microscopy] AW: How to remove formalin

Contents Retrieved from Microscopy Listserver Archives
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Good afternoon,
dear Robert,
as normally virus(ses) or virus suspension have to be "inactivated" by
formaldehyde for handling, mailing and processing (at least in a
BSL2-category labs,
see, e.g., http://www.d.umn.edu/ehso/biosafety/bsl2.html and
see also specific recommendations at

http://www.rki.de/cln_011/nn_527102/SiteGlobals/Forms/Suche/en/serviceSu
cheForm,templateId=processForm.html?resourceId=231942&input_=&pageLocale
=en&searchEngineQueryString=rapid+EM&sortString=-score
or:
http://www.rki.de/cln_011/nn_231622/EN/Content/Institute/DepartmentsUnit
s/NRC/CONSULAB/download__list__04.html__nnn=true
==}
http://www.rki.de/cln_011/nn_231642/EN/Content/Institute/DepartmentsUnit
s/NRC/CONSULAB/download__list__04,templateId=raw,property=publicationFil
e.pdf/download_list_04

or see the additional separate articles on that site ),

I think that the fixation already has been 100% and finished for the
"particles" and you then are dealing only with the "remaining" fluid.

Since there is nothing left for further fixation (of virus particles,
because they ARE fixed!) then, only excess formaldehyde-containing solution
has to be removed. This can be easily done by spilling grids (with
previousely absorbed virus particles) with Aqua (tri-,bidest), in the case
you have to remove fixative from e.g. Eppendorf's (containing virus
supension in Formaldehyde solution) you are to "wash" the microtubes for
several times (after each step you have to spin down virus particles and
for such you need perhaps } an airfuge { to get the high g-forces needed).

Perhaps another possibility (I am not aware nor have tried): perhaps
filtering or using the agar-concentraion technique....
Unfortunately you have not told us the reason for you have to get rid of
the excess formaldehyde portion....

Best wishes
(and hopefully there are a lot of other interesting considerations),

regards,
Wolfgang Muss
Salzburg, Austria

OR Dr. Wolfgang Muss Member of
EM-Lab
Institute of Pathology, SALK
(Salzburger Landeskliniken gemeinnuetzige GesmbH)
Muellner Hauptstrasse 48
A-5020 SALZBURG AUSTRIA/EUROPE

and/or/alternatively

Paracelsus Medical Private University (PMU)
Institute of Pathology
Electron Microscopy Lab
Muellner Hauptstrasse 48
A-5020 SALZBURG, Austria/Europe
Phone work: +43+662+4482+4720
Mobile phone work:+43+662+4482-57704
Fax-No. at work: ++43+662+4482-882 ext (please, only by indicating: "c/o
W.Muss")
E-Mail work: W.Muss-at-SALK.at

Mobile-phone private: ++43+676+5 369-456
E-Mail private: wij.Muss-at-aon.at

----------
Von: derby-at-nmt.edu[SMTP:derby-at-nmt.edu]
Antwort an: derby-at-nmt.edu
Gesendet: Donnerstag, 13. Oktober 2005 17:52
An: W.Muss-at-salk.at
Betreff: [Microscopy] How to remove formalin




------------------------------------------------------------------------
----
The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

Greetings to all,

I am a bit stumped.
I have been asked to find a way to remove formalin, from formalin fixed
viruses.
Any tips/trick/methods would be appreciated.

Thank you,

Robert Derby
New Mexico Tech.


==============================Original
Headers==============================
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5, 16 -- Date: Thu, 13 Oct 2005 09:47:45 -0600
5, 16 -- Subject: How to remove formalin
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25, 28 -- From W.Muss-at-salk.at Thu Oct 13 11:20:27 2005
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25, 28 -- Message-ID: {01C5D022.C4B83840.W.Muss-at-salk.at}
25, 28 -- From: MUSS Wolfgang PhD {W.Muss-at-salk.at}
25, 28 -- Reply-To: "W.Muss-at-salk.at" {W.Muss-at-salk.at}
25, 28 -- To: "'derby-at-nmt.edu'" {derby-at-nmt.edu}
25, 28 -- Cc: "'Microscopy-at-msa.microscopy.com'" {Microscopy-at-msa.microscopy.com}
25, 28 -- Subject: AW: [Microscopy] How to remove formalin
25, 28 -- Date: Thu, 13 Oct 2005 18:20:18 +0200
25, 28 -- Return-Receipt-To: MUSS Wolfgang PhD {W.Muss-at-salk.at}
25, 28 -- Organization: SALK,Salzburger Landeskliniken, Pathologie, EM-Labor
25, 28 -- X-Mailer: Microsoft Internet E-Mail/MAPI - 8.0.0.4211
25, 28 -- MIME-Version: 1.0
25, 28 -- Content-Type: text/plain; charset="us-ascii"
25, 28 -- Content-Transfer-Encoding: 7bit
25, 28 -- X-Virii-Scanned: by Sophos/ClamAV at salk.at
==============================End of - Headers==============================




From: marc.pypaert-at-yale.edu
Date: Thu, 13 Oct 2005 11:42:42 -0500
Subject: [Microscopy] Re: Cryothin Immunogold?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Robert,

We have very consistent results with a different protocol. Check it out
on our website (protocol 7):
http://cellserv.med.yale.edu/imaging/ccmi/elect_protocols.html

The main differences are:

- We use 0.1 M NH4Cl instead of glycin, but that should not matter much.
- We use 1% of fish skin gelatin instead of BSA.
- We use PBS instead of TBS, but again that should not really matter
- Incubations with antibodies and protein A-gold are for 30 min. This
could be an important factor. Why do you incubate so long with
antibodies? Maybe when antibodies don't work too well it would
make sense, but I wouldn't do this systematically. This is bound to
create problems with aggregation of antibodies, increased background,
etc. Also, we only block with NH4Cl and fish skin gelatin for a maximum
of 10 and 20 mins respectively. This means most of our immunolabelings
are completed within 2 hours! Much more cost-efficient I would say.

Good luck

Marc



On Oct 13, 2005, at 11:25 AM, underwoo-at-u.washington.edu wrote:

}
}
}
} ----------------------------------------------------------------------
} ------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of
} America
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} MicroscopyListserver
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} ----------------------------------------------------------------------
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}
} Hello All,
}
} I have a question for all thoughs that have done immunogold
} labelling on
} cryothin sections. I am having trouble getting consistant,
} predictable results.
} Meaning that my signal to noise seems variable which makes it
} difficult to
} standardize the protocol. One thing that I have noticed is a 5-15x
} increase in
} signal (based on gold count) if I use just BSA and omit any normal
} serum. I
} also see an increase in background but in seemingly random
} patterns. (Sometimes
} I think the positives are much cleaner than the minus primary
} controls).
} The protocol that I am using at present is: place freshly picked up
} sections on
} droplet of 0.05M glycine / 1% BSA in TBS (1 hr), then 1% BSA in TBS
} (1 hr),
} primary antibody overnight (1% BSA/TBS), secondary ( ultrasmall up
} to 20nm
} gold) for (2 hr), fix, embed and view. My previous standard
} protocol was
} including 5-10% normal serum in all the above solutions.
} Has anyone else seen this increase in labelling frequency?
} I would be interested in protocols that people are very pleased
} with and give
} consistant clean results.
} Bottom line: Have any of you found any key tricks to getting the
} immunogold
} labelling of cryothin sections to perform without the "hitch".
}
} Thank you for any help!
}
} Robert Underwood
} Sr. Research Scientist
} U of Washington
}
}
} ==============================Original
} Headers==============================
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} 5, 20 -- From: Robert A Underwood {underwoo-at-u.washington.edu}
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} 5, 20 -- Subject: [Microscopy] Cryothin Immunogold?
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==============================Original Headers==============================
11, 20 -- From marc.pypaert-at-yale.edu Thu Oct 13 11:42:42 2005
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11, 20 -- Date: Thu, 13 Oct 2005 12:42:15 -0400
11, 20 -- From: Marc Pypaert {marc.pypaert-at-yale.edu}
11, 20 -- Subject: Re: [Microscopy] Cryothin Immunogold?
11, 20 -- In-reply-to: {200510131525.j9DFPK1k019461-at-ns.microscopy.com}
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==============================End of - Headers==============================




From: W.Muss-at-salk.at
Date: Thu, 13 Oct 2005 11:45:05 -0500
Subject: [Microscopy] AW: RE: apologies for poor links...How to remove formalin

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Robert, dear all,

I am sorry for the wrong links you might find if using the Internet-links
given in my previous mail which also was sent out to the listserver.

Unfortunately you will be directed to a page with "German" text, stating
that ALL LINKS of the RKI(Robert Koch Institute, Berlin have been subjected
to link-address changes....(due to a new Content Management System)....

Unfortunately it seems there is no possibility to get the correct site(s)
by means of pasting the URL's of the English-Version-documents

But perhaps you can try the following: } German { page,
Find the link "ENGLISH" (left lower corner) and set
"rapid EM" as the search phrase....perhaps then you will get linked with
the pages I recommended in the mail before.
At least I was able to retrieve the documents (esp. No 18....which really
has the URL
http://www.rki.de/cln_011/nn_231622/EN/Content/Institute/DepartmentsUnit
s/NRC/CONSULAB/download__list__04.html__nnn=true ) that way again....

Regards
Wolfgang


----------
Von: derby-at-nmt.edu[SMTP:derby-at-nmt.edu]
Antwort an: derby-at-nmt.edu
Gesendet: Donnerstag, 13. Oktober 2005 17:52
An: W.Muss-at-salk.at
Betreff: [Microscopy] How to remove formalin




------------------------------------------------------------------------
----
The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

Greetings to all,

I am a bit stumped.
I have been asked to find a way to remove formalin, from formalin fixed
viruses.
Any tips/trick/methods would be appreciated.

Thank you,

Robert Derby
New Mexico Tech.


==============================Original
Headers==============================
5, 16 -- From derby-at-nmt.edu Thu Oct 13 10:46:56 2005
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5, 16 -- Received: from [129.138.14.28] (robert.nmt.edu [129.138.14.28])
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-0600
5, 16 -- User-Agent: Microsoft-Outlook-Express-Macintosh-Edition/5.02.2022
5, 16 -- Date: Thu, 13 Oct 2005 09:47:45 -0600
5, 16 -- Subject: How to remove formalin
5, 16 -- From: Robert {derby-at-nmt.edu}
5, 16 -- To: {Microscopy-at-msa.microscopy.com}
5, 16 -- Message-ID: {BF73DDC1.357%derby-at-nmt.edu}
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==============================Original Headers==============================
20, 28 -- From W.Muss-at-salk.at Thu Oct 13 11:45:04 2005
20, 28 -- Received: from Hermes.salk.at (hermes.lks.at [193.170.167.9])
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20, 28 -- Message-ID: {01C5D026.34E22E20.W.Muss-at-salk.at}
20, 28 -- From: MUSS Wolfgang PhD {W.Muss-at-salk.at}
20, 28 -- Reply-To: "W.Muss-at-salk.at" {W.Muss-at-salk.at}
20, 28 -- To: "'derby-at-nmt.edu'" {derby-at-nmt.edu}
20, 28 -- Cc: "'Microscopy-at-msa.microscopy.com'" {Microscopy-at-msa.microscopy.com}
20, 28 -- Subject: AW: [Microscopy] RE: apologies for poor links...How to remove formalin
20, 28 -- Date: Thu, 13 Oct 2005 18:44:55 +0200
20, 28 -- Return-Receipt-To: MUSS Wolfgang PhD {W.Muss-at-salk.at}
20, 28 -- Organization: SALK,Salzburger Landeskliniken, Pathologie, EM-Labor
20, 28 -- X-Mailer: Microsoft Internet E-Mail/MAPI - 8.0.0.4211
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==============================End of - Headers==============================




From: jquinn-at-www.matscieng.sunysb.edu
Date: Thu, 13 Oct 2005 11:49:58 -0500
Subject: [Microscopy] re: Anew Platform..........

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

This is not specifically a microscopy job, but it could be and there are
members of the microscopy community with overlapping interests, so I
thought that I would forward this to the listserver from Brian Holloway.
Please do not contact me.
-Scott


Here is their announcement:
The Department of Applied Science at the College of William
and Mary, an interdisciplinary PhD-focused department
established in 1995, invites applicants for a tenure-track
position at the assistant professor level in biophysics,
neurophysiology, biomedical engineering, biomaterials,
or a related field, emphasizing either computational or
experimental approaches. The new faculty member will be
expected to establish a vigorous, independent and wellfunded
graduate research program at the interface of the
physical, mathematical, and biological sciences. Excellence and high
commitment to the
teaching of graduate and undergraduate students is also expected of all
faculty at the College.
Located two hours south of Washington, D.C. in Williamsburg, Virginia,
the College of William
and Mary is the second-oldest university in the United States and it was
recently names by the
editors of Newsweek Magazine as the "hottest small state school" in the
nation.

Candidates should submit a complete curriculum vitae, contact
information for three letters of reference, and copies of no more than
five refereed publications to: Faculty Search Committee,
Department of Applied Science, The College of William & Mary,
PO Box 8795, Williamsburg, VA 23187-8795. Review of materials
is expected to begin January 1, 2006 and will continue until the
position is filled.

The College is an EEO/AA employer.
Chartered in 1693 by the King and Queen of England,
William and Mary has approximately 5000
undergraduates and 2300 graduate and professional
students in 19 advanced degree programs. Applied
Science is an interdisciplinary graduate department
that offers M.S. and Ph.D. degrees. In addition to
the core faculty of the Department of Applied Science,
faculty from the Departments of Biology, Chemistry,
Computer Science, Mathematics, and Physics as well
as from NASA's Langley Research Center, DoE's Jefferson Lab, and local
industry participate
under various levels of affiliation.
http://www.as.wm.edu

-----Original Message-----
X-from: Brian Holloway [mailto:holloway-at-AS.WM.EDU]
Sent: Thursday, October 13, 2005 8:49 AM
To: holloway-at-as.wm.edu


Shu-You Li

I believe that your intent maybe honest,
however, the impact will be negative.

You would need a greater track-record
before attempting to usurp this listserver.

regards,

JQuinn

} From mail-at-ns.microscopy.com Thu Oct 13 10:52:22 2005
} Date: Thu, 13 Oct 2005 09:56:30 -0500
} To: jquinn-at-www.matscieng.sunysb.edu
} From: syli-at-northwestern.edu
} Reply-to: syli-at-northwestern.edu
} X-Resent-From: "Microscopy Listserver" {microscopy-at-microscopy.com}
} Subject: [Microscopy] Anew platform for microscopists to discuss microscopy online
} Errors-To: MicroscopyListSpamFilter-at-microscopy.com
} X-lewp: MicroscopyListSpam NAGS
}
}
}
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
} Dear list,
}
} I just created a new platform for us to discuss microscopy online using
} Web Wiz Forums. It might be a better platform than listservers, especially
} for those who want to reduce unnecessary emails. (I am not intending to
} say this listserv is bad. In fact Nestor did a great job and the
} listserv has served us for more than 10 years.) With the new online
} forum you can still set email notification for the topics you are
} interested in, at the same time you may ignore the topics out of
} interest.
}
} Other features of this online discussion board include:
} ***You need NOT register to post messages in most of the forums. However
} you have to type in your name every time you post a message. Registered
} users have full access to the website contents and functionality.
} ***Students or any Microscopists may ask questions related to microscopy
} in the Discussion board.
} ***Employers may post vacant positions in the Jobs & Resumes.
} ***Job-hunters are welcome to post their resumes too.
} ***Users may post and discuss their recent publications in
} recommended Readings.
} ***Open facilities or EM consulting companies may post their contact
} information in EM facilities nearby.
} ***Software authors may post their beta tests or freewares/sharewares in
} Software downloads.
} ***Commercial companies may post their product information and contact
} information free in EM companies
} ***I am collecting Daily Operation Manuals for all kinds of microscopes.
} Please send me your contributions to me. I will include your name as
} courtesy. After I have collected sufficient amount of manuals I will put
} them here so our users may benefit from your kindness.
} ***Finally but not least, you may create your own customized interest
} group in Customized Discussion Groups. You may set it as
} access-by-authorization-only or open to everyone.
}
} The link to this forum is
} http://www.ShuyouLi.com/
}
} I welcome all kinds of comments, suggestions and criticisms - to make
} us microscopists feel more convenient to discuss virtually world wide.
}
} Thanks,
} Shuyou Li
}
}
} _____________________________
} Shu-You Li, Ph.D.
} Electron Microscopist, EPIC
} NUANCE
} Northwestern University
} 2220 Campus Drive, 1161 Cook Hall (#2036 for mail)
} Evanston, IL 60208-3108, USA
} Ph: (847) 491-6723(O), (847) 491-7806(L), Fax: (847) 467-6573
} Email: syli-at-northwestern.edu; shuyouli-at-gmail.com
} http://www.nuance.northwestern.edu/EPIC
} http://www.shuyouli.com
}
}
}
} ==============================Original Headers==============================
} 10, 16 -- From syli-at-northwestern.edu Thu Oct 13 09:55:41 2005
} 10, 16 -- Received: from merle.it.northwestern.edu (merle.it.northwestern.edu [129.105.16.57])
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} 10, 16 -- Date: Thu, 13 Oct 2005 09:57:37 -0500
} 10, 16 -- From: Shu-You Li {syli-at-northwestern.edu}
} 10, 16 -- To: microscopy-at-microscopy.com
} 10, 16 -- Subject: Anew platform for microscopists to discuss microscopy online
} 10, 16 -- Message-Id: {20051013095630.0382.SYLI-at-northwestern.edu}
} 10, 16 -- MIME-Version: 1.0
} 10, 16 -- Content-Type: text/plain; charset="US-ASCII"
} 10, 16 -- Content-Transfer-Encoding: 7bit
} 10, 16 -- X-Mailer: Becky! ver. 2.20 [en]
} ==============================End of - Headers==============================
}

==============================Original Headers==============================
7, 12 -- From jquinn-at-www.matscieng.sunysb.edu Thu Oct 13 11:49:58 2005
7, 12 -- Received: from www.matscieng.sunysb.edu (www.matscieng.sunysb.edu [129.49.36.33])
7, 12 -- by ns.microscopy.com (8.12.11/8.12.8) with ESMTP id j9DGnvQx009074
7, 12 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct 2005 11:49:57 -0500
7, 12 -- Received: (from jquinn-at-localhost)
7, 12 -- by www.matscieng.sunysb.edu (8.11.6/8.11.6) id j9DGjhF08025;
7, 12 -- Thu, 13 Oct 2005 12:45:43 -0400
7, 12 -- Date: Thu, 13 Oct 2005 12:45:43 -0400
7, 12 -- From: Jim Quinn {jquinn-at-www.matscieng.sunysb.edu}
7, 12 -- Message-Id: {200510131645.j9DGjhF08025-at-www.matscieng.sunysb.edu}
7, 12 -- To: microscopy-at-microscopy.com, syli-at-northwestern.edu
7, 12 -- Subject: re: Anew Platform..........
==============================End of - Headers==============================




From: syli-at-northwestern.edu
Date: Thu, 13 Oct 2005 12:46:31 -0500
Subject: [Microscopy] Re: Anew Platform..........

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


Thank you for your comments, Quinn and Ron-

I agree that I have much less track-record than Nestor or maybe anyone
else on the list. And I will be more than happy to terminate this forum
if MSA or another big name could have similiar bbs, or could I work
together with Nestor to create an alternative. Anyway I am providing an
option to listers.

Personally I will keep myself in this list for sure as long as we have
posts here. And I will keep my eye open on the forum I created. If you
think a web-based forum is better than email communications, I
appreciate it. If no one is willing to go there, that is fine with me
too.

BTW, Thanks for those who pointed out the broken link on registration
page. I have corrected it.

Shuyou


----------------------- Original Message -----------------------
On Thu, 13 Oct 2005 12:45:43 -0400
Jim Quinn {jquinn-at-www.matscieng.sunysb.edu} wrote:
}
} Shu-You Li
}
} I believe that your intent maybe honest,
} however, the impact will be negative.
}
} You would need a greater track-record
} before attempting to usurp this listserver.
}
} regards,
}
} JQuinn
}
} } From mail-at-ns.microscopy.com Thu Oct 13 10:52:22 2005
} } Date: Thu, 13 Oct 2005 09:56:30 -0500
} } To: jquinn-at-www.matscieng.sunysb.edu
} } From: syli-at-northwestern.edu
} } Reply-to: syli-at-northwestern.edu
} } X-Resent-From: "Microscopy Listserver" {microscopy-at-microscopy.com}
} } Subject: [Microscopy] Anew platform for microscopists to discuss microscopy online
} } Errors-To: MicroscopyListSpamFilter-at-microscopy.com
} } X-lewp: MicroscopyListSpam NAGS
} }
} }
} }
} }
} } ----------------------------------------------------------------------------
} } The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} } To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} } On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} } ----------------------------------------------------------------------------
} }
} } Dear list,
} }
} } I just created a new platform for us to discuss microscopy online using
} } Web Wiz Forums. It might be a better platform than listservers, especially
} } for those who want to reduce unnecessary emails. (I am not intending to
} } say this listserv is bad. In fact Nestor did a great job and the
} } listserv has served us for more than 10 years.) With the new online
} } forum you can still set email notification for the topics you are
} } interested in, at the same time you may ignore the topics out of
} } interest.
} }
} } Other features of this online discussion board include:
} } ***You need NOT register to post messages in most of the forums. However
} } you have to type in your name every time you post a message. Registered
} } users have full access to the website contents and functionality.
} } ***Students or any Microscopists may ask questions related to microscopy
} } in the Discussion board.
} } ***Employers may post vacant positions in the Jobs & Resumes.
} } ***Job-hunters are welcome to post their resumes too.
} } ***Users may post and discuss their recent publications in
} } recommended Readings.
} } ***Open facilities or EM consulting companies may post their contact
} } information in EM facilities nearby.
} } ***Software authors may post their beta tests or freewares/sharewares in
} } Software downloads.
} } ***Commercial companies may post their product information and contact
} } information free in EM companies
} } ***I am collecting Daily Operation Manuals for all kinds of microscopes.
} } Please send me your contributions to me. I will include your name as
} } courtesy. After I have collected sufficient amount of manuals I will put
} } them here so our users may benefit from your kindness.
} } ***Finally but not least, you may create your own customized interest
} } group in Customized Discussion Groups. You may set it as
} } access-by-authorization-only or open to everyone.
} }
} } The link to this forum is
} } http://www.ShuyouLi.com/
} }
} } I welcome all kinds of comments, suggestions and criticisms - to make
} } us microscopists feel more convenient to discuss virtually world wide.
} }
} } Thanks,
} } Shuyou Li
} }
} }
} } _____________________________
} } Shu-You Li, Ph.D.
} } Electron Microscopist, EPIC
} } NUANCE
} } Northwestern University
} } 2220 Campus Drive, 1161 Cook Hall (#2036 for mail)
} } Evanston, IL 60208-3108, USA
} } Ph: (847) 491-6723(O), (847) 491-7806(L), Fax: (847) 467-6573
} } Email: syli-at-northwestern.edu; shuyouli-at-gmail.com
} } http://www.nuance.northwestern.edu/EPIC
} } http://www.shuyouli.com
} }
} }
} }
} } ==============================Original Headers==============================
} } 10, 16 -- From syli-at-northwestern.edu Thu Oct 13 09:55:41 2005
} } 10, 16 -- Received: from merle.it.northwestern.edu (merle.it.northwestern.edu [129.105.16.57])
} } 10, 16 -- by ns.microscopy.com (8.12.11/8.12.8) with ESMTP id j9DEtfPA008880
} } 10, 16 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct 2005 09:55:41 -0500
} } 10, 16 -- Received: from [129.105.37.16] (andromeda.ms.northwestern.edu [129.105.37.16])
} } 10, 16 -- by merle.it.northwestern.edu (Postfix) with ESMTP id EE7109E847
} } 10, 16 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct 2005 09:55:40 -0500 (CDT)
} } 10, 16 -- Date: Thu, 13 Oct 2005 09:57:37 -0500
} } 10, 16 -- From: Shu-You Li {syli-at-northwestern.edu}
} } 10, 16 -- To: microscopy-at-microscopy.com
} } 10, 16 -- Subject: Anew platform for microscopists to discuss microscopy online
} } 10, 16 -- Message-Id: {20051013095630.0382.SYLI-at-northwestern.edu}
} } 10, 16 -- MIME-Version: 1.0
} } 10, 16 -- Content-Type: text/plain; charset="US-ASCII"
} } 10, 16 -- Content-Transfer-Encoding: 7bit
} } 10, 16 -- X-Mailer: Becky! ver. 2.20 [en]
} } ==============================End of - Headers==============================
} }

--------------------------------------------------------------------------


==============================Original Headers==============================
10, 19 -- From syli-at-northwestern.edu Thu Oct 13 12:46:31 2005
10, 19 -- Received: from merle.it.northwestern.edu (merle.it.northwestern.edu [129.105.16.57])
10, 19 -- by ns.microscopy.com (8.12.11/8.12.8) with ESMTP id j9DHkUMh023704
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10, 19 -- Received: from [129.105.37.16] (andromeda.ms.northwestern.edu [129.105.37.16])
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10, 19 -- Thu, 13 Oct 2005 12:46:30 -0500 (CDT)
10, 19 -- Date: Thu, 13 Oct 2005 12:48:27 -0500
10, 19 -- From: Shu-You Li {syli-at-northwestern.edu}
10, 19 -- To: Jim Quinn {jquinn-at-www.matscieng.sunysb.edu}
10, 19 -- Subject: Re: Anew Platform..........
10, 19 -- Cc: microscopy-at-microscopy.com
10, 19 -- In-Reply-To: {200510131645.j9DGjhF08025-at-www.matscieng.sunysb.edu}
10, 19 -- References: {200510131645.j9DGjhF08025-at-www.matscieng.sunysb.edu}
10, 19 -- Message-Id: {20051013123019.038B.SYLI-at-northwestern.edu}
10, 19 -- MIME-Version: 1.0
10, 19 -- Content-Type: text/plain; charset="US-ASCII"
10, 19 -- Content-Transfer-Encoding: 7bit
10, 19 -- X-Mailer: Becky! ver. 2.20 [en]
==============================End of - Headers==============================




From: frank.karl-at-degussa.com
Date: Thu, 13 Oct 2005 13:20:37 -0500
Subject: [Microscopy] TEM and precipitated silica

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html





(Lurk mode to off)

Hello everyone,

Recently I have been examining precipitated silica with the TEM (80 KV) and
have observed a complication. First I thought my scope was acting up (well
it is a little) and giving me unstable magnification. I would examine a
particle at one mag, go to a different magnification, maybe a third, come
back to the original magnification and fins my particle has grown. It
appeared to have lost detail too. Almost like popcorn expanding.

I spend a lot of time looking at calibration grids, changing magnification,
spot size and stigmating to beat the band and convinced myself the scope
was not changing magnification on me.

I prepped new samples, found a nice silica agglomerate and took a photo. I
left the beam on in and took simply took photos every once and awhile (
about every 5-8 minutes) and my little fine grain agglomerate blew up like
popcorn.

I suspect it's the chloroform I use to grind, ultrasonicate and disperse
in. The silica hold trace levels of chloroform due to H-bonding until the
beam cooks it out which causes the particle to expand, changing the shape
and size of the particle.

So... Has anyone else had this experience and more importantly does anyone
have a better method of prepping predicated silica for TEM analysis?

Thanks in advance!

Frank Karl
Degussa Corporation
Akron Technical Center
3500 Embassy Parkway
Suite 100
Akron, Ohio 44333


330-668-2235 Ext. 238


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==============================Original Headers==============================
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==============================End of - Headers==============================




From: avklaus-at-amnh.org
Date: Thu, 13 Oct 2005 13:26:35 -0500
Subject: [Microscopy] How to remove formalin

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Robert,

The below reference describes the use of critical point drying for formalin
removal from tissues for subsequent DNA extraction.

Formalin Removal from Archival Tissue by Critical Point Drying
Sheng-Guo Fang, Qiu-Hong Wan, and Noboru Fujihara
BioTechniques Vol. 33, No. 3: pp 604-611 (Sep 2002)

Best regards,

Angela

Angela V. Klaus, Ph.D.
Director, Microscopy and Imaging Facility
American Museum of Natural History
Central Park West and 79th Street
New York, NY 10024 USA

Tel: 212-769-5977
Email: avklaus-at-amnh.org

-----Original Message-----
X-from: derby-at-nmt.edu [mailto:derby-at-nmt.edu]
Sent: Thursday, October 13, 2005 11:47 AM
To: avklaus-at-amnh.org

Greetings to all,

I am a bit stumped.
I have been asked to find a way to remove formalin, from formalin fixed
viruses.
Any tips/trick/methods would be appreciated.

Thank you,

Robert Derby
New Mexico Tech.


==============================Original Headers==============================
5, 16 -- From derby-at-nmt.edu Thu Oct 13 10:46:56 2005
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5, 16 -- Date: Thu, 13 Oct 2005 09:47:45 -0600
5, 16 -- Subject: How to remove formalin
5, 16 -- From: Robert {derby-at-nmt.edu}
5, 16 -- To: {Microscopy-at-msa.microscopy.com}
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==============================Original Headers==============================
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17, 28 -- To: {derby-at-nmt.edu}
17, 28 -- Cc: {Microscopy-at-msa.microscopy.com}
17, 28 -- Subject: RE: [Microscopy] How to remove formalin
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From: smalinskas-at-yahoo.com
Date: Thu, 13 Oct 2005 14:02:57 -0500
Subject: [Microscopy] Re: viaWWW: boundary grain of Wfilament

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Vincent,

We need more information. What are you trying to
accomplish? Do you want to study grain boundary using
metallographic methods?

Stu Smalinskas, P.E.
Metallurgist
SKF USA
Plymouth, Michigan

--- vincent.metzger-at-philips.com wrote:

}
} Question: I would like to study the boundary grain
} of Wfilament of lamp. I'm searching a way to prepare
} the sample to make good observation of the grain
} boundary.


} Email: vincent.metzger-at-philips.com
} Name: vincent metzger
} Organization: philips
} Title-Subject: [Filtered] lamps filament preparation



__________________________________
Yahoo! Music Unlimited
Access over 1 million songs. Try it free.
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==============================Original Headers==============================
9, 19 -- From smalinskas-at-yahoo.com Thu Oct 13 14:02:56 2005
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9, 19 -- Date: Thu, 13 Oct 2005 12:02:54 -0700 (PDT)
9, 19 -- From: Kestutis Smalinskas {smalinskas-at-yahoo.com}
9, 19 -- Subject: Re: [Microscopy] viaWWW: boundary grain of Wfilament
9, 19 -- To: vincent.metzger-at-philips.com, microscopy-at-ns.microscopy.com
9, 19 -- In-Reply-To: {200510131338.j9DDcc3J005929-at-ns.microscopy.com}
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==============================End of - Headers==============================




From: syli-at-northwestern.edu
Date: Thu, 13 Oct 2005 14:35:48 -0500
Subject: [Microscopy] Anew Platform..........

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


I'm with Ron on this one.

Give me a managed, moderated listserver any day, I have no wish to sift
through the illiterate, ignorant ramblings which are likely to dominate for the
occasional speck of good information.

Remember all that stuff about that phony 'revolutionary' microscope -- what
was it -- the Rolfe Royale, or somesuch?

"...........why has the scientific community suppressed this important
invention?" etc, etc, etc.

What's this past tense doing in relation to Nestor, anyway?

Just an accidental grammatical imperfection, I hope.

cheers

rtch




Date sent: Thu, 13 Oct 2005 11:03:05 -0500
To: r.sims-at-auckland.ac.nz
X-from: randerson20-at-tampabay.rr.com
Send reply to: randerson20-at-tampabay.rr.com

I have received a couple of emails off list on this topic. Most of them
are fairly pertinent. I appreciate veyr much.

When comparing BBS with email listservs, we must think collectively
their pros and cons. An advantage of listserv is that we get posts in
regular email inbox so we don't need to make special effort to visit BBS,
and we are not getting too much emails from MSA. With the wonderful spam
filtration by Nestor, we get 20-30 emails all relevant to mciroscopy
everyday. It is not big deal as we receive hundreds of emails daily.

The shortage of listserv is classification and archiving. We ussually
find it difficult to find information in old communications although
Nestor has all emails archived from 1993.

Talking about the mixture of regular emails with listserv posts, it is
advantageous but also can be shortcoming. I don't know how others do but
I myself have to set a email filter to sort MSA emails to a certain
folder and, if there is no very interesting topic, I will read these
emails only when I have coffee break. It is no difference for me to go
check a website or read special MSA email folder at leisure time. Yes we
are getting not too much emails from MSA, but we should also consider
those communications off list, as those I received today on this topic
offline. Some of these communications are trully fruitful and worth
accessible by others. With BBS we don't need worry spamming the "list".

I think the key issue here is whether the topic is time-sensitive. If
the topics we are discussing need immediate response and we need never
check back the topic after the discussion, then listserv is great. For
the topics that are not time-sensitve, for example the pay-per-play EM
serivices someone asked here the other day, it might be benificial to
others who might need this information months later. In addition to
information sharing, BBS is also good on file sharing, software programs,
manuals, papers, product application notes, etc. All these kinds of
information can be saved collectively on a easy to reach website.

Although I am keen to see a success of this website, I will face the
truth and see how it goes in several months.

Thanks to all who have replied to this topic,
Shuyou
_____________________________
Shu-You Li, Ph.D.
Electron Microscopist, EPIC
NUANCE
Northwestern University
2220 Campus Drive, 1161 Cook Hall (#2036 for mail)
Evanston, IL 60208-3108, USA
Ph: (847) 491-6723(O), (847) 491-7806(L), Fax: (847) 467-6573
Email: syli-at-northwestern.edu; shuyouli-at-gmail.com
http://www.nuance.northwestern.edu/EPIC
http://www.shuyouli.com



==============================Original Headers==============================
9, 16 -- From syli-at-northwestern.edu Thu Oct 13 14:35:48 2005
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9, 16 -- Date: Thu, 13 Oct 2005 14:37:44 -0500
9, 16 -- From: Shu-You Li {syli-at-northwestern.edu}
9, 16 -- To: microscopy-at-microscopy.com
9, 16 -- Subject: re: [Microscopy] re: Anew Platform..........
9, 16 -- Message-Id: {20051013134545.0391.SYLI-at-northwestern.edu}
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==============================End of - Headers==============================




From: klivi-at-jhu.edu
Date: Thu, 13 Oct 2005 14:41:02 -0500
Subject: [Microscopy] TEM Al-Ni foil cleaning

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Does someone know of a gentle chemical etch that could be used on an
ion milled sample of Al and Ni (not alloyed) to clean its surface
(i.e., removal of ion mill contamination)?
Ciao for now,
Ken
--
Kenneth JT Livi, Ph.D.
Department of Earth and Planetary Sciences
3400 N. Charles St.
Johns Hopkins University
Baltimore, MD 21218
(410) 516-8342
(410) 516-7933 fax

==============================Original Headers==============================
1, 22 -- From klivi-at-jhu.edu Thu Oct 13 14:41:01 2005
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From: Sally.Stowe-at-anu.edu.au
Date: Thu, 13 Oct 2005 18:47:15 -0500
Subject: [Microscopy] RE: Anew platform for microscopists to discuss microscopy online

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Shu-you,
You seem to be copping a fair bit of flack for something which has obviously
taken a lot of thought and work. I think you are to be congratulated and
wish you luck, your site fills a real need, and augments rather than
"replaces" this listserver.

The problem I see is that it will take a lot of continuing work to keep
current. Many people have started, in a rush of enthusiasm, without really
achieving the critical mass and longevity needed to become "part of the
furniture" as are this listserver and the confocal equivalent. The
University of Florida "tips and tricks" site
http://www.biotech.ufl.edu/EM/tips/sem.html has the highest profile I know
of, and I visit it. Yours is more ambitious, but if you can succeed you
will give us all an important resource.

So all the best!

Sally


Dr SJ Stowe
Facility Coordinator
ANU Electron Microscopy Unit
ANU CRICOS#00120C



} -----Original Message-----
} From: syli-at-northwestern.edu [mailto:syli-at-northwestern.edu]
} Sent: Friday, 14 October 2005 12:56 AM
} To: sally.stowe-at-anu.edu.au
} Subject: [Microscopy] Anew platform for microscopists to
} discuss microscopy online
}
}
}
}
}
} ---------------------------------------------------------------
} -------------
} The Microscopy ListServer -- CoSponsor: The Microscopy
} Society of America To Subscribe/Unsubscribe --
} http://www.microscopy.com/MicroscopyListserver



==============================Original Headers==============================
11, 27 -- From sally.stowe-at-anu.edu.au Thu Oct 13 18:47:14 2005
11, 27 -- Received: from mail.rsbs.anu.edu.au (mail.rsbs.anu.edu.au [150.203.72.70])
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11, 27 -- To: {syli-at-northwestern.edu} , {microscopy-at-microscopy.com}
11, 27 -- Subject: RE: [Microscopy] Anew platform for microscopists to discuss microscopy online
11, 27 -- Date: Fri, 14 Oct 2005 09:46:56 +1000
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==============================End of - Headers==============================




From: syli-at-northwestern.edu
Date: Thu, 13 Oct 2005 19:33:38 -0500
Subject: [Microscopy] Re: Anew platform for microscopists to discuss microscopy online

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Thanks for the encouragement. I will keep this site in good shape with
continuous efforts. If necessary I will of course invite volunteers to
moderate the site together with me to keep fresh blood.

To avoid "splinter" answer-seekers and resources of the society, I put a
sticky note in the discussion board to inform new comers try this
listserv if they could not get answer from the website. In this way I
hope the website can be a compensation to the listserv but not
competition.

Some of you pointed out that I should have discussed this attempt BEFORE
creating or annoucing the presence of the site. I do appologize if the
website is totally unacceptable for some of the listers here.

With regards,
Shuyou

----------------------- Original Message -----------------------
On Fri, 14 Oct 2005 09:46:56 +1000
"Sally Stowe" {Sally.Stowe-at-anu.edu.au} wrote:
} Hi Shu-you,
} You seem to be copping a fair bit of flack for something which has obviously
} taken a lot of thought and work. I think you are to be congratulated and
} wish you luck, your site fills a real need, and augments rather than
} "replaces" this listserver.
}
} The problem I see is that it will take a lot of continuing work to keep
} current. Many people have started, in a rush of enthusiasm, without really
} achieving the critical mass and longevity needed to become "part of the
} furniture" as are this listserver and the confocal equivalent. The
} University of Florida "tips and tricks" site
} http://www.biotech.ufl.edu/EM/tips/sem.html has the highest profile I know
} of, and I visit it. Yours is more ambitious, but if you can succeed you
} will give us all an important resource.
}
} So all the best!
}
} Sally
}
}
} Dr SJ Stowe
} Facility Coordinator
} ANU Electron Microscopy Unit
} ANU CRICOS#00120C
}
}
}
} } -----Original Message-----
} } From: syli-at-northwestern.edu [mailto:syli-at-northwestern.edu]
} } Sent: Friday, 14 October 2005 12:56 AM
} } To: sally.stowe-at-anu.edu.au
} } Subject: [Microscopy] Anew platform for microscopists to
} } discuss microscopy online
} }
} }
} }
} }
} }
} } ---------------------------------------------------------------
} } -------------
} } The Microscopy ListServer -- CoSponsor: The Microscopy
} } Society of America To Subscribe/Unsubscribe --
} } http://www.microscopy.com/MicroscopyListserver
} } On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} } ---------------------------------------------------------------
} } -------------
} }
} } Dear list,
} }
} } I just created a new platform for us to discuss microscopy
} } online using Web Wiz Forums. It might be a better platform
} } than listservers, especially for those who want to reduce
} } unnecessary emails. (I am not intending to say this listserv
} } is bad. In fact Nestor did a great job and the listserv has
} } served us for more than 10 years.) With the new online forum
} } you can still set email notification for the topics you are
} } interested in, at the same time you may ignore the topics out
} } of interest.
} }
} } Other features of this online discussion board include:
} } ***You need NOT register to post messages in most of the
} } forums. However you have to type in your name every time you
} } post a message. Registered users have full access to the
} } website contents and functionality. ***Students or any
} } Microscopists may ask questions related to microscopy in the
} } Discussion board. ***Employers may post vacant positions in
} } the Jobs & Resumes. ***Job-hunters are welcome to post their
} } resumes too. ***Users may post and discuss their recent
} } publications in recommended Readings. ***Open facilities or EM
} } consulting companies may post their contact information in EM
} } facilities nearby. ***Software authors may post their beta
} } tests or freewares/sharewares in Software downloads.
} } ***Commercial companies may post their product information and
} } contact information free in EM companies ***I am collecting
} } Daily Operation Manuals for all kinds of microscopes. Please
} } send me your contributions to me. I will include your name as
} } courtesy. After I have collected sufficient amount of manuals
} } I will put them here so our users may benefit from your
} } kindness. ***Finally but not least, you may create your own
} } customized interest group in Customized Discussion Groups. You
} } may set it as access-by-authorization-only or open to everyone.
} }
} } The link to this forum is
} } http://www.ShuyouLi.com/
} }
} } I welcome all kinds of comments, suggestions and criticisms -
} } to make us microscopists feel more convenient to discuss
} } virtually world wide.
} }
} } Thanks,
} } Shuyou Li
} }
} }
} } _____________________________
} } Shu-You Li, Ph.D.
} } Electron Microscopist, EPIC
} } NUANCE
} } Northwestern University
} } 2220 Campus Drive, 1161 Cook Hall (#2036 for mail)
} } Evanston, IL 60208-3108, USA
} } Ph: (847) 491-6723(O), (847) 491-7806(L), Fax: (847) 467-6573
} } Email: syli-at-northwestern.edu; shuyouli-at-gmail.com
} } http://www.nuance.northwestern.edu/EPIC
} } http://www.shuyouli.com
} }
} }
} }
} } ==============================Original
} } Headers==============================
} } 10, 16 -- From syli-at-northwestern.edu Thu Oct 13 09:55:41 2005
} } 10, 16 -- Received: from merle.it.northwestern.edu
} } (merle.it.northwestern.edu [129.105.16.57])
} } 10, 16 -- by ns.microscopy.com (8.12.11/8.12.8) with
} } ESMTP id j9DEtfPA008880
} } 10, 16 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct
} } 2005 09:55:41 -0500
} } 10, 16 -- Received: from [129.105.37.16]
} } (andromeda.ms.northwestern.edu [129.105.37.16])
} } 10, 16 -- by merle.it.northwestern.edu (Postfix) with
} } ESMTP id EE7109E847
} } 10, 16 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct
} } 2005 09:55:40 -0500 (CDT)
} } 10, 16 -- Date: Thu, 13 Oct 2005 09:57:37 -0500
} } 10, 16 -- From: Shu-You Li {syli-at-northwestern.edu}
} } 10, 16 -- To: microscopy-at-microscopy.com
} } 10, 16 -- Subject: Anew platform for microscopists to discuss
} } microscopy online 10, 16 -- Message-Id:
} } {20051013095630.0382.SYLI-at-northwestern.edu}
} } 10, 16 -- MIME-Version: 1.0
} } 10, 16 -- Content-Type: text/plain; charset="US-ASCII"
} } 10, 16 -- Content-Transfer-Encoding: 7bit
} } 10, 16 -- X-Mailer: Becky! ver. 2.20 [en]
} } ==============================End of -
} } Headers==============================
} }

--------------------------------------------------------------------------


==============================Original Headers==============================
7, 19 -- From syli-at-northwestern.edu Thu Oct 13 19:33:38 2005
7, 19 -- Received: from merle.it.northwestern.edu (merle.it.northwestern.edu [129.105.16.57])
7, 19 -- by ns.microscopy.com (8.12.11/8.12.8) with ESMTP id j9E0XcRL031991
7, 19 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct 2005 19:33:38 -0500
7, 19 -- Received: from [129.105.37.16] (andromeda.ms.northwestern.edu [129.105.37.16])
7, 19 -- by merle.it.northwestern.edu (Postfix) with ESMTP id BB9889E844;
7, 19 -- Thu, 13 Oct 2005 19:33:37 -0500 (CDT)
7, 19 -- Date: Thu, 13 Oct 2005 19:35:34 -0500
7, 19 -- From: Shu-You Li {syli-at-northwestern.edu}
7, 19 -- To: {Sally.Stowe-at-anu.edu.au}
7, 19 -- Subject: Re: [Microscopy] Anew platform for microscopists to discuss microscopy online
7, 19 -- Cc: {microscopy-at-microscopy.com}
7, 19 -- In-Reply-To: {000101c5d050$6537bd40$9024cb96-at-rsbs.anu.edu.au}
7, 19 -- References: {200510131455.j9DEtm4b009076-at-ns.microscopy.com} {000101c5d050$6537bd40$9024cb96-at-rsbs.anu.edu.au}
7, 19 -- Message-Id: {20051013192159.0397.SYLI-at-northwestern.edu}
7, 19 -- MIME-Version: 1.0
7, 19 -- Content-Type: text/plain; charset="US-ASCII"
7, 19 -- Content-Transfer-Encoding: 7bit
7, 19 -- X-Mailer: Becky! ver. 2.20 [en]
==============================End of - Headers==============================




From: gary-at-gaugler.com
Date: Thu, 13 Oct 2005 19:49:22 -0500
Subject: [Microscopy] Re: Anew platform for microscopists to discuss

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

This is nice but I don't think that it will stand up
to the test of time.

Your GUI is good but the problem is that one
has to wonder how long you will be around relative
to Nestor. You are of a different venue than Nestor.

I'm betting on Nestor.

gary g.


At 07:57 AM 10/13/2005, you wrote:



} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America


==============================Original Headers==============================
10, 25 -- From gary-at-gaugler.com Thu Oct 13 19:49:22 2005
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10, 25 -- Date: Thu, 13 Oct 2005 17:47:16 -0700
10, 25 -- To: syli-at-northwestern.edu
10, 25 -- From: Gary Gaugler {gary-at-gaugler.com}
10, 25 -- Subject: Re: [Microscopy] Anew platform for microscopists to discuss
10, 25 -- microscopy online
10, 25 -- Cc: MSA listserver {microscopy-at-microscopy.com}
10, 25 -- In-Reply-To: {200510131457.j9DEvcWG012187-at-ns.microscopy.com}
10, 25 -- References: {200510131457.j9DEvcWG012187-at-ns.microscopy.com}
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==============================End of - Headers==============================




From: syli-at-northwestern.edu
Date: Thu, 13 Oct 2005 20:02:14 -0500
Subject: [Microscopy] Re: Anew platform for microscopists to discuss microscopy online

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

If most of us agree that BBS is a better technology than listserv, I
don't think we are lack of volunteers to maintain the forum. You are
right "time can prove all".

Thanks for the comment, anyway.
Shuyou

----------------------- Original Message -----------------------
On Thu, 13 Oct 2005 17:47:16 -0700
Gary Gaugler {gary-at-gaugler.com} wrote:
} This is nice but I don't think that it will stand up
} to the test of time.
}
} Your GUI is good but the problem is that one
} has to wonder how long you will be around relative
} to Nestor. You are of a different venue than Nestor.
}
} I'm betting on Nestor.
}
} gary g.
}
}
} At 07:57 AM 10/13/2005, you wrote:
}
}
}
} } ----------------------------------------------------------------------------
} } The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} } To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} } On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} } ----------------------------------------------------------------------------
} }
} } Dear list,
} }
} } I just created a new platform for us to discuss microscopy online using
} } Web Wiz Forums. It might be a better platform than listservers, especially
} } for those who want to reduce unnecessary emails. (I am not intending to
} } say this listserv is bad. In fact Nestor did a great job and the
} } listserv has served us for more than 10 years.) With the new online
} } forum you can still set email notification for the topics you are
} } interested in, at the same time you may ignore the topics out of
} } interest.
} }
} } Other features of this online discussion board include:
} } ***You need NOT register to post messages in most of the forums. However
} } you have to type in your name every time you post a message. Registered
} } users have full access to the website contents and functionality.
} } ***Students or any Microscopists may ask questions related to microscopy
} } in the Discussion board.
} } ***Employers may post vacant positions in the Jobs & Resumes.
} } ***Job-hunters are welcome to post their resumes too.
} } ***Users may post and discuss their recent publications in
} } recommended Readings.
} } ***Open facilities or EM consulting companies may post their contact
} } information in EM facilities nearby.
} } ***Software authors may post their beta tests or freewares/sharewares in
} } Software downloads.
} } ***Commercial companies may post their product information and contact
} } information free in EM companies
} } ***I am collecting Daily Operation Manuals for all kinds of microscopes.
} } Please send me your contributions to me. I will include your name as
} } courtesy. After I have collected sufficient amount of manuals I will put
} } them here so our users may benefit from your kindness.
} } ***Finally but not least, you may create your own customized interest
} } group in Customized Discussion Groups. You may set it as
} } access-by-authorization-only or open to everyone.
} }
} } The link to this forum is
} } http://www.ShuyouLi.com/
} }
} } I welcome all kinds of comments, suggestions and criticisms - to make
} } us microscopists feel more convenient to discuss virtually world wide.
} }
} } Thanks,
} } Shuyou Li
} }
} }
} } _____________________________
} } Shu-You Li, Ph.D.
} } Electron Microscopist, EPIC
} } NUANCE
} } Northwestern University
} } 2220 Campus Drive, 1161 Cook Hall (#2036 for mail)
} } Evanston, IL 60208-3108, USA
} } Ph: (847) 491-6723(O), (847) 491-7806(L), Fax: (847) 467-6573
} } Email: syli-at-northwestern.edu; shuyouli-at-gmail.com
} } http://www.nuance.northwestern.edu/EPIC
} } http://www.shuyouli.com
} }
} }
} }
} } ==============================Original Headers==============================
} } 10, 16 -- From syli-at-northwestern.edu Thu Oct 13 09:55:41 2005
} } 10, 16 -- Received: from merle.it.northwestern.edu
} } (merle.it.northwestern.edu [129.105.16.57])
} } 10, 16 -- by ns.microscopy.com (8.12.11/8.12.8) with ESMTP id
} } j9DEtfPA008880
} } 10, 16 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct 2005
} } 09:55:41 -0500
} } 10, 16 -- Received: from [129.105.37.16]
} } (andromeda.ms.northwestern.edu [129.105.37.16])
} } 10, 16 -- by merle.it.northwestern.edu (Postfix) with ESMTP id
} } EE7109E847
} } 10, 16 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct 2005
} } 09:55:40 -0500 (CDT)
} } 10, 16 -- Date: Thu, 13 Oct 2005 09:57:37 -0500
} } 10, 16 -- From: Shu-You Li {syli-at-northwestern.edu}
} } 10, 16 -- To: microscopy-at-microscopy.com
} } 10, 16 -- Subject: Anew platform for microscopists to discuss
} } microscopy online
} } 10, 16 -- Message-Id: {20051013095630.0382.SYLI-at-northwestern.edu}
} } 10, 16 -- MIME-Version: 1.0
} } 10, 16 -- Content-Type: text/plain; charset="US-ASCII"
} } 10, 16 -- Content-Transfer-Encoding: 7bit
} } 10, 16 -- X-Mailer: Becky! ver. 2.20 [en]
} } ==============================End of - Headers==============================

--------------------------------------------------------------------------


==============================Original Headers==============================
5, 19 -- From syli-at-northwestern.edu Thu Oct 13 20:02:13 2005
5, 19 -- Received: from merle.it.northwestern.edu (merle.it.northwestern.edu [129.105.16.57])
5, 19 -- by ns.microscopy.com (8.12.11/8.12.8) with ESMTP id j9E12D1d016887
5, 19 -- for {microscopy-at-microscopy.com} ; Thu, 13 Oct 2005 20:02:13 -0500
5, 19 -- Received: from [129.105.37.16] (andromeda.ms.northwestern.edu [129.105.37.16])
5, 19 -- by merle.it.northwestern.edu (Postfix) with ESMTP id 8A47A9E80C;
5, 19 -- Thu, 13 Oct 2005 20:02:13 -0500 (CDT)
5, 19 -- Date: Thu, 13 Oct 2005 20:04:10 -0500
5, 19 -- From: Shu-You Li {syli-at-northwestern.edu}
5, 19 -- To: Gary Gaugler {gary-at-gaugler.com}
5, 19 -- Subject: Re: [Microscopy] Anew platform for microscopists to discuss microscopy online
5, 19 -- Cc: MSA listserver {microscopy-at-microscopy.com}
5, 19 -- In-Reply-To: {6.2.3.4.2.20051013174341.02894d50-at-mail.calweb.com}
5, 19 -- References: {200510131457.j9DEvcWG012187-at-ns.microscopy.com} {6.2.3.4.2.20051013174341.02894d50-at-mail.calweb.com}
5, 19 -- Message-Id: {20051013195254.039D.SYLI-at-northwestern.edu}
5, 19 -- MIME-Version: 1.0
5, 19 -- Content-Type: text/plain; charset="US-ASCII"
5, 19 -- Content-Transfer-Encoding: 7bit
5, 19 -- X-Mailer: Becky! ver. 2.20 [en]
==============================End of - Headers==============================




From: U.J.Potter-at-ns.microscopy.com
Date: Fri, 14 Oct 2005 07:42:22 -0500
Subject: [Microscopy] viaWWW: online booking software

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (U.J.Potter) from http://microscopy.com/MicroscopyListserver/MLFormMail.html on Friday, October 14, 2005 at 04:08:26
---------------------------------------------------------------------------

Email: U.J.Potter
Name: Ursula Potter

Organization: University of Bath

Title-Subject: [Filtered] Online Booking Software for EM & LM facilities

Question: Dear all,

I would appreciate any information or user comments from those who use online booking software. I am searching for a reasonably priced system for University-wide users that enables them to book Electron Microscope, Confocal and FACs equipment housed in a central unit. I have also come across a system called phpScheduleIt which seems to be freeware although I don't quite understand how this works - any comments on this would be very helpful.

Thanks
Ursula
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From: Geoffrey_Williams-at-brown.edu
Date: Fri, 14 Oct 2005 10:02:59 -0500
Subject: [Microscopy] This new platform.... (my POV)

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear List,

I wanted to weigh in on this subject (please bear with me). As a
preface: I've been a part of many forums, mostly automotive, a few other
ones and would be an enthusiastic supporter of a UBB type forum, and
also a long time Listserver subscriber (in various locations).

In fact its an idea that I've been letting roll around in my head for a
few years - sort of hoping with all that incubation the idea might
emerge as a pearl and take hold... no it hasn't emerged and I've been
beaten to the punch. ;)

Problem is: we are a small (relatively) group, and a significant number
of the microscopy community participates or subscribes to the list.
Honestly, and maybe statistics will prove me wrong but it feels like the
listserver is slightly decreasing in traffic. Maybe on par with the
decrease in participation in local area meetings (shame on you all who
don't make the effort to serve and participate in your LAS). There
could be many causes. Or it is just my perception. And yes, like many I
have a folder in my outlook that collects the listserver emails. I do
tend to read all of them, or at least a significant number and I enjoy
absorbing new information or perspectives or ways to explain aspects of
what we all do.

But a forum style discussion group is different. Different in that you
can have real-time posting/replies without the email going through a
main server. It would cut down the times when you get replies before
the email that you sent shows up in your inbox. It also can provide
(depending on the forum set up) a format that allows easy posting of
sample images, or diagrams. Often diagnosis is facilitated by images
and a forum can provide a place to archive and share those images in a
searchable database. On the flip side, if the forum succeeds it can
disable a modest server relatively quickly. I've been involved in the
growth of many forums. One now is the leading source for TDI
information (tdiclub.com). It started as a small group and has grown
immensely. It most likely far exceeds any numbers we could hope to
attain as a microscopy forum. But the model is sound. Provide a place
for experts and novices to have real time discussion, question and
answer, with the ability to easily archive and search.

In the ideal world I think the forum should be set up with the support
of good ol' Nestor and MSA. He's done so much to keep this listserver
going and obviously has a lot invested in it, as do we all who
participate. There are quite a few here who have been on longer than my
10 or so years (I think that's about right, between the different email
accounts and all). And that is a core of email junkies. But about 6-7
years ago UBB came out with a program that changed listservers and
newsgroups forever. There are many variations and I'm sure most
everyone has seen/participated in one type of forum or another. The
success of a forum is 100% dependent on the core users, and the
collective participation/knowledge. I believe a microscopy forum could
survive and do well and provide a valuable resource, and potentially
could easily exist in tandem with the listserver, maybe even with MT or
other publications.

Maybe Shuyou's forum is premature, maybe not. The data can easily be
converted to different forum structures. It interface is easily
modified and the archiving and searching is a breeze, depending on
software and server structure.

Also, important to make note. A Forum can be made as secure and private
(more so even) than a listserver. The administrator can grant access to
view the discussion threads to only registered users. They can set it
up to allow only registered users to post. They can also filter and
restrict and monitor requests for usernames. All that without a huge
amount of work. Okay there is a little bit of work, esp as the group
gets larger. However, a forum of 38,000 registered users is well
maintained by two administrators and a host of moderators. Typically one
moderator per topic/discussion area, and it would probably be reasonably
easy to agree upon one or two people with distinct experiences who could
easily moderate the content in say an SEM or TEM forum. Very simple,
very elegant.

My final words on this subject (for this email)... ;-)
I'm of the opinion that listservers are a dinosaur. Kind of like 667
polaroid film. Yes, they still work to convey information, but: there
are more modern methods to do the same thing, saving everyone on all
ends much time and space. No more deleting emails you don't want to
read - no more worring about finding the right topic, flame wars and
arguments about who knows what (like this) can be sequestered or allowed
to come to completion without filling everyone's inbox. Until there is
a viable alternative up on the 'net, I will faithfully read and
contribute to the Listserver in its current and future forms.

Just a few of my thoughts,

With deep respect for the Listserver and the members here,
Geoff


Geoff Williams
Leduc Bioimaging Facility Manager
Brown University

http://www.brown.edu/Facilities/Leduc_Bioimaging_Facility/



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From: scanning-at-fams.org
Date: Fri, 14 Oct 2005 13:55:21 -0500
Subject: [Microscopy] SCANNING 2006 Announcement

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Listers,

Just a quick announcement inviting you all to attend SCANNING 2006,
Tuesday, April 25 through Thursday, April 27 in Washington, D.C. The
location is prime--just two doors down from The White House--and the
meeting promises to be an excellent scientific forum. We encourage
everyone to submit an abstract. THE DEADLINE FOR ABSTRACT SUBMISSION IS
JANUARY 18, 2006.

A preliminary program is below for your review and we hope to see you
there! Note the brand new course by Alan Boyde and new sessions being
held by Ken Moore (Morphology Core), Elaine Humphrey (Univ. of BC),
Robert Carlton (GlaxoSmithKline), Bev Giammara (Univ. of Louisville),
Terry Allen (Christie Hospital NHS Trust), Warren MoberlyChan (Lawrence
Livermore National Labs), Dale Newbury (NIST), Rob Apkarian (Emory
Univ.), and Bruno Frohlich (Smithsonian Institution).

To download a more comprehensive Preliminary Program including
summaries and the Registration Form or additional information, please
visit www.scanning.org.

Among the Sessions and Courses
SCANNING 2006—Washington, D.C., • April 25–27, 2006

Special New Course:

Skeletal Tissue Structural Biology and the Contribution and Potential
of the Scanning Microscopies–NEW!
Chair: Alan Boyde, Barts and the London School of Medicine and
Dentistry and Queen Mary University of London, London, U.K.
 
The Role of Scanning Microscopies in the Study of Disease—NEW SESSION!
Chair: Kenneth C. Moore, Morphology Core, Iowa City, Iowa, USA

Microwave in Microscopy–NEW SESSION!
Chairs: Elaine Humphrey, University of British Columbia, Vancouver, BC
and Beverly Giammara, University of Louisville School of Medicine,
Louisville, Kentucky, USA

SEM of Biomaterials and Biomedical Devices–NEW SESSION!
Chair: Robert Apkarian, Emory University, Atlanta, GA, USA

Applications of Environmental and Low Vacuum SEM in the Pharmaceutical
Industry—NEW SESSION!
Robert A. Carlton, GlaxoSmithKline, King of Prussia, PA, USA

Microscopies for the Structural and Dynamic Organization of the
Nucleus—NEW SESSION!
Chair: Terry D. Allen, Paterson Institute for Cancer Research, Christie
Hospital NHS Trust, Manchester, U.K.

Forensic Science with a Special GSR Segment
Chairs: S. Frank Platek, National Forensic Chemistry Center, U.S. Food
and Drug Administration; M.A. Trimpe, Hamilton County Coroner’s Office,
Cincinnati, OH, USA

Focused Ion Beam Microscopy
Chair: Warren J. MoberlyChan, Materials Science and Technology
Division, Lawrence Livermore National Laboratory, Livermore, CA, USA

Electron Beam/Specimen Interaction Workshop
Chair: Dr. Michael T. Postek, Leader, Nano Scale Metrology, National
Institute of Standards and Technology, Gaithersburg, MD, USA
 
The Electron Beam/Specimen Interaction Workshop has brought
experimentalists and modeling experts together for nearly a decade to
share information on this exciting topic.

Advances in Electron Beam Microanalysis of Individual Particles
Chair: Dale E. Newbury NIST, Gaithersburg, MD, USA

Biological and Biomedical Applications of Scanning Microscopy
Chair: Timothy Maugel, Laboratory for Biological Ultrastructure,
Biology Department, University of Maryland, College Park, MD, USA

Scanning Museum Objects: Research, Documentation, and Preservation
Chair: Bruno Frohlich, National Museum of Natural History, Smithsonian
Institution, Washington, D.C., USA

Among the Short Courses:

Tuesday, April 25

Scanning Microscopy in Forensic Science
Chairs: S. Frank Platek, National Forensic Chemistry Center, U.S. Food
and Drug Administration, Cincinnati, OH; Michael T. Postek, US
DOC-NIST, Gaithersburg, MD, M.A. Trimpe, Hamilton County Coroner’s
Office, Cincinnati, OH, USA, and Michael McVicar, Chemistry Section
Scientist, Center of Forensic Sciences, Ontario, Canada

Wednesday, April 26

Introduction to AFM—Sponsored by Pacific Nanotechnology, Inc. (Two-Day
Course)
Chair: Paul West, Pacific Nanotechnology, Inc., Tustin, CA, USA

Introduction to AFM (continued)—Sponsored by Pacific Nanotechnology,
Inc. (Two-Day Course)
Chair: Paul West, Pacific Nanotechnology, Inc., Tustin, CA, USA

Advanced Topics in SEM
Chairs: D.C. Joy, Department of Biochemistry, Cellular and Molecular
Biology, University of Tennessee, Knoxville, TN, USA; O. C. Wells,
Yorktown Heights, NY, USA

Thursday, April 27

Mastering the Digital Image–NEW COURSE!
Chair: J. Christian Russ, Reindeer Graphics, Asheville, NC, USA

Quantitative Measurements—Sponsored by Pacific Nanotechnology, Inc.
(Half Day Course)
Chair: Paul West, Pacific Nanotechnology, Inc., Tustin, CA, USA

Materials Sciences Applications—Sponsored by Pacific Nanotechnology,
Inc. (Half Day Course)
Chair: Paul West, Pacific Nanotechnology, Inc., Tustin, CA, USA

Best regards,


Phaedra McGuinness
Managing Editor
SCANNING, The Journal of Scanning Microscopies
P.O. Box 485
Mahwah, NJ 07430
Tel: (201) 818-1010 * Fax: (201) 818-0086 *email: scanning-at-fams.org *
Web: www.scanning.org


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From: dale_batchelor-at-ncsu.edu
Date: Fri, 14 Oct 2005 16:01:00 -0500
Subject: [Microscopy] AReMS 2005 Meeting

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear collegues,
You are invited to the Appalachian Regional Microscopy Society (AReMS)
2005 Fall Meeting at the Broyhill Inn and Conference Center, Boone, NC.

Theme: Nanoparticles in Biomedicine, Electronics & Material Science

Thursday, October 20, 2005

2:30-4:30 pm
Workshop: Optical Microscopy at Sub-100nm Resolution,  
Rene Salazar, Aetos Technologies, Inc.

2:30-4:30 pm
Workshop: Force Measurements and Pulling Using an Atomic Force
Microscope, Keith Jones, Asylum Research

6:00-7:00 pm
Social: Integon Room at the Broyhill Inn

7:00-8:00 pm
Dinner: Bernhardt Room at the Broyhill Inn

8:00-9:00 pm
Dinner talk by Keynote speaker: Dale Newbury, National Institute of
Standards & Technology: “Not Just a Pretty Picture: X-ray Mapping is 50
Years Young, the Best is Yet to Come, and the Future is Now!”


Friday, October 21, 2004, Powers North (formerly Trillium North) Room

8:00-8:10 am
Welcome, President Lou Germinario

8:15-8:45 am
James Wittig, Vanderbilt University: “Metallic and Semiconducting
Nanoparticles for Biomedical Applications”

8:50-9:20 am
Jonathan Bender, University of South Carolina: “Nanotribology Study of
Ultra-high Molecular Polyethylene”

9:25-9:55 am
Dale Newbury, National Institute of Standards & Technology: “Blunders
in Automatic Peak Identification of Major Constituents by
Electron-excited Energy Dispersive X-ray Microanalysis”

10:15-10:30 am
Introduction of Posters

10:35-11:05 am
Richard Spontak, NC State University: “Direct Visualization of
Polymer-Polymer Dewetting in the Presence of a Block Copolymer: From
Macroscopic to Microscopic Mechanisms”

11:10-11:25 am
Break and Posters Session

11:30-12:00 pm
Sarah White, Hitachi High Technology: "Low Voltage STEM Imaging and
Analysis of Catalysts, Nanoparticles, Nanomaterials, and Nanolayers"
 
For more information or to register online visit the website
www.arems.org
To register by phone call Sam Pennington at 704-825-8261 or by email at
shpennington-at-alliedhightech.com



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20, 20 -- From: Dale Batchelor {dale_batchelor-at-ncsu.edu}
20, 20 -- Subject: [Microscopy] AReMS 2005 Meeting
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From: bucana-at-audumla.mdacc.tmc.edu
Date: Fri, 14 Oct 2005 16:44:15 -0500
Subject: [Microscopy] need help preparing intestinal villi for SEM and morphometry

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi All,

One of our investigators is working on knockout mice whose intestinal villi
are longer than those seen in wild type mice. She wants to show these by
SEM and hopefully also measure the average height of the villi. The
problem is how to prepare the intestine so that some of the villi are
standing up and how to obtain preparations that will allow measurement of
the villi.

I welcome any suggestions or references if you know of some older references.

Thanks,

Cora Bucana


==============================Original Headers==============================
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6, 19 -- To: Microscopy-at-microscopy.com
6, 19 -- From: "Corazon D. Bucana" {bucana-at-audumla.mdacc.tmc.edu}
6, 19 -- Subject: need help preparing intestinal villi for SEM and morphometry
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From: ard-at-ansto.gov.au
Date: Fri, 14 Oct 2005 18:08:54 -0500
Subject: [Microscopy] Re: This new platform....

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Some of us are now receiving unsolicited private invitations from
yahoo to join this new forum. It seems that behind Shuyou lurks our
old friend Mr Sergey Ryazantsev complete with a considerable amount
of political baggage in the invitation message with regard to Nestor
and the current listserver. Therefore one needs to question the
motives behind such an initiative, its stability, and its likely
endurance into the future.

This list has been running very well almost since electricity was
invented, thanks to Nestor, who for all we know may well have even
invented electricity once. I'm staying with this platform, thanks.


==============================Original Headers==============================
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From: shashis_99-at-yahoo.com
Date: Fri, 14 Oct 2005 23:46:00 -0500
Subject: [Microscopy] Re: need help preparing intestinal villi for SEM and morphometry

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


Dear Cora,
You could do TEM studies of it and measure the
villus length, that's what my colleague did for
starvation stress in mice, where the villus size
changes.
shashi
CCMB
Hyderabad INDIA
--- bucana-at-audumla.mdacc.tmc.edu wrote:

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} Hi All,
}
} One of our investigators is working on knockout mice
} whose intestinal villi
} are longer than those seen in wild type mice. She
} wants to show these by
} SEM and hopefully also measure the average height of
} the villi. The
} problem is how to prepare the intestine so that some
} of the villi are
} standing up and how to obtain preparations that will
} allow measurement of
} the villi.
}
} I welcome any suggestions or references if you know
} of some older references.
}
} Thanks,
}
} Cora Bucana
}
}
} ==============================Original
} Headers==============================
} 6, 19 -- From bucana-at-audumla.mdacc.tmc.edu Fri Oct
} 14 16:44:14 2005
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} 6, 19 -- Date: Fri, 14 Oct 2005 16:46:33 -0500
} 6, 19 -- To: Microscopy-at-microscopy.com
} 6, 19 -- From: "Corazon D. Bucana"
} {bucana-at-audumla.mdacc.tmc.edu}
} 6, 19 -- Subject: need help preparing intestinal
} villi for SEM and morphometry
} 6, 19 -- Mime-Version: 1.0
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__________________________________________________
Do You Yahoo!?
Tired of spam? Yahoo! Mail has the best spam protection around
http://mail.yahoo.com

==============================Original Headers==============================
5, 20 -- From shashis_99-at-yahoo.com Fri Oct 14 23:45:59 2005
5, 20 -- Received: from web54615.mail.yahoo.com (web54615.mail.yahoo.com [206.190.49.185])
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5, 20 -- From: shashi singh {shashis_99-at-yahoo.com}
5, 20 -- Subject: Re: [Microscopy] need help preparing intestinal villi for SEM and morphometry
5, 20 -- To: bucana-at-audumla.mdacc.tmc.edu
5, 20 -- Cc: microscopy-at-microscopy.com
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From: gwe-at-ufl.edu
Date: Sat, 15 Oct 2005 09:15:51 -0500
Subject: [Microscopy] Biotech Director Job

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Director and professor

The mission of the Interdisciplinary Center for Biotechnology
Research (ICBR) is to support the growth of the life science research
program of the University of Florida and that of researchers
throughout the state, by making widely available the needed
facilities, technologies, training, and competent personnel. ICBR is
a service-oriented organization. The Director will manage the
personnel and core facilities in support of the research faculty
across all the colleges and departments of the University of Florida.

Interested candidates may contact me or go to this site and search
the academic positions.
http://jobs.ufl.edu/.


Gregory W. Erdos, Ph.D.
Assistant Director, Interdisciplinary Center for Biotechnology Research
Scientific Director, Electron Microscopy Core Lab
P.O. Box 118525
University of Florida
Gainesville, FL 32611
Phone: 352-392-1295
Fax: 352-846-0251
Email: gwe-at-ufl.edu


==============================Original Headers==============================
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6, 20 -- From: Greg Erdos {gwe-at-ufl.edu}
6, 20 -- Subject: Biotech Director Job
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From: winston.wiggins-at-cshs.org
Date: Sat, 15 Oct 2005 10:05:18 -0500
Subject: [Microscopy] viaWWW: Nikon Small World Photomicrography competition

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (winston.wiggins-at-cshs.org) from http://www.microscopy.com/MLFormMail.html on Friday, October 14, 2005 at 11:06:29
---------------------------------------------------------------------------

Email: winston.wiggins-at-cshs.org
Name: Winston Wiggins

Organization: Cedars-Sinai Medical Center, Los Angeles, CA

Title-Subject: [Filtered] MListserver: Nikon Small World Photomicrography competition

Question: Since 1974, Small World has assembled panels of scientists and photo editors to honor the best and brightest in the field of photomicrography,... Small World unabashedly celebrates the aesthetic side of what the microscope sees and the camera records... a chance for scientists to be celebrated as artists. "Scientists can face a long, arduous, technical road to scientific discovery," Eric Flem, who runs the Small World show, says. "But along the way, these guys see some absolutely beautiful images."

~ excerpt from "Mama Don't Take My Microscope" at http://www.wired.com/news/culture/0,1284,69191,00.html.


---------------------------------------------------------------------------

==============================Original Headers==============================
8, 12 -- From zaluzec-at-microscopy.com Sat Oct 15 10:05:18 2005
8, 12 -- Received: from [206.69.208.22] (mac22.zaluzec.com [206.69.208.22])
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8, 12 -- Date: Sat, 15 Oct 2005 10:05:17 -0500
8, 12 -- To: microscopy-at-microscopy.com
8, 12 -- From: winston.wiggins-at-cshs.org (by way of MicroscopyListserver)
8, 12 -- Subject: viaWWW: Nikon Small World Photomicrography competition
8, 12 -- Content-Type: text/plain; charset="us-ascii"
==============================End of - Headers==============================




From: s2kdude-at-pacbell.net
Date: Sat, 15 Oct 2005 13:20:48 -0500
Subject: [Microscopy] This new platform....

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Competition is healthy and another source of help is
always welcome. We'd all be still using candles if it
wasnt for people like Edison coming up with
alternatives for us to chose.

--- ard-at-ansto.gov.au wrote:

}
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}
} Some of us are now receiving unsolicited private
} invitations from
} yahoo to join this new forum. It seems that behind
} Shuyou lurks our
} old friend Mr Sergey Ryazantsev complete with a
} considerable amount
} of political baggage in the invitation message with
} regard to Nestor
} and the current listserver. Therefore one needs to
} question the
} motives behind such an initiative, its stability,
} and its likely
} endurance into the future.
}
} This list has been running very well almost since
} electricity was
} invented, thanks to Nestor, who for all we know may
} well have even
} invented electricity once. I'm staying with this
} platform, thanks.
}
}
} ==============================Original
} Headers==============================
} 3, 24 -- From ard-at-ansto.gov.au Fri Oct 14 18:08:54
} 2005
} 3, 24 -- Received: from tachyon.gw.ansto.gov.au
} (tachyon.gw.ansto.gov.au [137.157.8.253])
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} {microscopy-at-microscopy.com}
} 3, 24 -- From: Arthur Day {ard-at-ansto.gov.au}
} 3, 24 -- Subject: Re: This new platform....
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}


==============================Original Headers==============================
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4, 19 -- Subject: Re: [Microscopy] Re: This new platform....
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4, 19 -- In-Reply-To: {200510142314.j9ENEeKw026600-at-ns.microscopy.com}
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From: jfactor-at-ns.purchase.edu
Date: Sat, 15 Oct 2005 13:58:20 -0500
Subject: [Microscopy] Anew platform for microscopists to discuss

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

A few additional points about the Microscopy Listserver.
* I would hate to have to go looking for info, or have to specify
topics of interest (it's all potentially interesting). Given my other
obligations, I would be much less likely to seek out the info, but I'm
happy to have it thrust in front of me. When I'm too busy, I simply
ignore the list message that day.
* I enjoy opening my email to all sorts of interesting questions,
answers, and discussion about various aspects of microscopy. It's all
right there. Sure, much of the discussion is not of interest to me at
the moment, but I learn lots by perusing the emails, even on topics I
would not have thought of as being interesting.
* The point has already been made that it's not such a large traffic
volume as to be unmanageable, and it's easy enough to hit the delete
button based on the message subject line. One could even set the junk
mail filter to automatically identify the list messages, then un-junk
the ones of interest, and auto-delete all the rest with one click.
* In other words, there are some real advantages to the email listserve
format. If there are real needs for additional capabilities, such as a
place to post image files that are referenced in the emails, perhaps
Nestor could take with up with MSA.
* Finally, I will add my "thank you!" to Nestor for maintaining such a
useful list as a public service, in spite of the occassional complaint
and with little thanks (I'm sure).
--Jan Factor

---------------------------------------
Jan Robert Factor, Ph.D.
Professor of Biology
---------------------------------------
Natural Sciences
Purchase College
State University of New York
735 Anderson Hill Rd.
Purchase, NY 10577
USA
---------------------------------------
Office Tel: 914-251-6659
Office Fax: 914-251-6635
E-mail: jfactor-at-ns.purchase.edu
or- jan.factor-at-purchase.edu
---------------------------------------

==============================Original Headers==============================
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2, 23 -- Date: Sat, 15 Oct 2005 14:58:24 -0400
2, 23 -- From: Jan Factor {jfactor-at-ns.purchase.edu}
2, 23 -- Subject: Re: [Microscopy] RE: Anew platform for microscopists to discuss
2, 23 -- microscopy online
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From: opto-at-klughammer.de
Date: Sat, 15 Oct 2005 14:21:31 -0500
Subject: [Microscopy] Re: Anew platform for microscopists to discuss

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

That's exactly how I see it.

Anna E. Schmaus
klughammer bio gmbh


jfactor-at-ns.purchase.edu schrieb:

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==============================Original Headers==============================
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From: per.horstedt-at-medbio.umu.se
Date: Sat, 15 Oct 2005 18:53:34 -0500
Subject: [Microscopy] Re: This new platform....

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Add my voice to this chorus. I agree that this format allows me the
extra pleasure of serendipity as well as choice.

Joel


Date sent: Sat, 15 Oct 2005 14:21:39 -0500
To: jbs-at-temple.edu
X-from: opto-at-klughammer.de
Send reply to: opto-at-klughammer.de

Sure, but how come you always light the candles when the electricity
fails.......


Cheers,
Per

Per Horstedt
Inst of medical biosciences Pathology
Dept of electron microscopy
University of Umea
S-90185 Umea
Sweden











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==============================Original Headers==============================
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From: loz_jay01-at-hotmail.com
Date: Sun, 16 Oct 2005 09:27:53 -0500
Subject: [Microscopy] AskAMicroscopist: procedure scientists use to look at

Contents Retrieved from Microscopy Listserver Archives
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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (loz_jay01-at-hotmail.com) from http://www.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Sunday, October 16, 2005 at 06:59:58
---------------------------------------------------------------------------

Email: loz_jay01-at-hotmail.com
Name: laura

Organization: richard lander school

Education: 9-12th Grade High School

Location: truro,cornwall

Question: please could you tell me what procedure scientists use to look at cancer cells under the microscope

---------------------------------------------------------------------------

==============================Original Headers==============================
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7, 12 -- From: loz_jay01-at-hotmail.com (by way of Ask-A-Microscopist)
7, 12 -- Subject: AskAMicroscopist: procedure scientists use to look at
7, 12 -- Content-Type: text/plain; charset="us-ascii"
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From: michael-at-shaffer.net
Date: Sun, 16 Oct 2005 12:31:14 -0500
Subject: [Microscopy] Image analysis - separating touching particles

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I am using a particular software for determining particle (and included
grains) identification. For separating touching particles the software
offers parameterization of 3 criteria: 'F', for control with regard to
features across the surface (e.g., cracks); 'T', for controlling particles
touching at a point; and 'E', for some control of particles touching along
longer joins. What makes the parameters a bit difficult to experiment with
is the number of permutations ... That is, the are 3 parameters for 'F' and
3 for 'E', for 7 total.

Does anyone recognize these parameters, such that they may provide me with a
reference for understanding parameter values and how they may affect one
another?

TIA ... michael shaffer :o)
Memorial University
St. John's Newfoundland


==============================Original Headers==============================
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4, 19 -- From: "michael shaffer" {michael-at-shaffer.net}
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4, 19 -- Subject: Image analysis - separating touching particles
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From: mardre-at-mardre.com
Date: Mon, 17 Oct 2005 07:00:30 -0500
Subject: [Microscopy] Balzers 400D Freeze Fracture available

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Cora

can you just clarify whether it is the villi you are trying to measure
or the microvilli, because villi would be better done by some form of
light microscopy.

Thanks
Malcolm

Malcolm Haswell
e.m. unit
School of Health, Natural and Social Sciences
University of Sunderland
Tyne & Wear
SR1 3SD
UK

e-mail: malcolm.haswell-at-sunderland.ac.uk


----- Original Message -----
X-from: shashis_99-at-yahoo.com

Dear Ursala

I had a look at phpScheduleIt previously but it is Unix based and apparently
needs an Apache web server ('Is that a helicopter dear?' - we're out of them
at the moment anyway).

I did think of doing something clever with Access, but ultimately we do fine
with separate A4 sheets, produced in word, one page per week, one month in
advance. The sheets are located outside the microscope rooms in a
wall-mounted clear plastic A4 display folders (with a pencil and a rubber).
It works better than a diary at least, and 'this week' only is 'on view'. It
also means you don't need a network linked laptop to see if the microscope
is free, and the 'hard copies' are easy to read. However if anyone has any
facility management software that's virtually free (and not £500 like most
on the web), I would be interested (possibly).

Keith

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk


----- Original Message -----
X-from: {U.J.Potter-at-ns.microscopy.com}
To: {keith.morris-at-ucl.ac.uk}
Sent: Friday, October 14, 2005 1:48 PM

Available - complete Balzers 400D Freeze Fracture System with:

- electron beam guns EK552 for Pt-C and C,
- quartz crystal thin film monitor QSD-201D
- freeze etching unit control BMS101,
- HT unit control EVM052,
- pumping unit control DPA101,
- power distributor BNV201
- rotary pump (Pfeiffer DUO030A)
- liq. nitrogen supply FET003
- threefold specimen table for cleaving
- double replica specimen table for simultaneous breaking up of 3 sandwich carrier


Also included are
- extra HT unit control EVM052,
- extra freeze etching unit control GA-1,
- extra quartz crystal thin film monitor QSG101


Must move immediately for best offer.

Have a view of the device at http://www.mardre.com/homepage/mic/tem/equipment/baf400.html




*******************************************
Dr. Markus Drechsler
Electronmicroscopy
SFB481/BIMF/BZKG
University of Bayreuth, NW2
Universitaetsstr. 30
D-95440 Bayreuth
Tel: +49 (0)921 55-3188
Fax: +49 (0)921 55-3116

e-mail:
Markus.Drechsler-at-uni-bayreuth.de
mardre-at-mardre.com

http://www.uni-bayreuth.de/departments/mcii
http://www.mardre.com

*******************************************


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15, 32 -- To: Microscopy-at-microscopy.com
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From: oxfordmaterials-at-hotmail.com
Date: Mon, 17 Oct 2005 07:57:56 -0500
Subject: [Microscopy] AskAMicroscopist: undergraduate Team Design Project for SEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was
submitted by (oxfordmaterials-at-hotmail.com) from
http://microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on
Monday, October 17, 2005 at 05:39:54
---------------------------------------------------------------------------

Email: oxfordmaterials-at-hotmail.com
Name: Mike Dowling

Organization: Department of Materials, Oxford University

Education: Undergraduate College

Location: Oxford, UK

Question: I am currently heading a third-year undergraduate Team
Design Project at the Materials Department of Oxford University; our
aim being to
design a hypothetical SEM stage and environmental cell for in-situ CVD
synthesis and
observation of carbon nanotubes.

We would intend to grow the tubes in a low pressure (approx 1.5 Torr)
methane
environment, between 700 and 1100C. This hypothetical design currently
includes a
water-cooled heating stage equipped with screens to contain thermally
emitted electrons, which would hopefully also contain the gases
sufficiently, and negate the need for an expensive environmental cell unit.

We believe that this technology would be useful for studying nanotubes, but
could also be adapted to form a stage that would fit inside any existing
SEM for a variety of different high temperature dynamic reactions.

We would be
very grateful to recieve any help, ideas or advice that you may have at
oxfordmaterials-at-hotmail.com.

Thank you very much for your time,

Mike Dowling et al.
Department of Materials,
Oxford University.


---------------------------------------------------------------------------

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From: sksears-at-eps.mcgill.ca
Date: Mon, 17 Oct 2005 09:12:30 -0500
Subject: [Microscopy] Re: online booking software

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

A very good online scheduling system developed and maintained by the Complex Carbohydrate Research Center at The University of Georgia is offered free to users. The URL is http://faces.ccrc.uga.edu/. You can click on the 'Join Us' or 'FAQs' for more information.

Regards,

S. Kelly Sears



keith.morris-at-ucl.ac.uk wrote:

}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America



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From: a.chuvilin-at-microscopist.ru
Date: Mon, 17 Oct 2005 09:27:46 -0500
Subject: [Microscopy] TEM Postdoc positions

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Listers,

Two postdoctoral research associate positions are now opened is the group of
material science within the Center of Electron Microscopy of Ulm University
(Germany).

Positions are related to research projects devoted to the study of magnetic
nanomaterials and nanoporous oxides.
The main research instrument for these studies will be Titan 80-300 (HAADF
STEM detector, imaging Cs-corrector, Tridiem GIF, biprizm and Lorenz lens),
which is currently under installation in Ulm uni. There is a number of other
instruments in the Center, including CM20 TEM with heating and cooling
holders and Hitachi S5200 high resolution SEM.

Deadline for applications is 21st of November 2005.
Details can be found at http://www.uni-ulm.de/elektronenmikroskopie/mattem
following the link "Vacancies".

_________________
Andrey Chuvilin, PhD
University Ulm
Zentrale Einrichtung Elektronenmikroskopie
Materialwissenschaftliche Elektronenmikroskopie
Albert Einstein Allee 11
D-89069 ULM
Tel.: ++49-731-50-22941
Fax.: ++49-731-50-22958
Email: andrey.chuvilin-at-uni-ulm.de
http://www.uni-ulm.de/elektronenmikroskopie/mattem/


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6, 24 -- Subject: TEM Postdoc positions
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From: ineke.joosten-at-icn.nl
Date: Mon, 17 Oct 2005 10:31:59 -0500
Subject: [Microscopy] Betr.: viaWWW: JEOL Cross section polisher

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html






The AMOLF FOM Institute for Atomic and Moleculair physics (Amsterdam, The
Netherlands) has purchased one only recently. You could contact Jaap Boon
for more information J.Boon-at-amolf.nl. However, the AMOLF is not a service
lab!





Ineke Joosten

onderzoeker afdeling Onderzoek/researcher department of Research
Instituut Collectie Nederland/Netherlands Institute for Cultural Heritage
Postbus 76709, 1070 KA Amsterdam/P.O. Box 76709, 1070 KA Amsterdam, The
Netherlands
T +31 (0)20 305 46 88/728
F +31 (0)20 305 47 00
E ineke.joosten-at-icn.nl

Het ICN is onderdeel van het Ministerie van OCW/ICN is part of the Ministry
of Education, Culture and Science
Zie voor meer informatie www.icn.nl/For more information see www. icn.nl
Aan deze email kunnen geen rechten worden ontleend/No rights may be derived
from this e-mail


==============================Original Headers==============================
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From: eggert-at-mikroanalytik.de
Date: Mon, 17 Oct 2005 12:25:18 -0500
Subject: [Microscopy] microanalysis service labs

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi listers,

this is an information for those members who are a part of a public /
semi-public microanalysis service lab (electron microscope and/or x-ray
spectrometer equipment). If there is the wish to put the service offer
publicly, then you will find a new site to post your message without any
fees:


http://microanalysis.mikroanalytik.de/service%20microanalysis%20e.phtml

The site has the aim to bring people with microanalytical problems
together with them, who have the equipment and the possibility to solve
the analytic task.

Best regards

F.Eggert

============================
www.microanalyst.net
============================


==============================Original Headers==============================
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From: cammer-at-aecom.yu.edu
Date: Mon, 17 Oct 2005 14:14:07 -0500
Subject: [Microscopy] Accu-Scope 3016?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

One of my colleagues is looking for an inexpensive fluorescent scope for
screening cells.

If you have any personal experience with the Accu-Scope 3016 or another
model (preferably with infinity corrected optics according to the brochure
at http://www.microscopestore.com/info/3015.pdf ) and you are not a vendor
of the microscope, we would greatly appreciate your feedback.

Thanks!

____________________________________________________________________________
Michael Cammer Analytical Imaging Facility Albert Einstein Coll. of Med.
Jack & Pearl Resnick Campus 1300 Morris Park Ave. Bronx, NY 10461
(718) 430-2890 Fax: 430-8996 URL: http://www.aecom.yu.edu/aif/
**This electronic transmission contains information that is privileged.**


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From: GBurgess-at-exchange.hsc.mb.ca
Date: Mon, 17 Oct 2005 15:57:09 -0500
Subject: [Microscopy] Neutralizing Glutaraldehyde

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


I would be interested in what people use to neutralize their glutaraldehyde
for hazardous waste removal. This would be 2.5% buffered glut. as used to
fix human biopsy tissue.



Garry Burgess
Charge Technologist
Health Sciences Centre
Winnipeg

This e-mail and/or any documents in this transmission is intended for the address(s) only and may contain legally privileged or confidential information. Any unauthorized use, disclosure, distribution, copying or dissemination is strictly prohibited. If you receive this transmission in error, please notify the sender immediately and return the original.

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From: jeremiah.tyler-at-us.army.mil
Date: Mon, 17 Oct 2005 17:47:33 -0500
Subject: [Microscopy] [Filtered] AskAMicroscopist: pursuing a degree in criminal

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was
submitted by (jeremiah.tyler-at-us.army.mil) from
http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html
on Monday, October 17, 2005 at 16:16:22
---------------------------------------------------------------------------

Email: jeremiah.tyler-at-us.army.mil
Name: Jeremiah Tyler

Organization: Central Texas College

Education: Undergraduate College

Location: Panama City Beach, FL

Question: I am pursuing a degree in criminal investigation and as an
assignment I was to research the MSA website and submit my findings
to my fellow students in a discussion board. I understand microscopy
is a way of looking at items that are smaller than the eye can see
and to get a grasp on the application of microscopy in regards to CSI
is difficult for me since I am a visual person. What would be some
ways an investigator could utilize the services of a criminal
investigator?

---------------------------------------------------------------------------

==============================Original Headers==============================
7, 13 -- From zaluzec-at-microscopy.com Mon Oct 17 17:47:33 2005
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From: James.Roberts-at-ventura.org
Date: Mon, 17 Oct 2005 19:00:10 -0500
Subject: [Microscopy] Re: [Filtered] AskAMicroscopist: pursuing a degree

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Jeremiah,

I'm not sure of the exact question you are asking. But if you are
asking how microscopy is used in the analysis of evidence, which is what
I think you are trying to get at, here are a few examples. Our trace
unit uses microscopy in most of it's analysis types. They use stereo
microscopes extensively just to characterize the evidence. Phase
contrast, polarized light and fluorescence microscopy is used for
different types of evidence. An example of this is that fibers would be
examined using a polarized light microscope to determine if it is
natural or synthetic. They use a comparison microscope to compare the
characteristics of a known and unknown fiber. The Scanning Electron
Microscope/ Energy dispersive spectrometer (SEM/EDS) is used for both
visual and elemental analysis of many evidence types, such as analysis
of GSR from hands or to characterize the trace materials that prove
ricochet when found embedded in the side of a bullet. Our Forensic
Biology unit uses microscopes to exam for the presence of sperm in rape
cases. We might use a video microscope unit to examine an area on a car
for paint transfer of to help do examination and measurements in blood
pattern analysis cases at a crime scene, it allows us to capture good
documentation of the evidence in a nice portable unit (we do digital
photos and film through many of our other scopes). Our drug chemistry
unit uses microscopes to conduct crystal tests on some types of drugs,
as one of several tests run. The unit I work in if Firearm and Toolmark
analysis. We use stereo microscopes to examine bullets and cartridge
cases for class characteristics. We use that same scope to characterize
a defect in a garment as a bullet hole and to look for gun powder
particle around the bullet hole as part of a range determination. After
test firing a firearm we use a comparison microscope to compare the
known bullet or cartridge case to the unknown (bullet/cartridge case
form the scene) for both class and individual characteristics. We might
be the one examining the bullet for proof of ricochet in the SEM.
These are just a few examples of the many, many uses microscopes are put
to in a modern Forensic Science lab. I hope this gives you an idea of
what we do with microscopes related to physical evidence, if you have
other questions contact me off the list.

Jim

James L. Roberts
Firearm & Toolmark Examiner
Ventura Co. Sheriff's Lab
800 S. Victoria Ave.
Ventura, CA. 93009

(805) 477-1947

James.Roberts-at-ventura.org



} } } {jeremiah.tyler-at-us.army.mil} 10/17/2005 3:50:50 PM } } }



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America

Below is the result of your feedback form (NJZFM-ultra-55). It was
submitted by (jeremiah.tyler-at-us.army.mil) from
http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html

on Monday, October 17, 2005 at 16:16:22
---------------------------------------------------------------------------

Email: jeremiah.tyler-at-us.army.mil
Name: Jeremiah Tyler

Organization: Central Texas College

Education: Undergraduate College

Location: Panama City Beach, FL

Question: I am pursuing a degree in criminal investigation and as an
assignment I was to research the MSA website and submit my findings
to my fellow students in a discussion board. I understand microscopy
is a way of looking at items that are smaller than the eye can see
and to get a grasp on the application of microscopy in regards to CSI
is difficult for me since I am a visual person. What would be some
ways an investigator could utilize the services of a criminal
investigator?

---------------------------------------------------------------------------

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From: syli-at-northwestern.edu
Date: Mon, 17 Oct 2005 20:48:45 -0500
Subject: [Microscopy] re: viaWWW: online booking software

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

FYI,

Here is a software I designed for Northwestern University. It is ASP-based, like to forum I am
presenting the other day here (maybe I'd better not mention this: ).

Have a look: http://www.nuance.northwestern.edu/fom

Shuyou
_____________________________
Shu-You Li, Ph.D.
Electron Microscopist, EPIC
NUANCE
Northwestern University
2220 Campus Drive, 1161 Cook Hall (#2036 for mail)
Evanston, IL 60208-3108, USA
Ph: (847) 491-6723(O), (847) 491-7806(L), Fax: (847) 467-6573
Email: syli-at-northwestern.edu; shuyouli-at-gmail.com
http://www.nuance.northwestern.edu/EPIChttp://www.shuyouli.com



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From: W.Muss-at-salk.at
Date: Tue, 18 Oct 2005 04:11:28 -0500
Subject: [Microscopy] Re: Neutralizing Glutaraldehyde

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Good morning,
dear Garry,

You ask for deactivation of used } glutaraldehyde { solution.....

there are methods which work at least in a "microcosmic-microchemical"
environment (say cells, or fixation solutions used in tissue preparation
for microscopy....): they all use either } glycine { solution, also
} Na-borohydride { solutions can be used, and another alternative would be
} ammonium-chloride { (NH4Cl) (hydrous or in the respective buffer) which
is/has been used in immunohistochemistry (for a long while) for blocking
free aldehyde groups (resting from prior fixation process within the tissue
blocks).

For such a purpose, ROTH J et al in the 1980ies or 1990ies stated 50 mM
hydrous solution of Ammoniumchloride (30 min) would be sufficient to block
all free aldehyde groups in tissue blocks (the deactivation process takes -
merely seen chemically - just a few seconds, but to be on the safe side
for the deactivation of free aldehyde groups not bound to tissular elements
in tissue blocks they recommended incubation of tissues for at least 30
mins at room temperature).

Concerning the concentration of such deactivating solutions for higher
concentrated fixative solutions (say 2.5-4% GA) : perhaps / for sure
excess in concentration used routinely for "microchemical" reaction are
appropriate } usually { to be on the safe side.....

Since I have read some week ago that some commercially available
deactivators of formaldehyde solutions (available in the USA, perhaps
Canada too) like {Formalex} etc. are not suited for a deactivation of
Glutaraldehyde, I use another deactivation method I was told many years
ago,

namley highly alkalizing the (diluted) hydrous form- as well as
glutar-aldehyde solution(s) by adding enough 10 N NaoH solution (which is
also produced as a "waste" solution....after staining ultrathin sections
you would have to } dispose of { sodiumhydroxide pellets.....I collect them
into a bottle with water.....get nearly 5-10 N solution...and use it for
such deactivation processes...)
.....Unfortunately, I do not remember the source of that information as
well as the efficiacy of such a deactivation.....

Also there have been reported other chemical reagents used for blocking
aldehyde groups, namely sodium bisulfite as well as hydroxylamine (reagents
I don't have experience with).


But now I tried GOOGLE search for "aldehyde deactivation" and came over
some websites offering commercially available deactivation solutions, like:
PREMIDEX (C) ADS2: deactivates GA-solutions up to 4% concentration: comp.
http://www.metrex.com/products/unitedStates/premidexADS2/index.cfm
or: found at:
http://www.discount-office-supplies-resources.org/catalog1/Banta-Tissue-
Drape.html

Shilog Product Catalog Sorted by Category
(http://www.discount-office-supplies-resources.org/main.php?tracker=www.
shilog.com/Web_Site_Store/catagory.html )
Shilog Medical Supply. P.O. Box 1887. 3551 Mt. Moriah Road. McAlester. Ok,
74502. Toll Free: 1-800-574-4868. McAlester: 1-918-423-4447. Fax:
918-423-5569. E-Mail Us. Aldehyde Deactivation System (perhaps this also
points to PREMIDEX ADS2).

Also you can use the search phrase "aldehyde blocking" or "Formalin
deactivation"...you will find again some references....


Regards

Wolfgang Muss
Personal Communication Data:
OR Dr. Wolfgang Muss Member of MSA, etc, FRMS
Head of EM-Lab
Institute of Pathology, SALK
(Salzburger Landeskliniken gemeinnuetzige GesmbH)
Muellner Hauptstrasse 48
A-5020 SALZBURG AUSTRIA/EUROPE

and/or/alternatively

Paracelsus Medical Private University (PMU)
Institute of Pathology
Electron Microscopy Lab
Muellner Hauptstrasse 48
A-5020 SALZBURG, Austria/Europe
Phone work: +43+662+4482+4720
Mobile phone work:+43+662+4482-57704
Fax-No. at work: ++43+662+4482-882 ext (please, only by indicating: "c/o
W.Muss")
E-Mail work: W.Muss-at-SALK.at

Mobile-phone private: ++43+676+5 369-456
E-Mail private: wij.Muss-at-aon.at
------------------------------------------------------------------------
--------------------------------------
Ankuendigung namens der (Information on behalf of)
Society for Cutaneous Ultrastructure Research (SCUR)
PLEASE VISIT THE UPDATED WEBSITE of SCUR at
} http://www.scur.org {
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Forthcoming Meetings:
33rd Annual Meeting of the SCUR, 8th-10th June, 2006, WARSZAW, Poland
Preliminary informations: send an E-Mail
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35th Annual Meeting of the SCUR, 11th -12th May, 2008, NARA or KYOTO, Japan
Joint Meeting with the
JSUCB, the Japanese Society for Ultrastructural Cutaneous Biology


----------
Von: GBurgess-at-exchange.hsc.mb.ca[SMTP:GBurgess-at-exchange.hsc.mb.ca]
Antwort an: GBurgess-at-exchange.hsc.mb.ca
Gesendet: Montag, 17. Oktober 2005 23:02
An: W.Muss-at-salk.at
Betreff: [Microscopy] Neutralizing Glutaraldehyde




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I would be interested in what people use to neutralize their glutaraldehyde
for hazardous waste removal. This would be 2.5% buffered glut. as used to
fix human biopsy tissue.



Garry Burgess
Charge Technologist
Health Sciences Centre
Winnipeg

This e-mail and/or any documents in this transmission is intended for the
address(s) only and may contain legally privileged or confidential
information. Any unauthorized use, disclosure, distribution, copying or
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error, please notify the sender immediately and return the original.

==============================Original
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6, 20 -- From: Garry Burgess {GBurgess-at-exchange.hsc.mb.ca}
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From: ptomic-at-ciclonsemi.com
Date: Tue, 18 Oct 2005 07:45:37 -0500
Subject: [Microscopy] [Filtered] AskAMicroscopist: pursuing a degree in

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Jeremiah,

When going beyond the apparently visual aspects of crime scenes, the trace
evidence is where the microscopist would reside. For example, and these are
just some items that are employed in crime scene processing, this list is
not meant to be all inclusive.

1. Metals identification, e.g. plating from a bumper in a hit and run auto
accident - metal fragments from knives
2. Identification of paints
3. Gunshot residue using SEM-EDX
4. Hair and fiber identification
5. Tool mark identification [pipe bombs for example and product tampering]

Along with the above there are other disciplines such as entomology that can
analyze the type and progression of insects during the decomposition of the
body thus pinning time of death and in some cases place of death. I should
not leave out the most important which is DNA identification.

There is plenty of literature out there to help you.

A detective friend of mine told me that one can never enter and leave a
crime scene without leaving something behind or exchanging something. Just
think, you shed several million skin particles a day. One is bound to leave
a few at the scene among other things.

Good luck in your studies.

Peter Tomic
Ciclon Semiconductor Device Corp.
Bethlehem, PA



-----Original Message-----
X-from: jeremiah.tyler-at-us.army.mil [mailto:jeremiah.tyler-at-us.army.mil]
Sent: Monday, October 17, 2005 6:52 PM
To: ptomic-at-ciclonsemi.com

Below is the result of your feedback form (NJZFM-ultra-55). It was
submitted by (jeremiah.tyler-at-us.army.mil) from
http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html
on Monday, October 17, 2005 at 16:16:22
---------------------------------------------------------------------------

Email: jeremiah.tyler-at-us.army.mil
Name: Jeremiah Tyler

Organization: Central Texas College

Education: Undergraduate College

Location: Panama City Beach, FL

Question: I am pursuing a degree in criminal investigation and as an
assignment I was to research the MSA website and submit my findings
to my fellow students in a discussion board. I understand microscopy
is a way of looking at items that are smaller than the eye can see
and to get a grasp on the application of microscopy in regards to CSI
is difficult for me since I am a visual person. What would be some
ways an investigator could utilize the services of a criminal
investigator?

---------------------------------------------------------------------------

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From: William.H.Roberts-at-USA.dupont.com
Date: Tue, 18 Oct 2005 09:52:46 -0500
Subject: [Microscopy] Re: [Filtered] AskAMicroscopist: pursuing a degree in

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html





Jeremiah,

I was a forensic scientist for about nine years (back in the seventies) and
was the supervisor of the trace evidence section of the lab. I used a
variety of techniques including optical and scanning electron microscopy,
x-ray diffraction, gas chromatography/mass spec, and x-ray fluorescence in
addition to a number of physical test procedures. The key to working with
a trace evidence lab is maintaining flexibility. Present your evidence and
allow the analyst the opportunity to review it and suggest the appropriate
testing protocols. While there are some standard approaches to the
analysis of common evidence types such as paint, it pays to keep an open
mind with regards to what exactly constitutes evidence and how that
evidence might best be analyzed. The reason for this is that evidence
plays two roles in the investigation/prosecution of a case. The first use
of evidence is during the investigation phase of a case where the evidence
often plays a part in the identification of a suspect. Here the analyst
can often, though not always, be of significant help to the investigator by
revealing information gleaned from the evidence such as hair color, or the
color of a hit and run vehicle (maybe even the make and model in some
situations), shoe size and brand (and by extension an idea of the height
and weight of the suspect). The reason for keeping an open mind is that
some types of tests performed and the information which results may be
useful in identifying a suspect, but not in the second or prosecution phase
of a case. Here is where cases can be made or lost depending on the care
taken by the team of crime scene investigators and forensic scientists.
There are strict rules of evidence which are designed to protect the
innocent from either careless or willful tampering or contamination of the
evidence. When one is concerned with particles of matter which are
invisible until examined microscopically, there is a great risk of loss,
contamination, co-mingling, or misinterpretation of that evidence. Also,
the tests which are performed for the purpose of generating evidence to
which testimony will be given in court must meet certain standards
regarding admissability. Of course, the credentials of the analyst are
paramount, but the tests must be generally accepted in the scientific
community. Here, the use of the microscope is invaluable in that
microscopical techniques for hair and fiber, paint, soil, gunshot residue,
glass, tool marks, and firearm identification are well established and
generally accepted in court when performed by competent and ethical
analysts.

If you need more specific information on the nature of the evidence
examined or the types of tests which can be performed you can contact me
directlly at william.h.roberts-at-usa.dupont.com

Regards, Bill

jeremiah.tyler-at-us.army.mil wrote on 10/17/2005 06:48:19 PM:

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} Below is the result of your feedback form (NJZFM-ultra-55). It was
} submitted by (jeremiah.tyler-at-us.army.mil) from
} http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html
} on Monday, October 17, 2005 at 16:16:22
}
---------------------------------------------------------------------------
}
} Email: jeremiah.tyler-at-us.army.mil
} Name: Jeremiah Tyler
}
} Organization: Central Texas College
}
} Education: Undergraduate College
}
} Location: Panama City Beach, FL
}
} Question: I am pursuing a degree in criminal investigation and as an
} assignment I was to research the MSA website and submit my findings
} to my fellow students in a discussion board. I understand microscopy
} is a way of looking at items that are smaller than the eye can see
} and to get a grasp on the application of microscopy in regards to CSI
} is difficult for me since I am a visual person. What would be some
} ways an investigator could utilize the services of a criminal
} investigator?
}
}
---------------------------------------------------------------------------
}
} ==============================Original
Headers==============================
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From: herro001-at-umn.edu
Date: Tue, 18 Oct 2005 10:29:47 -0500
Subject: [Microscopy] Image storage?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

We have just started doing time lapse imaging of cells in culture.
As expected, the amount of data being produced is large. I expect to
produce about 200 GB every couple weeks (if I am careful). The files
are usually too large to be transfered to DVD (last night's
acquisitions totaled more than 30GB).

I am considering getting an external drive case (USB2 and/or 1394
(firewire)) and every couple of weeks swapping a new drive into this
case. The full drives would then go on a shelf for possible later
data retrieval. Right now 200 GB internal drives can be had for about
$70, so filling a couple dozen of these drives in a year would come
to about $2000.

What do the rest of you do to store this sort of data?


---

Michael J. Herron, U of MN, Dept. of Entomology
herro001-at-umn.edu
612-624-3688 (office) 612-625-5299 (FAX)



==============================Original Headers==============================
8, 15 -- From herro001-at-umn.edu Tue Oct 18 10:29:47 2005
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From: Elliott-at-arizona.edu
Date: Tue, 18 Oct 2005 10:59:47 -0500
Subject: [Microscopy] Re: Image storage?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I would not put too much faith in anything that spins. Drives fail.
If the data matters, I would think about something else.
Tape is a much better option. It is more stable and each tape is
cheeper. You may not pay for the increased cost of the tape drive with
the savings of tape vs. HD, but the data will be more secure.
I have set up an off site tape backup of my labs data (while I am at it
I also backup some of the departmental data). Each night the new data
is sucked off of the 1.5TB drive array that sits under my desk and is
put on tape. This involves very little work for me, and great data
safety. Even if the lab/building/university becomes a smoking whole in
the ground, the data is off site and safe.
You can always set up better systems with more money, mine is not the
best, but it did not cost much and I sleep better at night.
David


On Oct 18, 2005, at 8:32 AM, herro001-at-umn.edu wrote:

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}
} We have just started doing time lapse imaging of cells in culture.
} As expected, the amount of data being produced is large. I expect to
} produce about 200 GB every couple weeks (if I am careful). The files
} are usually too large to be transfered to DVD (last night's
} acquisitions totaled more than 30GB).
}
} I am considering getting an external drive case (USB2 and/or 1394
} (firewire)) and every couple of weeks swapping a new drive into this
} case. The full drives would then go on a shelf for possible later
} data retrieval. Right now 200 GB internal drives can be had for about
} $70, so filling a couple dozen of these drives in a year would come
} to about $2000.
}
} What do the rest of you do to store this sort of data?
}
}
} ---
}
} Michael J. Herron, U of MN, Dept. of Entomology
} herro001-at-umn.edu
} 612-624-3688 (office) 612-625-5299 (FAX)
}
}
}
} ==============================Original
} Headers==============================
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5, 22 -- Subject: Re: [Microscopy] Image storage?
5, 22 -- Date: Tue, 18 Oct 2005 08:59:43 -0700
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From: tivol-at-caltech.edu
Date: Tue, 18 Oct 2005 11:40:51 -0500
Subject: [Microscopy] Job Opportunity at The Aeropspace Corp

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear List,
A colleague asked me to post this job opening.
 

The Aerospace Corporation in El Segundo, CA has an opening for a Member
of the Technical Staff in the Microelectronics Technology Department.

JOB DUTIES:

Conduct basic and applied research using high resolution transmission
electron microscopy (HR TEM), electron energy loss spectroscopy (EELS),
electron diffraction, energy filtered imaging, electron tomography and
other advanced TEM techniques. The successful candidate will be
expected to develop innovative research programs involving the
application of the state-of-the-art TEM techniques to materials
research and microelectronic device analyses. Presentation of results
in scientific meetings and publication in refereed journals is
expected. The candidate will also be required to provide technical
support to various US Air Force space programs.
QUALIFICATIONS:

Ph.D. in physics, physical chemistry, materials science, electrical
engineering, or related technical discipline required. Experience in
characterizing materials and structures at the nanoscale is required.
A strong background in solid state and device physics is essential.
Ability to formulate and carry out independent research and targeted
investigations is a crucial requirement. Expertise required in one or
more of the following micro-analytical techniques: focused ion beam
techniques, high-resolution transmission electron microscopy, electron
energy-loss spectroscopy, or field-emission scanning electron
microscopy. Ph.D. and/or Postdoctoral research experience shall
include designing and conducting experimental studies, and performing
data analyses. Additional background or expertise in mathematical
analysis, device modeling and computer-based simulation is desirable.
Candidates must have good oral communication and technical writing
skills and the ability to work effectively as part of a team. US
citizenship required.


Location: The Aerospace Corporation is located in El Segundo, CA, a
beach community just outside of Los Angeles. Aerospace is 2 miles from
Los Angeles International Airport. Employees at Aerospace experience
the outstanding southern California climate, have access to year-round
beach activities and ski resorts open in the local mountains during a
substantial part of the year, as well as sporting and cultural
activities in the greater Los Angeles area.

For further information, please contact Martin S. Leung or Steven C.
Moss at

Martin S. Leung, Ph.D.
The Aerospace Corporation
P.O. Box 92957, MS/M2-244
Los Angeles, CA 90009-2957
Tel 310-336-7125
Email: martin.s.leung-at-aero.org

Steven C. Moss, Ph.D.
The Aerospace Corporation
P.O. Box 92957, MS/M2-244
Los Angeles, CA 90009-2957
Tel 310-336-9216
Email: steven.c.moss-at-aero.org


Yours,
Bill Tivol, PhD
EM Scientist and Manager
Cryo-Electron Microscopy Facility
Broad Center, Mail Code 114-96
California Institute of Technology
Pasadena CA 91125
(626) 395-8833
tivol-at-caltech.edu



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From: gary-at-gaugler.com
Date: Tue, 18 Oct 2005 11:55:08 -0500
Subject: [Microscopy] Re: Image storage?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

USB and Firewire drive controllers are somewhat flakey.
So are the drives. I had a Maxtor that died about 6
months after new. The current nod is to Western Digital.

The quality of hard drives varies every year from maker
to maker. One year one maker is tops, the next, down
at the bottom. So, choose wisely.

The other problem is that drives don't like being
turned on and off. For highest reliability, they should
be left on all the time until tracks or sectors start
to fail. When this happens, in a RAID system, the failing
drive is replaced and the good data is mirrored back over.
A single drive is a single point of failure.

A better option is to use tape. Best (IMO) is Ultrium 2 or 3.
Next option is DLT. Drives are pricey. Media costs about
$85 each. So once you get past the cost of the drive, the
media is about the same as the hard drive. If you are really
paranoid like me, I write two backup tape sets and store one
off-site. I use NovaNET backup software and it will back up
all PCs on my LAN. There is about 900GB of data stored.

gary g.




At 08:31 AM 10/18/2005, you wrote:


} We have just started doing time lapse imaging of cells in culture.
} As expected, the amount of data being produced is large. I expect to
} produce about 200 GB every couple weeks (if I am careful). The files
} are usually too large to be transfered to DVD (last night's
} acquisitions totaled more than 30GB).
}
} I am considering getting an external drive case (USB2 and/or 1394
} (firewire)) and every couple of weeks swapping a new drive into this
} case. The full drives would then go on a shelf for possible later
} data retrieval. Right now 200 GB internal drives can be had for about
} $70, so filling a couple dozen of these drives in a year would come
} to about $2000.
}
} What do the rest of you do to store this sort of data?
}
}
} ---
}
} Michael J. Herron, U of MN, Dept. of Entomology
} herro001-at-umn.edu
} 612-624-3688 (office) 612-625-5299 (FAX)


==============================Original Headers==============================
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From: dkinast-at-hitschfel.com
Date: Tue, 18 Oct 2005 14:08:00 -0500
Subject: [Microscopy] LM Job Opportunities

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html



Dear Fellow Listers,


Hitschfel Instruments, Incorporated is a consultative sales company,
providing microscope based imaging solutions to the biomedical research,
bio-industrial, clinical and educational communities throughout the states
of Missouri, Nebraska, Kansas, Oklahoma and Arkansas/Memphis plus central &
southern Illinois.

We are seeking two exceptional and highly motivated individuals to work with
us toward our mutual goals of success through customer satisfaction. The
successful candidates for these Technical Sales positions will represent the
Olympus microscope product line, as well as a variety of digital imaging
hardware/software systems and other ancillary products within either our
Kansas territory or our Arkansas/Memphis territory. These positions would
carry the responsibilities of all aspects of the sales process to include
initial contacts, consultative development of sales opportunities, product
demonstrations, equipment delivery/assembly/in-service and after sales
follow-up. You will also work in conjunction with our Imaging Technology
Specialist to assist in the process of selling the most complex Image
analysis and automated microscopy solutions.

The personal characteristics and qualifications that we are looking for are:

. A BS degree in the Life Sciences as a minimum
. Biomedical research lab experience highly preferred
. Microscopy and digital imaging skills highly preferred
. Excellent communication and interpersonal skills
. A high degree of self motivation and work ethic
. Computer skills, including software/hardware installation

Previous sales experience would also be preferred, but if you are the right
person for the job, we will teach you the selling skills that you will need
to be successful.

This is an excellent commissioned sales career opportunity! We offer a
competitive income potential, along with a liberal benefits package. If you
are thinking about an alternative career in science that will put your
knowledge of biomedical technology to use in the business world, please
forward your resume with a cover letter to me at: dkinast-at-hitschfel.com.


David L. Kinast
Sales Manager
Hitschfel Instruments, Inc.
2333 South Hanley Rd.
St. Louis, MO 63144
Phone:800/242-3501
Phone: 314/644-6660
Fax: 314/644-5877
dkinast-at-hitschfel.com
http://www.hitschfel.com
http://www.hitschfel.com/linecard.html
http://www.olympusmicroscopes.com


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13, 22 -- To: {Microscopy-at-microscopy.com}
13, 22 -- Cc: {ghitschfel-at-hitschfel.com}
13, 22 -- Subject: LM Job Opportunities
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From: keith.morris-at-ucl.ac.uk
Date: Wed, 19 Oct 2005 03:58:36 -0500
Subject: [Microscopy] Image storage?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Also have a look at hot swappable hard drive cages (see below).

X-from my personal experience of tape backup, not only is it very slow and
expensive, I have abandoned it due to reliability problems: the only two
times I really needed it the archived tapes were 'corrupted. I have since
given up with any form of file compression for the same reason.

In comparison we haven't had any hard drive fail on the 12 PC's we use for
imaging and they are all guaranteed for 5 years, and we have up to four hard
drives per PC - although upgrade the power supply [PSU] to 450w+ from the
paltry ones normally supplied. Being 'poor', I often use ebay for very cheap
processor upgrades to the max the motherboard can take and crucial.com for
more memory (although be warned Windows 98SE & ME OS can only handle 512Mb
max). I always avoid Fujitsu drives from experience, and I tend towards
Western Digital from habit, rather than performance, and as I'm used to
their website for utilities. External hard drives are also rather slow, even
with firewire and USB2, and I tend not to trust them. I only use them for
occasional transfer between PC's as they are much faster than the network.
The only problem we have is our older PC's have internal hard drive BIOS
limits e.g. 128Gb per hard drive, which can only be overcome by a tacky. I
tend to have S.M.A.R.T. on, which should help identify failing drives.

Hot swappable drive cages

The option I would have a look at is internal hot-swappable SATA hard drive
cages (or IDE depending on motherboards) as these are cheap and reliable per
Gb. I never use SCSI anymore as the cost of these is prohibitive per Gb and
they aren't even significantly faster anymore. You can be clever and use
raid etc.. but we don't, we just backup to a second media (normally optical
with data verification) as soon as the data is collected.

With hot swappable hard drive cages you simply pull out the hard drives and
replace them rather like floppy disks. Being hot swappable you can naturally
do this while the PC is running (they are designed for servers). But of
course you can do it while the system is off. e.g.
http://www.rackmount.com/Rackacc/HDC-300.htm

The OS remains on another internal drive.

That is a lot of data you are producing though, each of our OpenLabs or
confocal time-lapse systems produce far smaller total file sizes per week,
so DVD's and CD's are OK for us at the moment. User's here are responsible
for their own backup, although I provide more than adequate storage space
(300Gb+ per PC) and full back-up facilities for them - after all only they
know which images are important.

Regards

Keith




==============================Original Headers==============================
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From: Mike.Bode-at-soft-imaging.net
Date: Wed, 19 Oct 2005 10:11:26 -0500
Subject: [Microscopy] Image storage?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Well, it's all about how paranoid you want to be...

Here, we back up our data daily with an incremental backup, then do a full backup on a regular basis, and then we backup the backup to a different site. Just in case the building burns down....

Regarding disk drives and tapes: Perhaps you have been lucky, but the mean time between failures for hard disks is not infinite. It is not a quuestion of if, but rather when a hard disk will fail. And invariably they fail at the most inopportune moment. I had my hard disk crash on my laptop during M&M this year, so I had to do heart surgery on my laptop on the show floor and limp along for a week until I could get back to our network and get it back in full working condition. We use a RAID system here to store data, and we lose a disk once in a while. Because we are using RAID, it is not a big deal. Take out the old disk, plug in a new one, and have the system rebuild the information on the new disk.

If you use a tape for backup, it is a good idea to run a couple of tests before you put it away to make sure the tape is OK, and store it in a place where the data doesn't deteriorate (climate controlled, no strong magnetic fields).

Hot swappable drives are good, but not fail-safe, unless you use 2 copies. We use them here, too, and have not had any problems, but again, it's a normal disk drive and will fail eventually. By using multiple drives and rotating them, you can probably extend the mean time between failure to a timeframe that is long enough for you.

mike


Michael Bode, Ph.D.
Soft Imaging System Corp.
12596 West Bayaud Avenue
Suite 300
Lakewood, CO 80228
===================================
phone:  (888) FIND SIS
        (303) 234-9270
fax:    (303) 234-9271
email:  mailto:info-at-soft-imaging.com
web:    http://www.soft-imaging.com
===================================


-----Original Message-----
X-from: keith.morris-at-ucl.ac.uk [mailto:keith.morris-at-ucl.ac.uk]
Sent: Wednesday, October 19, 2005 3:03 AM
To: Mike Bode

Also have a look at hot swappable hard drive cages (see below).

X-from my personal experience of tape backup, not only is it very slow and expensive, I have abandoned it due to reliability problems: the only two times I really needed it the archived tapes were 'corrupted. I have since given up with any form of file compression for the same reason.

In comparison we haven't had any hard drive fail on the 12 PC's we use for imaging and they are all guaranteed for 5 years, and we have up to four hard drives per PC - although upgrade the power supply [PSU] to 450w+ from the paltry ones normally supplied. Being 'poor', I often use ebay for very cheap processor upgrades to the max the motherboard can take and crucial.com for more memory (although be warned Windows 98SE & ME OS can only handle 512Mb max). I always avoid Fujitsu drives from experience, and I tend towards Western Digital from habit, rather than performance, and as I'm used to their website for utilities. External hard drives are also rather slow, even with firewire and USB2, and I tend not to trust them. I only use them for occasional transfer between PC's as they are much faster than the network.
The only problem we have is our older PC's have internal hard drive BIOS limits e.g. 128Gb per hard drive, which can only be overcome by a tacky. I tend to have S.M.A.R.T. on, which should help identify failing drives.

Hot swappable drive cages

The option I would have a look at is internal hot-swappable SATA hard drive cages (or IDE depending on motherboards) as these are cheap and reliable per Gb. I never use SCSI anymore as the cost of these is prohibitive per Gb and they aren't even significantly faster anymore. You can be clever and use raid etc.. but we don't, we just backup to a second media (normally optical with data verification) as soon as the data is collected.

With hot swappable hard drive cages you simply pull out the hard drives and replace them rather like floppy disks. Being hot swappable you can naturally do this while the PC is running (they are designed for servers). But of course you can do it while the system is off. e.g.
http://www.rackmount.com/Rackacc/HDC-300.htm

The OS remains on another internal drive.

That is a lot of data you are producing though, each of our OpenLabs or confocal time-lapse systems produce far smaller total file sizes per week, so DVD's and CD's are OK for us at the moment. User's here are responsible for their own backup, although I provide more than adequate storage space (300Gb+ per PC) and full back-up facilities for them - after all only they know which images are important.

Regards

Keith




==============================Original Headers==============================
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==============================Original Headers==============================
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28, 24 -- Date: Wed, 19 Oct 2005 17:09:19 +0200
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From: john.mardinly-at-intel.com
Date: Wed, 19 Oct 2005 10:51:51 -0500
Subject: [Microscopy] Image storage?

Contents Retrieved from Microscopy Listserver Archives
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We are using a LaCie Biggest Disk array. It has four 250GB hard drives
in a raid 5 configuration (Raid 0 and 1 are options) netting 750GB. It
has a Firewire 800 and USB 2.0 interface so installation is trivial. The
only problem we have seen is that the Firewire is quite slow on our old
computer that also runs the Gatan camera and GIF. It is fast on USB 2.0
on another computer. Vendor support did not go to help debug the
computer, since the drive seemed to be working. There is more on:
http://www.lacie.com/products/
On this system, if one spindle fails, the data can be recovered since it
is redundant on the other spindles. Tape is theoretically good too, but
don't be overconfident that you can restore from a tape that has been
sitting on a shelf for a few years.

John Mardinly
Intel Corporation

The opinions of this author do not necessarily reflect the opinons of
Intel Corporation.

-----Original Message-----
X-from: herro001-at-umn.edu [mailto:herro001-at-umn.edu]
Sent: Tuesday, October 18, 2005 8:30 AM
To: Mardinly, John

We have just started doing time lapse imaging of cells in culture.
As expected, the amount of data being produced is large. I expect to
produce about 200 GB every couple weeks (if I am careful). The files
are usually too large to be transfered to DVD (last night's
acquisitions totaled more than 30GB).

I am considering getting an external drive case (USB2 and/or 1394
(firewire)) and every couple of weeks swapping a new drive into this
case. The full drives would then go on a shelf for possible later
data retrieval. Right now 200 GB internal drives can be had for about
$70, so filling a couple dozen of these drives in a year would come
to about $2000.

What do the rest of you do to store this sort of data?


---

Michael J. Herron, U of MN, Dept. of Entomology
herro001-at-umn.edu
612-624-3688 (office) 612-625-5299 (FAX)



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From: jquinn-at-www.matscieng.sunysb.edu
Date: Wed, 19 Oct 2005 11:24:15 -0500
Subject: [Microscopy] thread size on B&L SZ4

Contents Retrieved from Microscopy Listserver Archives
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Folks

Off hand, does anyone know the
thread size on a Bausch&Lomb (B&L)
StereoZoom 4 (SZ4) nose/objective?

Any vendors wanting to sell me
filters, doublers, etc.... are
welcome to contact me off-list.

It looks be be around 1-1/2"x30.

regards,

Jim





==============================Original Headers==============================
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11, 12 -- Date: Wed, 19 Oct 2005 12:19:33 -0400
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From: richard.beanland-at-bookham.com
Date: Thu, 20 Oct 2005 10:58:52 -0500
Subject: [Microscopy] Micrion Service Manual needed

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Listers,
does anyone have a copy of the Micrion focused ion beam microscope service manual, part number 800 000033, "Service Procedures 2000 Manual" which they would be willing to copy (or lend to me so I can copy and return)? I'm happy to pay any costs involved.
I have tried via FEI but they are unable to help me, so I figure the listserver is my best hope.

Many thanks

Richard

________________________________________
Richard Beanland
Analytical Services
Bookham Inc
Caswell
Towcester
Northants
NN12 8EQ
United Kingdom
Tel. +44 1327 356362
Fax. +44 1327 356775
http://www.bookham.com
________________________________________


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From: emlabservices-at-cox.net
Date: Thu, 20 Oct 2005 15:26:17 -0500
Subject: [Microscopy] TEM -- JEOL JEM-100C Free

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hello all,

We have a JEOL Model JEM-100C TEM that is to be deinstalled next week. It
is presently located in south Texas. If there is any interest in acquiring
this instrument please contact me off line asap.

Bob Roberts
EM Lab Services, Inc.
449 NW 62nd St.
Topeka, Kansas 66617-1780
785.246.1232 voice
785.246.0168 fax
www.emlabservices.com



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From: Stacey.Andringa-at-uc.edu
Date: Thu, 20 Oct 2005 17:29:03 -0500
Subject: [Microscopy] viaWWW: digitizing tablet and mouse

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (Stacey.Andringa-at-uc.edu) from http://www.microscopy.com/MLFormMail.html on Thursday, October 20, 2005 at 08:37:17
---------------------------------------------------------------------------

Email: Stacey.Andringa-at-uc.edu
Name: Stacey Andringa

Organization: University of Cincinnati

Title-Subject: [Filtered] MListserver:

Question: Does anyone have an old working digitizing tablet and mouse that needs a good home? Our old tablet reached "end of life" nine years ago, but just now died.
We are on a tight budget and have been looking for a used one.
Thanks in advance for any help.

Stacey Andringa

---------------------------------------------------------------------------

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From: mbisher-at-princeton.edu
Date: Thu, 20 Oct 2005 17:29:25 -0500
Subject: [Microscopy] viaWWW: staining information for the polymer particles

Contents Retrieved from Microscopy Listserver Archives
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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (mbisher-at-princeton.edu) from http://www.microscopy.org/MicroscopyListserver/MLFormMail.html on Thursday, October 20, 2005 at 08:54:15
---------------------------------------------------------------------------

Email: mbisher-at-princeton.edu
Name: Margaret Bisher

Organization: Princeton University

Title-Subject: [Filtered] MListserver:

Question: Here we are looking for staining information for the polymer particles we
would like to look at under TEM. The polymer particles are dispersed on the
TEM grid coated with holy carbon film. The particles are composed of Poly
(Ethylene glycol) PEG) + b-Poly(carprolactone)(PCL) (5k-7k). The average
diameter of particles is about 200nm. The diameter of the core of the
particles (PEG) is about 140nm, and the polymer brush(PCL)outside core is
about 30nm long.

---------------------------------------------------------------------------

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From: jae5-at-lehigh.edu
Date: Fri, 21 Oct 2005 07:43:57 -0500
Subject: [Microscopy] Vacancy for a post doc

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Michael,

Yes external Hard drive cages do exist, but if you are going 'external' a
few 300Gb+ Lacie or Maxtor/WesternDigital Firewire/USB2 drives may be easier
and probably cheaper (and they are fairly 'hot swappable' as well by simply
unplugging the USB2/Firewire lead).

Have a look at the £230 LaCie 500GB Big Disk Extreme FW400/800 USB2 7200rpm
16MB cache or the £500 LaCie 1000GB Bigger Disk Extreme 7200rpm Fast
Firewire (seems to have been discountinued).

There is also the Lacie two Terabyte fully hot swappable F800 HD 'cartridge'
system, if you must, but then you are going over £1,500 for the total
convenience of hot-swappable drives (with the USB2 still plugged in). LaCie
offers a spare drives and drawers (just like the internal cages) for use
with the LaCie Biggest F800. You can immediately and easily hot-swap a
failed drive etc. These Lacie products are faster than most if not all other
USB/Firewire external units, and are highly regarded.

See it all at:
http://www.lacie.com/products/range.htm?id=10033

The large number of hard drives enclosed in the Lacie non 'hot-swappable' HD
units makes them trans-staggerable rather than portable though.

External Ultra-SCSI HD cages would also be ideal, fed via a SCSI out PCI
card, but the price of SCSI drives is totally prohibitive per Gb.

With regard to internal PC heat, our PC's have extra fans in cabinets
(although they aren't very effective), but being mostly fairly elderly the
CPU's don't generate the heat of latest PC's. Upgrading the power supply
(PSU) is a big improvement as these also have temperature control and
superior extraction fans (and most case's heat-flow are designed to have
heat exit this way). I regularly remove dust bunnies from inside the PC's as
well and the PC's are kept on benches rather than the floor to reduce dust
contamination (dust insulation causes temperature build-up). An air-jet plus
Hoover works fine (but avoid Hoovering electronics directly to prevent
static build up).

Regards

Keith

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk



----- Original Message -----
X-from: "Michael Herron" {herro001-at-umn.edu}
To: {keith.morris-at-ucl.ac.uk}
Sent: Wednesday, October 19, 2005 11:24 PM

Electron Backscattering Diffraction
in the
Scanning Electron Microscope

Immediate vacancy for a post doc.


My post doc is leaving me to go to a great job with General Electric, so
I have a year and a half of funding with no one to do the work. I am
looking for a post doc, starting immediately (or as soon as is
practical) and ending May 31, 2007.

This is a DOE-funded project entitled: Strain Measurement in Thin Films.
The main focus of the work is developing and extending the technique
of EBSD in the SEM. The work involves EBSD, energy-filtered EBSD, and
writing new procedures for analyzing data. A new SEM that will be
chosen to give optimum EBSD performance will be ordered before the end
of the year to supplement the already very strong set of instruments
available at Lehigh for this work. You can get some idea of what is
wanted from looking at previous work from this group:
Microscopy and Microanalysis 11 (2005) 341-353
Microscopy and Microanalysis 11 Supplement 2 (2005) 524-525

The ideal candidate will have prior experience of three kinds:
experimental electron microscopy, dynamical diffraction theory and
programming.

The next steps are a) to further the use of EBSD to measure strain and
to apply it to electromigration, b) to develop better spatial resolution
in EBSD through energy filtering and c) to write software to simulate
EBSD patterns.

Candidates interested in this post please contact me. If you have sent
me email enquiring about a job and have got a reply saying I have no
vacancies (which was true at the time), please feel free to send your
details again - I have deleted the information you sent previously.

Alwyn Eades

--
...........
Alwyn Eades
Department of Materials Science and Engineering
Lehigh University
5 East Packer Avenue
Bethlehem
Pennsylvania 18015-3195
Phone 610 758 4231
Fax 610 758 4244
jae5-at-lehigh.edu


==============================Original Headers==============================
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From: familia_zepeda-at-yahoo.com
Date: Fri, 21 Oct 2005 08:02:05 -0500
Subject: [Microscopy] AskAMicroscopist:inventor of polorizing microscope

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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (familia_zepeda-at-yahoo.com) from http://www.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Thursday, October 20, 2005 at 22:15:54
---------------------------------------------------------------------------

Email: familia_zepeda-at-yahoo.com
Name: Irene Zepeda

Organization: Canyon Springs High school

Education: 9-12th Grade High School

Location: North Las Vegas, Nevada 89030

Question: I am doing a research project on William Nichol who invented the polorizing microscope, but i cant seem to find any biographical information on him is there anyway you can help me?

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From: W.Muss-at-salk.at
Date: Fri, 21 Oct 2005 08:17:41 -0500
Subject: [Microscopy] AskAMicroscopist: Re: inventor of polorizing microscope

Contents Retrieved from Microscopy Listserver Archives
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Dear Irene,
good morning !

Try the correct name of the guy, which in fact is } NICOL {,
Search for "Nicol William" or, perhaps better, Nicol prism....you will get
some results.....
eg. on WIKIPEDIA
http://en.wikipedia.org/wiki/Nicol_prism

==} }
"......It was invented in 1828 by William Nicol (1768-1851) of
Edinburgh...." etc..

Best regards

Wolfgang Muss


Personal Communication Data:
OR Dr. Wolfgang Muss Member of
EM-Lab
Institute of Pathology, SALK
(Salzburger Landeskliniken gemeinnuetzige GesmbH)
Muellner Hauptstrasse 48
A-5020 SALZBURG AUSTRIA/EUROPE

and/or/alternatively

Paracelsus Medical Private University (PMU)
Institute of Pathology
Electron Microscopy Lab
Muellner Hauptstrasse 48
A-5020 SALZBURG, Austria/Europe
Phone work: +43+662+4482+4720
Mobile phone work:+43+662+4482-57704
Fax-No. at work: ++43+662+4482-882 ext (please, only by indicating: "c/o
W.Muss")
E-Mail work: W.Muss-at-SALK.at

Mobile-phone private: ++43+676+5 369-456
E-Mail private: wij.Muss-at-aon.at


----------
Von: familia_zepeda-at-yahoo.com[SMTP:familia_zepeda-at-yahoo.com]
Antwort an: familia_zepeda-at-yahoo.com
Gesendet: Freitag, 21. Oktober 2005 15:05
An: W.Muss-at-salk.at
Betreff: [Microscopy] AskAMicrosc: inventor of polarizing microscope




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Below is the result of your feedback form (NJZFM-ultra-55). It was
submitted by (familia_zepeda-at-yahoo.com) from
http://www.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on
Thursday, October 20, 2005 at 22:15:54
---------------------------------------------------------------------------

Email: familia_zepeda-at-yahoo.com
Name: Irene Zepeda

Organization: Canyon Springs High school

Education: 9-12th Grade High School

Location: North Las Vegas, Nevada 89030

Question: I am doing a research project on William Nichol who invented the
polarizing microscope, but i cant seem to find any biographical information
on him is there anyway you can help me?

---------------------------------------------------------------------------

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26, 28 -- From W.Muss-at-salk.at Fri Oct 21 08:17:41 2005
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From: baskin-at-bio.umass.edu
Date: Fri, 21 Oct 2005 11:35:32 -0500
Subject: [Microscopy] Re: AskAMicroscopist:inventor of polorizing

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Irene,

William Nicol invented the 'Nicol prism' in 1828. This polarizer prism is "a
rhombohedren of calcite, cut diagonally, ground and polished and cemented
together with Canada balsam". However not many living microscopists will
have ever used one, as Edwin Land subsequently invented 'Polaroid' plastic
sheet in 1932 and this is now always used in place of the Nicol prism as the
polarizer/analyser.

Regards

Keith

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk
----- Original Message -----
X-from: {familia_zepeda-at-yahoo.com}
To: {keith.morris-at-ucl.ac.uk}
Sent: Friday, October 21, 2005 2:05 PM





Hey...Watch it.

My first pol scope had nicol polarized and cap analyzer. I'm still using
that scope as the balsam hasn't separated. Oh, yes it has a mirror and I
use a focusable lamp. I used to do dispersion staining for asbestos and
microchemical test with that scope... Boy, thinking of it bring back
memories....

Frank Karl
Degussa Corporation
Akron Technical Center
3500 Embassy Parkway
Suite 100
Akron, Ohio 44333


330-668-2235 Ext. 238


This e-mail transmission, and any documents, files or previous e-mail
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keith.morris-at-ucl.
ac.uk To: frank.karl-at-degussa.com
cc:
10/21/2005 10:08 Subject: [Microscopy] Re: AskAMicroscopist:inventor of polorizing microscope
AM
Please respond to
keith.morris








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The Microscopy ListServer -- CoSponsor: The Microscopy Society of America


Dear Irene,

William Nicol invented the 'Nicol prism' in 1828. This polarizer prism is
"a
rhombohedren of calcite, cut diagonally, ground and polished and cemented
together with Canada balsam". However not many living microscopists will
have ever used one, as Edwin Land subsequently invented 'Polaroid' plastic
sheet in 1932 and this is now always used in place of the Nicol prism as
the
polarizer/analyser.

Regards

Keith

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk
----- Original Message -----
X-from: {familia_zepeda-at-yahoo.com}
To: {keith.morris-at-ucl.ac.uk}
Sent: Friday, October 21, 2005 2:05 PM

Greetings,
I think that the Nicol type prism provides high quality
extinction, better than the Land type. I expect there have been
modern refinements to the design since Nicol but a pair of cemented
appropriately cut crystals provide excellent extinction. I believe
they are common on optical benches in physics applications -- it can
be awkward working the prisms into a microscope light path.

As ever,
Tobias

}
}
}
} Hey...Watch it.
}
} My first pol scope had nicol polarized and cap analyzer. I'm still using
} that scope as the balsam hasn't separated. Oh, yes it has a mirror and I
} use a focusable lamp. I used to do dispersion staining for asbestos and
} microchemical test with that scope... Boy, thinking of it bring back
} memories....
}
} Frank Karl
} Degussa Corporation
} Akron Technical Center
} 3500 Embassy Parkway
} Suite 100
} Akron, Ohio 44333
}
} 330-668-2235 Ext. 238
}
}
}
}
}
} keith.morris-at-ucl.
} ac.uk To:
} frank.karl-at-degussa.com
}
} cc:
} 10/21/2005 10:08 Subject:
} [Microscopy] Re: AskAMicroscopist:inventor of polorizing
} microscope
}
} AM
} Please respond
} to
} keith.morris
}
}
}
}
}
} Dear Irene,
}
} William Nicol invented the 'Nicol prism' in 1828. This polarizer prism is
} "a
} rhombohedren of calcite, cut diagonally, ground and polished and cemented
} together with Canada balsam". However not many living microscopists will
} have ever used one, as Edwin Land subsequently invented 'Polaroid' plastic
} sheet in 1932 and this is now always used in place of the Nicol prism as
} the
} polarizer/analyser.
}
} Regards
}
} Keith
}
} ----------------------------------------------------------
} Dr Keith J Morris
} Imaging Facilities Manager
} Cell Biology Division
} Institute of Ophthalmology
} University College London
} 11-43 Bath Street
} London EC1V 9EL
}
}

--
_ ____ __ ____
/ \ / / \ / \ \ Tobias I. Baskin
/ / / / \ \ \ Biology Department
/_ / __ /__ \ \ \__ 611 N. Pleasant St.
/ / / \ \ \ University of Massachusetts
/ / / \ \ \ Amherst, MA, 01003
/ / ___ / \ \__/ \ ____
http://www.bio.umass.edu/biology/baskin/
Voice: 413 - 545 - 1533 Fax: 413 - 545 - 3243

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From: neuberger1234-at-comcast.net
Date: Fri, 21 Oct 2005 12:28:25 -0500
Subject: [Microscopy] AskAMicroscopist:inventor of polorizing

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Another problem with the plastic polarizing filters is that they fade
quickly or melt outright under intense light sources, e.g. a Xenon lamp. I
wonder if the cement used in the cut crystal prisms would also experience a
problem with high light intensity. BTW, I found that heat filters did not
sufficiently help; neutral density filters did help but those defeated the
purpose of the high intensity lamp we were trying to use.

Damian Neuberger, Ph.D.
Consultant
Microscopy/Digital Imaging/Image Analysis
2416 Covert Rd
Glenview IL 60025
Tel: (847) 998-8574
email: neuberger1234-at-comcast.net {mailto:neuberger1234-at-comcast.net}


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The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

Greetings,
I think that the Nicol type prism provides high quality
extinction, better than the Land type. I expect there have been
modern refinements to the design since Nicol but a pair of cemented
appropriately cut crystals provide excellent extinction. I believe
they are common on optical benches in physics applications -- it can
be awkward working the prisms into a microscope light path.

As ever,
Tobias




==============================Original Headers==============================
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From: woad-at-iinet.net.au
Date: Fri, 21 Oct 2005 17:25:16 -0500
Subject: [Microscopy] viaWWW: 3d phase contrast light microscopy

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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (woad-at-iinet.net.au) from http://www.microscopy.org/MicroscopyListserver/MLFormMail.html on Friday, October 21, 2005 at 12:16:15
---------------------------------------------------------------------------

Email: woad-at-iinet.net.au
Name: Francois Burton-Bradley

Organization: Newcastle University

Title-Subject: [Filtered] 3d phase contrast light microscopy

Question: I remember running across a particular university group that had at one stage been working on generating 3d image from phase contrast LM images. However I can't find the link as I've forgotten it...does anybody know of any people/links/papers doing work in this area?

thanks

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From: mierzwa-at-jeol.com
Date: Fri, 21 Oct 2005 17:38:58 -0500
Subject: [Microscopy] MMMS workshop- Analytical Techniques in EM

Contents Retrieved from Microscopy Listserver Archives
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MMMS WORKSHOP - Analytical Techniques in EM

Presented by:
Midwest Microscopy and Microanalysis Society (MMMS)
Affiliate of the Microscopy Society of America and the Microbeam Analysis Society of America

November 18th, 2005
8:00AM - 4:45PM
Baxter Corporate Headquarters
Deerfield, IL


Registration Fees:
MMMS members: - $ 30.00
Non-members: - $40.00 (MMMS membership is included in fee)
MMMS students members: $15.00
Non-member students: $ 20.00 (MMMS membership is included in fee)

Vendors: We welcome vendors, tables for literature and exhibits are available. Contact us for details.

8:00AM - 8:30AM Setup and registration

8:45AM - 9:30AM Automatic Chemical Classification of Phases of Interest in the EM - John Friel, Princeton Gama Tech.
9:30AM - 10:15AM Factors Affecting Light Element Analysis - Neil Rowlands, Oxford Instruments NanoAnalysis

10:15 - 10:45 Break

10:45 AM - 11:30AM Parallel Beam Optics an Evaluation of Current Performance - Del Redfern, Edax, Inc.
11:30AM - 12:15PM Ultra high-energy-resolution Soft X-ray Emission Spectroscopy: seeing what EELS does not see. Yasuo Ito, Northern Illinois University

12:15PM - 1:15PM LUNCH - Included

1:15PM - 2:00PM Spectral and Spatial Analyses of Spectral Imaging Data Sets - Dr. Patrick Camus, Themo Electron Corporation
2:00PM - 2:45PM Electrical and refractory properties of nanowires measured by TEM - Oleg Lourie, Gatan, Inc.

2:45PM - 3:15PM Break

3:15PM - 4:00PM QuantomiX WETSEM Technology - Daphna Yaniv, QuantomiX
4:00PM - 4:45PM

RSVP is Requested by NOV 4th
Please send RSVP via email or phone to:


Robert Mierzwa
MMMS Past President
TEL (920) 803-8945
mierzwa-at-jeol.com



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From: wpchan-at-u.washington.edu
Date: Mon, 24 Oct 2005 01:43:26 -0500
Subject: [Microscopy] replies to Re: CPD

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Couple weeks ago, I posted a question on whether it is necessary to have
enough (or any) ethanol to cover the sample in the CPD chamber at the
beginning of CPD. I received many replies and are grateful for the
advice. Here is a summary of the replies.

1. Filling the CPD chamber with ethanol is not necessary. In some cases,
there are enough ethanol in the CPD chamber and the specimen basket that
evaporation is minimal, if any. Some preparations are more tolerant to
this condition.

2. Filling the CPD chamber with ethanol is essential. The majority of the
replies recommends never letting the preparation exposed to air during
dehydration to avoid uneven evaporation, which will defeat the purpose of
doing CPD. Delicate specimens can probably benefit from a more cautious
approach.

3. One reply suggest using amyl acetate as the intermediate fluid after
ethanol dehydration, but I don't think I will use that because the need of
access to a fume hood. So far, ethanol and CO2 alone has given us good
results. At least for those preps that we were able to compare to live
specimens.

I will continue to suggest to users of our facility to be aware of the
condition mentioned in #2 above and hopefully the user will adopt the
appropriate practice. For my own preps, I will definitely go with #2.
Thanks again for sharing your expertise. Cheers.

--
Pang (Wai Pang Chan, wpchan-at-u.washington.edu)

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From: William.H.Roberts-at-USA.dupont.com
Date: Mon, 24 Oct 2005 11:15:36 -0500
Subject: [Microscopy] ReindeerGraphics.com

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Dear Listers,

I cannot access ReindeerGraphics.com this morning (publishers of Fovea Pro
image analysis plugin suite for Photoshop). Does anyone have information
as to the status of the web site? Perhaps someone has an 800 or other
area code number for their offices? Any help appreciated.

Thanks, Bill

This communication is for use by the intended recipient and contains
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From: William.H.Roberts-at-USA.dupont.com
Date: Mon, 24 Oct 2005 11:44:41 -0500
Subject: [Microscopy] Fw: ReindeerGraphics.com

Contents Retrieved from Microscopy Listserver Archives
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----- Forwarded by William H Roberts/US/FILM/DPT on 10/24/05 12:41 PM -----

Brent Neal
{fbneal-at-mac.com}
To
10/24/05 12:38 PM William H Roberts/US/FILM/DPT-at-DPT
cc

Subject
Re: [Microscopy]
ReindeerGraphics.com










(10/24/05 11:18) William.H.Roberts-at-USA.dupont.com
{William.H.Roberts-at-USA.dupont.com} wrote:

} Dear Listers,
}
} I cannot access ReindeerGraphics.com this morning (publishers of Fovea Pro
} image analysis plugin suite for Photoshop). Does anyone have information
} as to the status of the web site? Perhaps someone has an 800 or other
} area code number for their offices? Any help appreciated.
}
} Thanks, Bill


You can reach the Reindeer Graphics offices at 919.342.0209. RGI's website
is hosted in Boca Raton, FL, which probably gives you some hint as to why
its not up right now.

B


P.S. Please forward this to the Microscopy list - I can't seem to send to
them right now. Thanks!
--
Brent Neal
Geek of all Trades
"Specialization is for insects" -- Robert A. Heinlein
http://brentn.freeshell.org

This communication is for use by the intended recipient and contains
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return e-mail and delete this e-mail from your system. Unless explicitly
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not constitute a contract offer, a contract amendment, or an acceptance
of a contract offer. This e-mail does not constitute a consent to the
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transfers of data to third parties.

Francais Deutsch Italiano Espanol Portugues Japanese Chinese Korean

http://www.DuPont.com/corp/email_disclaimer.html

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From: neuberger1234-at-comcast.net
Date: Mon, 24 Oct 2005 11:57:07 -0500
Subject: [Microscopy] Fw: ReindeerGraphics.com

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Forwarded per request.

Damian Neuberger

(10/24/05 11:18) William.H.Roberts-at-USA.dupont.com
{William.H.Roberts-at-USA.dupont.com} wrote:

} Dear Listers,
}
} I cannot access ReindeerGraphics.com this morning (publishers of Fovea Pro
} image analysis plugin suite for Photoshop). Does anyone have information
} as to the status of the web site? Perhaps someone has an 800 or other
} area code number for their offices? Any help appreciated.
}
} Thanks, Bill


You can reach the Reindeer Graphics offices at 919.342.0209. RGI's website
is hosted in Boca Raton, FL, which probably gives you some hint as to why
its not up right now.

B


P.S. Please forward this to the Microscopy list - I can't seem to send to
them right now. Thanks!
--
Brent Neal
Geek of all Trades
"Specialization is for insects" -- Robert A. Heinlein
http://brentn.freeshell.org



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From: opmills-at-mtu.edu
Date: Mon, 24 Oct 2005 15:01:56 -0500
Subject: [Microscopy] TEM preparation of zooplankton

Contents Retrieved from Microscopy Listserver Archives
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Hi,

Can any of you provide me a reference or procedure for preparing
zooplankton for TEM + microanalysis?

Thanks!

Owen
Owen P. Mills
Michigan Technological University
Rm 512 M&M Bldg.
Houghton, MI 49931
PH 906-369-1875
FAX 906-487-2934
mailto:opmills-at-mtu.edu
http://www.mm.mtu.edu/~opmills




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7, 31 -- From: "Owen P. Mills" {opmills-at-mtu.edu}
7, 31 -- Subject: [MICROSCOPY]TEM preparation of zooplankton
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From: oshel1pe-at-cmich.edu
Date: Mon, 24 Oct 2005 15:16:28 -0500
Subject: [Microscopy] RE: TEM preparation of zooplankton

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Owen,

Look up the UNESCO guides on oceanographic methodology. They have one specifically on zooplankton fixation and preservation.
Also, I have this and another guide or two at home, still in boxes. I'll try to remember to bring them in so I can the references.
But ... what are you trying to fix and to analyze? If labile ions like Na, K, Ca and the like, you really need to use cryomethods for microanalysis. If the elements you're after are not labile, then standard Karnovsky's and so on may work.

Phil

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859
(989) 774-3576

----------

Hi,

Can any of you provide me a reference or procedure for preparing
zooplankton for TEM + microanalysis?

Thanks!

Owen
Owen P. Mills
Michigan Technological University
Rm 512 M&M Bldg.
Houghton, MI 49931
PH 906-369-1875
FAX 906-487-2934
mailto:opmills-at-mtu.edu
http://www.mm.mtu.edu/~opmills




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7, 31 -- Subject: [MICROSCOPY]TEM preparation of zooplankton
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From: eeloe-at-ucsd.edu
Date: Mon, 24 Oct 2005 18:15:17 -0500
Subject: [Microscopy] AskAMicroscopist: Vibrio parahaemolyticus samples for SEM

Contents Retrieved from Microscopy Listserver Archives
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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (eeloe-at-ucsd.edu) from http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Monday, October 24, 2005 at 17:34:46
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Email: eeloe-at-ucsd.edu
Name: Emiley Eloe

Organization: Scripps Institution of Oceanography

Education: Graduate College

Location: La Jolla, CA USA

Question: I'm trying to prepare Vibrio parahaemolyticus samples for SEM on 2216-marine agar plates and am having difficulties visualizing the bacterial cells on the agar surface. I have used a 1% glut/0.1M cacodylic acid plus 3.5% salt fixative and fixed cells by gently pouring over the agar plate. It appears as though cells are somehow diffusing or migrating into the agar and avoiding being fixed directly on the surface. Any help would be appreciated.

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From: oshel1pe-at-cmich.edu
Date: Tue, 25 Oct 2005 07:27:37 -0500
Subject: [Microscopy] AskAMicroscopist: Vibrio parahaemolyticus samples for SEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Carefully cut out 1 millimeter X ~10 mm X ~1 mm pieces of the agar where the bacteria are. Fix for a couple of hours at room temperature (or overnight in the 'frig) and dehydrate as usual. After the final 100% EtOH step, drop the pieces into liquid nitrogen. The EtOH freezes vitreously, and so won't cause any freezing artifacts. If the pieces don't spontaneously fall apart, break them with a razor blade. This will expose the bacteria in the agar. (This method also works for all sorts of things.) Return to 100% EtOH, then critical-point dry.

Phil

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859
(989) 774-3576



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To: Oshel, Philip Eugene

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (eeloe-at-ucsd.edu) from http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Monday, October 24, 2005 at 17:34:46
---------------------------------------------------------------------------

Email: eeloe-at-ucsd.edu
Name: Emiley Eloe

Organization: Scripps Institution of Oceanography

Education: Graduate College

Location: La Jolla, CA USA

Question: I'm trying to prepare Vibrio parahaemolyticus samples for SEM on 2216-marine agar plates and am having difficulties visualizing the bacterial cells on the agar surface. I have used a 1% glut/0.1M cacodylic acid plus 3.5% salt fixative and fixed cells by gently pouring over the agar plate. It appears as though cells are somehow diffusing or migrating into the agar and avoiding being fixed directly on the surface. Any help would be appreciated.


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From: mjo10-at-psu.edu
Date: Tue, 25 Oct 2005 15:03:02 -0500
Subject: [Microscopy] Preparing Porous Sintered TEM Samples

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

A couple of months back I asked the listserver about preparing porous
samples for TEM, and the advice I received worked quite well. For
sake of the archival information, I wanted to comment on what
suggestions were made, which were applied and the results of the
work. This may be common knowledge for some, but it may be of some
assistance to others in the future. Any suggestions or comments are
also welcomed such that they will be included in the thread for
future searches.

Preparing TEM samples from sintered powders of metals or oxides
Problem:
Due to the large amount of porosity in certain sintered powder
samples, polishing or dimpling to a thickness of 10-15 um is
difficult because the sample has very little mechanical strength and
is susceptible to crack formation even at small forces.

Proposed Solutions:
Infiltrate with crazy glue or sulfur to fill in the porosity, thereby
making the sample more homogeneous. The rigidity of the infiltrated
media will assist in reducing the cracks formed within the sample
during polishing or dimpling.

Steps Taken:
Samples were polished down to 75-100 um and then placed in pure
acetone to remove any crystal bond from the pores. While crystal
bond did partially fill in the pores, it was not rigid enough to keep
the sample intact at final polishing steps. The samples may need to
be polished down farther before they are infiltrated with crazy glue
depending on the extent of the porosity. Typically though, if the
crazy glue does not fully penetrate the sample at 75-100 um, then the
sample is probably compact enough to polish to 10-15 um without infiltration.

Once removed from acetone, drops of crazy glue (store bought) were
placed on the sample until it appeared that it had stopped absorbing
the glue. The sample was then drawn across a piece of wax paper
until the bottom of the sample did not stick to the wax paper. This
was done to ensure that the sample remains flat so that when it is
remounted it is not uneven. The sample was then left to cure for the
recommended time and temperature for crazy glue (denoted on package).

A second, more ingenious, method was developed by a co-worker with
similar issues in that he cut a plastic capsule to the shape of a
small tube and stuck it down to double sided tape on a glass
slide. The sample was stuck inside the tube onto the tape (keeping a
flat base), and crazy glue was subsequently poured into the tube
covering the sample. The crazy glue was cured at the appropriate
time and temperature.

After curing, the samples were then polished down to ~10-15 um,
mounted on Cu slot grids and subsequently ion milled.

Addendum:
Morphologically (e.g., the thickness of a thin anodized layer or
shape of a sintered particulate), the presence of a polymer layer
during ion milling is definitely beneficial because it provides a
watermark for the oxide layer. That is to say, one can be assured
that the edge of an oxidized layer or particle is true, and has not
been milled away during preparation. Yet, for spectroscopy, the
samples we were analyzing required the absence of a carbon
signal. The presence of the crazy glue during ion milling tended to
give a thin film of redeposited carbon on the samples, thereby
confounding our data analysis. In this case, we infiltrated with
crazy glue in one of the aforementioned manners, polished the sample
to ~10-15 um, affixed them to Cu slot grids and finally put them
through a series of solution baths. As prescribed by an older email
on the listserver, the sample was bathed in pure acetone for 10
minutes, followed by a pure ethanol bath for 10 minutes and finally
bathed in pure (as pure as possible in one's lab) water for 10
minutes. Between each bath the sample was allowed to dry. The
acetone removes the remnants of the crazy glue. The ethanol helps to
remove any remaining acetone residue, and finally the water helps to
remove any ethanol residue.

Results:
After plasma cleaning the samples for 10 minutes (in the case of the
bathed samples), the reduction of C signal in our samples was greatly
reduced if not eliminated. In order to do STEM/EELS, a cold stage
was used to further reduce any carbon contamination from the
microscope. As previously mentioned, when the crazy glue was left
intact during ion milling, the morphology of the anodized thin films
could easily be observed.

Regards
Matt Olszta
Department of Materials Science and Engineering
Penn State University


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From: hbarwood-at-troy.edu
Date: Tue, 25 Oct 2005 15:14:37 -0500
Subject: [Microscopy] 23mm to 30mm eyepiece adapter

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I would like to mount a small webcam that I've adapted for NIR imaging in
one eyepiece of a Nikon SMZ-10 microscope. I'm using a 23mm eyepiece, and
the scope eyepiece is a 30mm size. Does anyone know of an inexpensive source
of an adapter ring?

Henry Barwood
Associate Professor of Science, Earth Science
Department of Math and Physics
MSCX 312G
Troy University
Troy, Alabama 36082
hbarwood-at-troy.edu


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From: phillipst-at-missouri.edu
Date: Tue, 25 Oct 2005 16:33:08 -0500
Subject: [Microscopy] Interesting Zeiss booklet on Abbe's lifework

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I recently received a copy of the Zeiss Innovation magazine which focuses
on Ernst Abbe's contributions to microscopy. In addition to some
interesting history, there are nice explanations of NA, immersion fluids
and magnification. The back of the book is typical ad material but the
front is worth a read. if you didn't get one, ask your zeiss rep or email
them. i have no financial interest in zeiss - i am just a user (sometimes
happy, sometimes not) of the product. Tom Phillips



Thomas E. Phillips, PhD
Professor of Biological Sciences
Director, Molecular Cytology Core
2 Tucker Hall
University of Missouri
Columbia, MO 65211-7400

573-882-4712 (office)
573-882-0123 (fax)
PhillipsT-at-missouri.edu



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From: jmkrupp-at-cats.ucsc.edu
Date: Tue, 25 Oct 2005 18:56:16 -0500
Subject: [Microscopy] how to dehumidify?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi:

A lab user is having problems with ice crystals growing on cryo-grids
during transfers to the microscope.

Room humidity varies, but is typically 50%. Any tricks for reducing it and
ice crystal growth?

I thought about a room dehumidifier, but the ones I see say they only go
down to 30% and I don't know how effective it would be to try to do the
whole room.

Some kind of chamber with silica gel or ??.

Thanks

Jon

Jonathan Krupp
Microscopy & Imaging Lab
C230 Earth & Marine Science
University of California
Santa Cruz, CA 95064
(831) 459-2477
jmkrupp-at-cats.ucsc.edu



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From: walck-at-southbaytech.com
Date: Tue, 25 Oct 2005 21:00:28 -0500
Subject: [Microscopy] how to dehumidify?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Jonathon,
There is an easy way to do this. Get a garbage bag and run a Tygon(R)
tube from a cylinder of nitrogen or from bleed off from liquid nitrogen.
Put your bag over your sample and put the tube into the bag and flush
the volume with nitrogen. Alternatively, you can use or newly
introduced Thing-A-Ma-Jug(TM) which can make a positive pressure of N2
or CO2 from the head space of a Dewar of liquid nitrogen or dry ice.
Transport your sample under the bag with the nitrogen to the TEM and
work under the bag. (Note, I said under the bag, not in the bag.) I
think that you can keep the humidity under the bag close to 0%.

If you use a high flow of N2, please make sure that you have adequate
ventilation.

-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

US Toll Free: 1-800-728-2233
Tel: (949) 492-2600
Fax: (949) 492-1499

www.southbaytech.com
walck-at-southbaytech.com


-----Original Message-----
X-from: jmkrupp-at-cats.ucsc.edu [mailto:jmkrupp-at-cats.ucsc.edu]
Sent: Tuesday, October 25, 2005 5:02 PM
To: Walck-at-SouthBayTech.com

Hi:

A lab user is having problems with ice crystals growing on cryo-grids
during transfers to the microscope.

Room humidity varies, but is typically 50%. Any tricks for reducing it
and ice crystal growth?

I thought about a room dehumidifier, but the ones I see say they only go
down to 30% and I don't know how effective it would be to try to do the
whole room.

Some kind of chamber with silica gel or ??.

Thanks

Jon

Jonathan Krupp
Microscopy & Imaging Lab
C230 Earth & Marine Science
University of California
Santa Cruz, CA 95064
(831) 459-2477
jmkrupp-at-cats.ucsc.edu



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From: gcc-at-couger.com
Date: Tue, 25 Oct 2005 22:35:21 -0500
Subject: [Microscopy] Re: how to dehumidify?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html



jmkrupp-at-cats.ucsc.edu wrote:
} Hi:
}
} A lab user is having problems with ice crystals growing on cryo-grids
} during transfers to the microscope.
}
} Room humidity varies, but is typically 50%. Any tricks for reducing it and
} ice crystal growth?
}
} I thought about a room dehumidifier, but the ones I see say they only go
} down to 30% and I don't know how effective it would be to try to do the
} whole room.
}
} Some kind of chamber with silica gel or ??.
}
} Thanks
}
} Jon
}
Put a dehumidifier or large boxes of dehumidifying agent than you can
regenerate with heat in a plastic tent over his work station or even a
smaller tent around the scope. The humidly is much easier and cheaper to
control in a small space and two make an airlock design so other
experiments in the room don't mess with yours.

In cold rooms the space is usually filled with work sooner than later.

Gordon
Gordon Couger

I collect links on information related to light microscopes.
www.couger.com/microscope/links/gclinks.html
Please forward anything you think might be useful to others.
Microscope Documentation is at www.science-info.org



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From: rcsaic-at-sbcglobal.net
Date: Wed, 26 Oct 2005 09:17:17 -0500
Subject: [Microscopy] General TEM: Software for generating SAD patterns

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

What software is currently available, commercial or freeware, that will
generate single-crystal selected-area diffraction patterns for a given
crystal for a given zone axis, given its cell parameters and atomic
positions etc? The Desktop Microscopist product used to do this, but it
seems to have disappeared from the landscape in the intervening last few
years that I've been away from microscopy (can't find it on Google). I
remember that most HRTEM multislice image simulation programs will generate
SA or CBED patterns, but I'm looking for something a little simpler.

Thanks,

Roy Christoffersen
SAIC
Code KA-Astromaterials Directorate
NASA Johnson Space Center



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From: YANGA-at-AGR.GC.CA
Date: Wed, 26 Oct 2005 09:21:37 -0500
Subject: [Microscopy] AskAMicroscopist: Vibrio parahaemolyticus samples for SEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html





The advice from Dr. Oshel does not solve the problem that the bacteria would not stay together during fixation in aqueous glutaraldehyde. When I wanted to see the surface of a colony, I fixed the small pieces of the agar gel with the colonies on them in osmium tetroxide vapour in a humid chamber and then carefully dehydrated them in a graded ethanol series.

If the original writer only wants to get images of the bacteria irrespective whether they are from the top or the bottom of the colony, it would be advisable to gently release (from a pasteur pipette) a thin layer of } 40°C 3-4% agar sol. (I used to incorporate glutaraldehyde into the agar sol before use). This coating would immobilize the bacteria in the colony and the sample would be dehydrated and critical-point dried as usual. The dried agar coating would be opened easily before mounting the bacteria on a stub.

You may provide this kind of advice and you do not need to mention my name.
Regards,

Milos

Note: Milos is a retired scientist.

Ann Fook

-----Original Message-----
X-from: Yang, Ann-Fook
Sent: Wednesday, October 26, 2005 9:54 AM
To: Kalab, Miloslav

Carefully cut out 1 millimeter X ~10 mm X ~1 mm pieces of the agar where the bacteria are. Fix for a couple of hours at room temperature (or overnight in the 'frig) and dehydrate as usual. After the final 100% EtOH step, drop the pieces into liquid nitrogen. The EtOH freezes vitreously, and so won't cause any freezing artifacts. If the pieces don't spontaneously fall apart, break them with a razor blade. This will expose the bacteria in the agar. (This method also works for all sorts of things.) Return to 100% EtOH, then critical-point dry.

Phil

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859
(989) 774-3576



-----Original Message-----
X-from: eeloe-at-ucsd.edu [mailto:eeloe-at-ucsd.edu]
Sent: Mon 24-Oct-05 19:21
To: Oshel, Philip Eugene

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (eeloe-at-ucsd.edu) from http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Monday, October 24, 2005 at 17:34:46
---------------------------------------------------------------------------

Email: eeloe-at-ucsd.edu
Name: Emiley Eloe

Organization: Scripps Institution of Oceanography

Education: Graduate College

Location: La Jolla, CA USA

Question: I'm trying to prepare Vibrio parahaemolyticus samples for SEM on 2216-marine agar plates and am having difficulties visualizing the bacterial cells on the agar surface. I have used a 1% glut/0.1M cacodylic acid plus 3.5% salt fixative and fixed cells by gently pouring over the agar plate. It appears as though cells are somehow diffusing or migrating into the agar and avoiding being fixed directly on the surface. Any help would be appreciated.


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From: oshel1pe-at-cmich.edu
Date: Wed, 26 Oct 2005 11:04:04 -0500
Subject: [Microscopy] AskAMicroscopist: Vibrio parahaemolyticus samples for SEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

It won't? Odd. I've used the fix-EtOH cryofracture methods many times to study bacteria and yeast within (and on) agar without the critters "not stay[ing] together". The glutaraldehyde fixation step fixes the bacteria in place quite nicely.
Phil

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859
(989) 774-3576


The advice from Dr. Oshel does not solve the problem that the bacteria would not stay together during fixation in aqueous glutaraldehyde. When I wanted to see the surface of a colony, I fixed the small pieces of the agar gel with the colonies on them in osmium tetroxide vapour in a humid chamber and then carefully dehydrated them in a graded ethanol series.

If the original writer only wants to get images of the bacteria irrespective whether they are from the top or the bottom of the colony, it would be advisable to gently release (from a pasteur pipette) a thin layer of } 40°C 3-4% agar sol. (I used to incorporate glutaraldehyde into the agar sol before use). This coating would immobilize the bacteria in the colony and the sample would be dehydrated and critical-point dried as usual. The dried agar coating would be opened easily before mounting the bacteria on a stub.

You may provide this kind of advice and you do not need to mention my name.
Regards,

Milos

Note: Milos is a retired scientist.

Ann Fook

-----Original Message-----
X-from: Yang, Ann-Fook
Sent: Wednesday, October 26, 2005 9:54 AM
To: Kalab, Miloslav

Carefully cut out 1 millimeter X ~10 mm X ~1 mm pieces of the agar where the bacteria are. Fix for a couple of hours at room temperature (or overnight in the 'frig) and dehydrate as usual. After the final 100% EtOH step, drop the pieces into liquid nitrogen. The EtOH freezes vitreously, and so won't cause any freezing artifacts. If the pieces don't spontaneously fall apart, break them with a razor blade. This will expose the bacteria in the agar. (This method also works for all sorts of things.) Return to 100% EtOH, then critical-point dry.

Phil

Philip Oshel
Microscopy Facility Supervisor
Department of Biology
Central Michigan University
Mt. Pleasant, MI 48859
(989) 774-3576



-----Original Message-----
X-from: eeloe-at-ucsd.edu [mailto:eeloe-at-ucsd.edu]
Sent: Mon 24-Oct-05 19:21
To: Oshel, Philip Eugene

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (eeloe-at-ucsd.edu) from http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Monday, October 24, 2005 at 17:34:46
---------------------------------------------------------------------------

Email: eeloe-at-ucsd.edu
Name: Emiley Eloe

Organization: Scripps Institution of Oceanography

Education: Graduate College

Location: La Jolla, CA USA

Question: I'm trying to prepare Vibrio parahaemolyticus samples for SEM on 2216-marine agar plates and am having difficulties visualizing the bacterial cells on the agar surface. I have used a 1% glut/0.1M cacodylic acid plus 3.5% salt fixative and fixed cells by gently pouring over the agar plate. It appears as though cells are somehow diffusing or migrating into the agar and avoiding being fixed directly on the surface. Any help would be appreciated.


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From: terry-at-AsylumResearch.com
Date: Wed, 26 Oct 2005 13:08:17 -0500
Subject: [Microscopy] AFM Technical Sales Positions Available

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Asylum Research, a premier manufacturer of atomic force microscopes,
has two positions available for East Coast Technical Sales.
Information can be found http://www.asylumresearch.com/About/
About.shtml#CR

Terry Mehr
Asylum Research
www.AsylumResearch.com

==============================Original Headers==============================
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From: alan.wood-at-JUSTIS.COM
Date: Thu, 27 Oct 2005 08:04:38 -0500
Subject: [Microscopy] RE: viaWWW: M7A Yellow blue edging on image

Contents Retrieved from Microscopy Listserver Archives
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Curt Lamberth wrote:

} I have a Wild M7A stereomicroscope and the image(s) are edged
} with yellow on one side and, if you close one eye, blue on
} the other. This causes a yellow cast to object edges and is
} very annoying.
}
} I am using either x20 or x10 eyepieces, with LED or f-optic
} ring illumination. The problem is most obvious under higher
} magnifications.
}
} Does anyone know why this happens, and how it can be solved?

I expect I will get hate mail from Wild fans, but I think you are seeing
chromatic aberration. There is nothing you can do about it, except buy a
better microscope.

I am not familiar with the M7A, but in my last job I used several Wild M5
stereos. One of them showed yellow/blue aberration, and the others showed
red/green aberration. They were all regularly serviced by Leitz.

The Zeiss stereos used by the other entomologists, and the Olympus SZ-III
stereos used for training courses, did not show any obvious chromatic
aberration.

--
Alan Wood
http://www.alanwood.net (Unicode, special characters, pesticide names)

==============================Original Headers==============================
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From: kjl226-at-vt.edu
Date: Thu, 27 Oct 2005 08:31:24 -0500
Subject: [Microscopy] viaWWW: Protcol for embedding whole mosquitos

Contents Retrieved from Microscopy Listserver Archives
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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (kjl226-at-vt.edu) from http://microscopy.com/MicroscopyListserver/MLFormMail.html on Wednesday, October 26, 2005 at 09:49:15
---------------------------------------------------------------------------

Email: kjl226-at-vt.edu
Name: Kathy lowe

Organization: Virginia Tech, College of Vet. Medicine

Title-Subject: [Filtered] MListserver: Protcol for embedding whole mosquitos

Question: Does anyone have a procedure for processing and embedding whole
mosquitos for TEM?
Kathy Lowe

---------------------------------------------------------------------------

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From: RW-at-web.de
Date: Thu, 27 Oct 2005 08:33:15 -0500
Subject: [Microscopy] AskAMicroscopist: embeding alive yeastcells

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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (RW-at-web.de) from http://www.microscopy.com/Ask-A-Microscopist/Ask-A-Microscopist.html on Thursday, October 27, 2005 at 05:24:16
---------------------------------------------------------------------------

Email: RW-at-web.de
Name: Ramona Wesselman

Organization: Center for Nanotchnology

Education: Graduate College

Location: Rheine, germany

Question: Hallo,
I am working with Yeast, I want to know if you treid to use Citifluor for embeding alive yeastcells, or if you can give me an advice for another embeding medium which is possible for yeast cells and has an index of refraction of 1,46 . Thanks!

---------------------------------------------------------------------------

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From: MAOKeefe-at-lbl.gov
Date: Thu, 27 Oct 2005 09:04:21 -0500
Subject: [Microscopy] Re: General TEM: Software for generating SAD

Contents Retrieved from Microscopy Listserver Archives
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Roy,

Probably the simplest way is to use an HREM image and diffraction
simulation package.

The UIUC code for electron microscopy is at:
http://emaps.mrl.uiuc.edu/

You could try the diffraction and image simulation software from
HREMresearch: http://www.hremresearch.com/Eng/simulation.html

If you just need a quick calculation now and then, consider EMS at
http://cimesg1.epfl.ch/CIOL/ems.html

A much "heavier" package is the Cerius:
http://cimewww.epfl.ch/EMYP/comp_sim.html
but you'll need some "cerious" money!

Mike O'Keefe
Director, MSA


==============================Original Headers==============================
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From: TindallR-at-missouri.edu
Date: Thu, 27 Oct 2005 12:43:35 -0500
Subject: [Microscopy] Immuno EM---GFP

Contents Retrieved from Microscopy Listserver Archives
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Dear Listers,

I'm curious to see if anyone has any words of wisdom about
immunostaining of GFP in general. I'd be interested in experiences
relating to DAB-HRP labeling and/or immunogold, both pre- and
post-embedding. Cryosections, too! (There, that ought to keep you
busy.)

More specifically, are there any danger spots in the fixation or
embedding processes that could negatively affect the labeling process,
or even destroy the protein itself?

I know it's one of those overly broad questions, but I am mainly
interested in how, if at all, labeling GFP might be different that
labeling other proteins. I've not had much luck going through our
library on finding GFP-specific material, and I'm still Googling away.

By the way, you're all invited to dinner at my place tonight by way of
thanks. My Honduran in-laws are in town and the food is good and
plentiful and the music is Latin. Yes, people CAN cook and dance at the
same time.

Randy Tindall
EM Specialist
Electron Microscopy Core Facility---We Do Small Well!
W122 Veterinary Medicine
University of Missouri
Columbia, MO 65211
Tel: (573) 882-8304
Fax: (573) 884-2227
Email: tindallr-at-missouri.edu
Web: http://www.emc.missouri.edu







==============================Original Headers==============================
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From: zaluzec-at-microscopy.com
Date: Thu, 27 Oct 2005 13:24:04 -0500
Subject: [Microscopy] Re: Software for generating SAD patterns

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Roy

There is also the commerical suite of programs

Crystal Maker, Single Crystal, Crystal Diffract.

http://www.crystalmaker.com

Your Friendly Neighborhood SysOp
Nestor

Disclaimer: I have no financial interests in any of these programs
I do however use them.



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From: phillipst-at-missouri.edu
Date: Thu, 27 Oct 2005 14:18:53 -0500
Subject: [Microscopy] Re: Immuno EM---GFP

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Randy - Check out Grabenbauer et al (1005) Nature Methods 2(11):857-
Correlative microscopy and electron tomography of GFP through
photooxidation - they use GFP bleaching to drive DAB oxidation into an
electron dense precipitate.

I am old enough to have done a fair amount of DAB immunolabeling at the EM
level. It is much less satisfying than colloidal gold. So maybe a gold
method would be better in some circumstances.

GFP survives PF but not ethanol.

And while I believe that people can dance and cook at the same time, I have
yet to see you dance whenever I have been at your home. Tom



At 12:46 PM 10/27/05, you wrote:



} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

Thomas E. Phillips, PhD
Professor of Biological Sciences
Director, Molecular Cytology Core
2 Tucker Hall
University of Missouri
Columbia, MO 65211-7400

573-882-4712 (office)
573-882-0123 (fax)
PhillipsT-at-missouri.edu



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From: TrogadisJ-at-smh.toronto.on.ca
Date: Thu, 27 Oct 2005 16:09:45 -0500
Subject: [Microscopy] heating live cells

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Fellow Microscopists

We are looking for a device for maintaining a constant temperature
inside a plexiglass incubator which is installed around the stage of an
inverted microscope. Volume around 2 cu. ft.

We now have an external heating unit with temperature control that
blows warm air into the incubator, however the air then flows out
through small openings and it is difficult to regulate the CO2 levels
because the air is constantly changing. Besides, the warm air results in
fluid evaporation.

Ideally, I'm looking for a radiant source of heat to place inside the
incubator - no light bulbs, for obvious reasons. We do have a thermistor
to regulate the temperature into which the device could be plugged.

Any suggestions?
Thank you
Judy

Judy Trogadis
Bio-Imaging Coordinator
St. Michael's Hospital, 7Queen
30 Bond St.
Toronto, ON M5B 1W8
Canada
ph: 416-864-6060 x6337
pager: 416-685-9219
fax: 416-864-6043
trogadisj-at-smh.toronto.on.ca


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From: Rosemary.White-at-csiro.au
Date: Thu, 27 Oct 2005 16:56:12 -0500
Subject: [Microscopy] Re: Immuno EM---GFP

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Randy,
Haven't done immunolabelling on tissues or sections, but the molecular
biologists here use anti-GFP and standard procedures to detect their
labelled proteins on westerns. These are not native gels, just standard
SDS-PAGE gels blotted onto nitrocellulose membrane, so the protein is
denatured.
cheers,
Rosemary

Rosemary White rosemary.white-at-csiro.au
CSIRO Plant Industry ph. 02-6246 5475
GPO Box 1600 mob. 0402 835 973
Canberra, ACT 2601 fax. 02-6246 5334
Australia


} From: TindallR-at-missouri.edu
} Reply-To: TindallR-at-missouri.edu
} Date: Thu, 27 Oct 2005 12:50:03 -0500
} To: rosemary.white-at-csiro.au
} Subject: [Microscopy] Immuno EM---GFP
}
}
}
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
} Dear Listers,
}
} I'm curious to see if anyone has any words of wisdom about
} immunostaining of GFP in general. I'd be interested in experiences
} relating to DAB-HRP labeling and/or immunogold, both pre- and
} post-embedding. Cryosections, too! (There, that ought to keep you
} busy.)
}
} More specifically, are there any danger spots in the fixation or
} embedding processes that could negatively affect the labeling process,
} or even destroy the protein itself?
}
} I know it's one of those overly broad questions, but I am mainly
} interested in how, if at all, labeling GFP might be different that
} labeling other proteins. I've not had much luck going through our
} library on finding GFP-specific material, and I'm still Googling away.
}
} By the way, you're all invited to dinner at my place tonight by way of
} thanks. My Honduran in-laws are in town and the food is good and
} plentiful and the music is Latin. Yes, people CAN cook and dance at the
} same time.
}
} Randy Tindall
} EM Specialist
} Electron Microscopy Core Facility---We Do Small Well!
} W122 Veterinary Medicine
} University of Missouri
} Columbia, MO 65211
} Tel: (573) 882-8304
} Fax: (573) 884-2227
} Email: tindallr-at-missouri.edu
} Web: http://www.emc.missouri.edu
}
}
}
}
}
}
}
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} 10, 23 -- From: "Tindall, Randy D." {TindallR-at-missouri.edu}
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From: jmkrupp-at-cats.ucsc.edu
Date: Thu, 27 Oct 2005 19:06:29 -0500
Subject: [Microscopy] LD vs 'regular' LM objectives

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Laura,

I haven't seen any replies to your question on the Microscopy
Listserver, so I thought I'd ask a biologist friend of mine about what
procedure scientists use to look at cancer cells under the microscope.
Of course, someone (probably much more knowledgable than I) may have
replied to you off-server.

Anyway, to detect cancer, pathologists use light (optical) microscopes
to look at slices of tissue on glass slides stained to show internal
cell organelles, and sometimes relationships of cells to other cells.

Sometimes, they may examine suspensions of blood or bone marrow cells
spread on glass slides and stained to detect unusual features. These
doctors are experts in knowing what normal tissues and cells look like
and can detect unusual features, such as enlarged and or strangely
convoluted nuclei, unusually long and numerous microvilli, or cells
invading tissue where they should not be located.

Additionally, they may order special stains to detect kinds of antigens
that are not found on normal tissue or that show up in unusual
locations, for example, whether breast or prostate tissue is found in
some other organ. Some pathologists and researchers use the electron
microscope to detect ultrafine structure (structure smaller than you see
with an optical microscope) inside cells -- such as premelanosomes,
desmosomes, or secretory granules -- to identify different types of
tumor cells. It is very important for the doctors to know the kind of
cancer is present because often different types respond to different
therapies.

Other experts doing research on tissues and cell cultures may use
special forms of optical microscopy such as fluorescence or confocal
microscopy to detect the presence of particular structures or locate
special antigens in cells. Researchers can contribute to the knowledge
of how cancer cells live and therefore what kinds of agents might be
used to kill them.

I hope that helps.

Mike O'Keefe
MSA Director

----- Original Message -----
X-from: loz_jay01-at-hotmail.com

Hi

Anyone like to offer an opinion of the differences in image quality between
LD and standard objective lenses for light microscopy including
fluorescence?

We have a 'hybrid' scope, some LD, some standard objectives and are trying
to decide which kind to add to go to make them all the same.

Pretty general question, I know, but give it a shot if you have some ideas.

Thanks

Jon


Jonathan Krupp
Microscopy & Imaging Lab
C230 Earth & Marine Science
University of California
Santa Cruz, CA 95064
(831) 459-2477
jmkrupp-at-cats.ucsc.edu



==============================Original Headers==============================
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From: payton-at-auburn.edu
Date: Thu, 27 Oct 2005 19:31:37 -0500
Subject: [Microscopy] viaWWW: Coating Ciruit Board cross-sections for SEM analysis

Contents Retrieved from Microscopy Listserver Archives
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---------------------------------------------------------------------------

Email: payton-at-auburn.edu
Name: Lewis Payton

Organization: Auburn University

Title-Subject: [Filtered] MListserver: Coating Ciruit Board cross-sections for SEM analysis

Question: Hello,

Can anyone recommend a system for carbon coating or gold coating an SEM specimen.

We are cross-sectioning circuit boards to analyze the solder balls. Unfortunately, the circuit board edging is non-conductive and scattering the beam.

We've used a gold coater and a carbon coater with good success, but buying one is prohibitively expensive it seems (as is renting the one we are using per sample).

I'd greatly appreciate any advice anyone might have in general.

Thank you,
Lewis



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From: avallecorsa-at-ups.edu
Date: Thu, 27 Oct 2005 19:32:00 -0500
Subject: [Microscopy] viaWWW: Emscope SP2000

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (avallecorsa-at-ups.edu) from http://www.microscopy.com/MLFormMail.html on Thursday, October 27, 2005 at 11:21:06
---------------------------------------------------------------------------

Email: avallecorsa-at-ups.edu
Name: Al vallecorsa

Organization: University of Puget Sound

Title-Subject: [Filtered] MListserver:

Question: We have an old Emscope SP2000, that we would like to get working. Can anyone supply a manual or information about it. One of our professors bought it used on E-bay.
Thank You, Al

---------------------------------------------------------------------------

==============================Original Headers==============================
6, 12 -- From zaluzec-at-microscopy.com Thu Oct 27 19:32:00 2005
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From: dhorne-at-interchange.ubc.ca
Date: Thu, 27 Oct 2005 19:32:26 -0500
Subject: [Microscopy] viaWWW: Platelet isolation for SEM

Contents Retrieved from Microscopy Listserver Archives
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---------------------------------------------------------------------------

Email: dhorne-at-interchange.ubc.ca
Name: Derrick Horne

Organization: University of British Columbia

Title-Subject: [Filtered] MListserver: Platelet isolation for SEM

Question: Anyone have experience isolating platelets (non-adherent) without activating them for SEM imaging?

I need a method for a 2nd year student and I'm not sure in what direction to take him. He has already tried fixing the plasma, with the expected gelatinous goopy result. How about diluting the PRP (platelet-rich plasma) with PB/saline and filtering it prior to fixation?

I've come across a size-exclusion chromatography method, but we are not setup to do that in our lab.

Any ideas would be appreciated.

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From: mpease-at-jhmi.edu
Date: Thu, 27 Oct 2005 19:32:52 -0500
Subject: [Microscopy] viaWWW: osmolarity of PBS

Contents Retrieved from Microscopy Listserver Archives
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---------------------------------------------------------------------------

Email: mpease-at-jhmi.edu
Name: Mary Ellen Pease

Organization: Johns Hopkins University School of Medicine

Title-Subject: [Filtered] MListserver:

Question: I am interested in learning the osmolarity of PBS as compared to 0.1M Sorenson's Phosphate buffer. I can find osmolarity info on Sorenson's but not on PBS. A colleague of mine perserved tissues intended for epoxy processing in fixative made in PBS rather than Sorenson's. Any idea if this will compromise the morphology in 1um, tol blue stained sections?

thanks!

---------------------------------------------------------------------------

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From: W.Muss-at-salk.at
Date: Fri, 28 Oct 2005 02:07:09 -0500
Subject: [Microscopy] Re: osmolarity of PBS

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Good morning,
dear Mary Ellen,

osmolarity of hydrous solutions, especially of "buffers" - as I know the
item - always depends on concentration of } effective { ions in solution.
So, in the case of 0.1 M Soerensen buffer you will have in solution a
certain amount of ions (and, because it is a PO4 buffer, cf. dissociation
of substances/ions, you will have some material which is not dissolved/in
solution).... - as you said - you will have some measure(s) on the
osmolarity/osmolality of (assuming 0.15M) Soerensen phosphate buffer--} how
much is your measure for this solution?.

If you have "PBS", you have to know the concentration (in M) or have to
calculate ionic pressure by the amount of buffer salt(s) in the solution.

Also not to forget that higher concentrated PO4-buffer solutions (being it
either NaOH-NaH2PO4 or Na2HPO4-NaH2PO4-mixtures) you hardly will be able
to measure correctly, e.g. by an osmometer....this is due to the uncomplete
dissociation of the PO4 ions if the ionic strength is high (e.g.0.2M: here
you will not get an exact AND reproducible mosmol-value). If you dilute
your buffer, say to 0.1M, or 0.05M you will see that measurement by an
osmometer will result in a (more) stable and therefore correct value.

As a classical "measure" you will find } Millonig's { 0.13 M NaOH-Na2HPO4
-buffer at around 290-295 mosmol, and if you are adding some Sucrose
(Saccharose) or better Glucose, you will get a 0.13 M NaPO4 buffer (pH
around 7.2-7.4) amounting 300 mosmol (isotonicity of human blood).

If you need further information on that, please specify the concentration
of your PBS (or ingredients), perhaps one can calculate the osmolarity

best regards

Wolfgang Muss

Personal Communication Data:
OR Dr. Wolfgang Muss Member of
EM-Lab
Institute of Pathology, SALK
(Salzburger Landeskliniken gemeinnuetzige GesmbH)
Muellner Hauptstrasse 48
A-5020 SALZBURG AUSTRIA/EUROPE

and/or/alternatively

Paracelsus Medical Private University (PMU)
Institute of Pathology
Electron Microscopy Lab
Muellner Hauptstrasse 48
A-5020 SALZBURG, Austria/Europe
Phone work: +43+662+4482+4720
Mobile phone work:+43+662+4482-57704
Fax-No. at work: ++43+662+4482-882 ext (please, only by indicating: "c/o
W.Muss")
E-Mail work: W.Muss-at-SALK.at

Mobile-phone private: ++43+676+5 369-456
E-Mail private: wij.Muss-at-aon.at

----------
Von: mpease-at-jhmi.edu[SMTP:mpease-at-jhmi.edu]
Antwort an: mpease-at-jhmi.edu
Gesendet: Freitag, 28. Oktober 2005 02:39
An: W.Muss-at-salk.at
Betreff: [Microscopy] osmolarity of PBS


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October 27, 2005 at 15:07:40
---------------------------------------------------------------------------

Email: mpease-at-jhmi.edu
Name: Mary Ellen Pease

Organization: Johns Hopkins University School of Medicine

Title-Subject: [Filtered] MListserver:

Question: I am interested in learning the osmolarity of PBS as compared to
0.1M Sorenson's Phosphate buffer. I can find osmolarity info on Sorenson's
but not on PBS. A colleague of mine perserved tissues intended for epoxy
processing in fixative made in PBS rather than Sorenson's. Any idea if this
will compromise the morphology in 1um, tol blue stained sections?

thanks!

---------------------------------------------------------------------------

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==============================Original Headers==============================
25, 29 -- From W.Muss-at-salk.at Fri Oct 28 02:07:09 2005
25, 29 -- Received: from Hermes.salk.at (hermes.lks.at [193.170.167.9])
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25, 29 -- From: MUSS Wolfgang PhD {W.Muss-at-salk.at}
25, 29 -- Reply-To: "W.Muss-at-salk.at" {W.Muss-at-salk.at}
25, 29 -- To: "'mpease-at-jhmi.edu'" {mpease-at-jhmi.edu} ,
25, 29 -- "'microscopy-at-microscopy.com'"
25, 29 -- {microscopy-at-microscopy.com}
25, 29 -- Subject: [Microscopy] Re: osmolarity of PBS
25, 29 -- Date: Fri, 28 Oct 2005 09:06:57 +0200
25, 29 -- Return-Receipt-To: MUSS Wolfgang PhD {W.Muss-at-salk.at}
25, 29 -- Organization: SALK,Salzburger Landeskliniken, Pathologie, EM-Labor
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From: mike.wombwell-at-quorumtech.com
Date: Fri, 28 Oct 2005 06:05:09 -0500
Subject: [Microscopy] viaWWW: Emscope SP2000

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Al,

We - Quorum Technologies - can mail you a copy of the original SP2000
operating manual, including wiring diagrams. Please be aware that the
SP2000 was discontinued around 15 years ago and so availability or
spares is likely to be limited. You may like to contact our local (US)
distributor Energy Beam Sciences (http://www.ebsciences.com/) for
further information and assistance.

Our relationship to "Emscope" products is now somewhat tenuous, but
back in 1988 the UK based Emscope company was acquired by Bio-rad, the
then owners of the Polaron range - now manufactured by Quorum
Technologies (for a potted history see:
http://www.quorumtech.com/history.htm)

Incidentally, many operating manuals for old products are available as
downloads from our website - including the Emscope SC500 / SC500A
sputter coater (see:
http://www.quorumtech.com/Tech_Support/old-manuals.htm)

Best regards,

Mike Wombwell
Sales & Marketing Director
Quorum Technologies
Newhaven, East Sussex, UK
Tel: +44(0)1273 510535
Tel: +44(0)1273 511063 (direct)
Fax: +44(0)1273 510536
mike.wombwell-at-quorumtech.com
http://www.quorumtech.com
E & O E








-----Original Message-----
X-from: avallecorsa-at-ups.edu [mailto:avallecorsa-at-ups.edu]
Sent: 28 October 2005 01:46
To: Mike Wombwell

Below is the result of your feedback form (NJZFM-ultra-55). It was
submitted by (avallecorsa-at-ups.edu) from
http://www.microscopy.com/MLFormMail.html on Thursday, October 27, 2005
at 11:21:06
------------------------------------------------------------------------
---

Email: avallecorsa-at-ups.edu
Name: Al vallecorsa

Organization: University of Puget Sound

Title-Subject: [Filtered] MListserver:

Question: We have an old Emscope SP2000, that we would like to get
working. Can anyone supply a manual or information about it. One of our
professors bought it used on E-bay.
Thank You, Al

------------------------------------------------------------------------
---

==============================Original
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29, 23 -- From mike.wombwell-at-quorumtech.com Fri Oct 28 06:05:08 2005
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From: paults3gj-at-yahoo.com
Date: Fri, 28 Oct 2005 07:50:23 -0500
Subject: [Microscopy] viaWWW: ISI TV mini-SEM documentation needed

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (paults3gj-at-yahoo.com) from http://microscopy.com/MicroscopyListserver/MLFormMail.html on Friday, October 28, 2005 at 00:58:05
---------------------------------------------------------------------------

Email: paults3gj-at-yahoo.com
Name: Paul S

Organization: CWRU

Title-Subject: [Filtered] MListserver: ISI TV mini-SEM documentation needed

Question: I have an ISI TV mini-SEM model M-RS-2-2 made in 1975. It appears to have all the required parts. I'm trying to get this unit operating and need service documentation. I'd be happy to just get a copy of the complete electrical schematic.

If anyone knows where to get documentation or spare parts for this SEM or if anyone could provide me with an eletrical schematic, please let me know.

If anyone has used this SEM and could give me their general impression of its performance (mag, resolution, etc), I'd also appreciate it.

Thanks in advance.

Paul

---------------------------------------------------------------------------

==============================Original Headers==============================
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From: ludovic.pinier-at-thalesgroup.com
Date: Fri, 28 Oct 2005 07:51:00 -0500
Subject: [Microscopy] viaWWW: TOPCON ABT-150F parts

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (ludovic.pinier-at-thalesgroup.com) from http://www.microscopy.com/MLFormMail.html on Friday, October 28, 2005 at 03:21:50
---------------------------------------------------------------------------

Email: ludovic.pinier-at-thalesgroup.com
Name: Ludovic Pinier

Title-Subject: [Filtered] looking for TOPCON ABT-150F parts

Question: Hello microscopists,

I work on a TOPCON ABT-150F microscope. It seems to be a quite rare SEM, that is no more supported by the manufacturer. I need gaskets because of filament replacement and I don't know if they still are commercially available.

Does anyone knowing that microscope can tell me where to find replacement parts ?

Thanks,
Ludovic Pinier



---------------------------------------------------------------------------

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From: phillipst-at-missouri.edu
Date: Fri, 28 Oct 2005 08:22:09 -0500
Subject: [Microscopy] Re: LD vs 'regular' LM objectives

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

The quality of the image and its ability to capture light (i.e., brightness
of fluorescence images) is determined by the numerical aperture (NA) and
the magnification of the objective. Long working distance objectives
generally have a lower NA so they produce lower resolution and less bright
fluorescent images than standard working distance objectives with similar
magnifications but higher NA's. For a given magnification, the higher the
NA, the brighter and sharper the image. For a given NA, the lower the
magnification, the brighter the image but I think you need to know the
actual NA and mag to predict the effect on resolution.

At 07:07 PM 10/27/05, you wrote:



} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

Thomas E. Phillips, PhD
Professor of Biological Sciences
Director, Molecular Cytology Core
2 Tucker Hall
University of Missouri
Columbia, MO 65211-7400

573-882-4712 (office)
573-882-0123 (fax)
PhillipsT-at-missouri.edu



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From: YANGA-at-AGR.GC.CA
Date: Fri, 28 Oct 2005 08:34:02 -0500
Subject: [Microscopy] heating live cells

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Judy,

I have heard from my electronic colleague that there are heating-tape, heating-cable, heating-pad, and heating-block you can use. Heating-tape of different lengths may be purchased at Canadian Tire. The length you need depends upon the dimensions, temperature requirement, and heat loss (insulated?). I believe there is an electronic shop, in you hospital, where you can seek help. Otherwise, write to me off list, I will ask my colleague to do some calculation and advise what the best choice is.

Ann Fook Yang
EM Unit/ Unite EM
AAFC/AAC
960 Carling Ave,
Ottawa,Ontario
Canada K1A 0C6
yanga-at-agr.gc.ca
Telephone/Téléphone: 613-759-1638
Facsimile/Télécopieur: 613-759-1701

Agriculture and Agri-Food Canada - Agriculture et Agroalimentaire Canada

-----Original Message-----
X-from: TrogadisJ-at-smh.toronto.on.ca [mailto:TrogadisJ-at-smh.toronto.on.ca]
Sent: Thursday, October 27, 2005 5:12 PM
To: Yang, Ann-Fook

Fellow Microscopists

We are looking for a device for maintaining a constant temperature
inside a plexiglass incubator which is installed around the stage of an
inverted microscope. Volume around 2 cu. ft.

We now have an external heating unit with temperature control that
blows warm air into the incubator, however the air then flows out
through small openings and it is difficult to regulate the CO2 levels
because the air is constantly changing. Besides, the warm air results in
fluid evaporation.

Ideally, I'm looking for a radiant source of heat to place inside the
incubator - no light bulbs, for obvious reasons. We do have a thermistor
to regulate the temperature into which the device could be plugged.

Any suggestions?
Thank you
Judy

Judy Trogadis
Bio-Imaging Coordinator
St. Michael's Hospital, 7Queen
30 Bond St.
Toronto, ON M5B 1W8
Canada
ph: 416-864-6060 x6337
pager: 416-685-9219
fax: 416-864-6043
trogadisj-at-smh.toronto.on.ca


==============================Original Headers==============================
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==============================Original Headers==============================
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From: jquinn-at-www.matscieng.sunysb.edu
Date: Fri, 28 Oct 2005 08:43:20 -0500
Subject: [Microscopy] re: Heating live cells

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


"Omega" is the first source in temperature.

www.omega.com

regards,

Jim





} From mail-at-ns.microscopy.com Fri Oct 28 09:37:17 2005
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} Reply-to: YANGA-at-AGR.GC.CA
} X-Resent-From: "Microscopy Listserver" {microscopy-at-microscopy.com}
} Subject: [Microscopy] RE: heating live cells
} Errors-To: MicroscopyListSpamFilter-at-microscopy.com
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} To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
} Hi Judy,
}
} I have heard from my electronic colleague that there are heating-tape, heating-cable, heating-pad, and heating-block you can use. Heating-tape of different lengths may be purchased at Canadian Tire. The length you need depends upon the dimensions, temperature requirement, and heat loss (insulated?). I believe there is an electronic shop, in you hospital, where you can seek help. Otherwise, write to me off list, I will ask my colleague to do some calculation and advise what the best choice is.
}
} Ann Fook Yang
} EM Unit/ Unite EM
} AAFC/AAC
} 960 Carling Ave,
} Ottawa,Ontario
} Canada K1A 0C6
} yanga-at-agr.gc.ca
} Telephone/Téléphone: 613-759-1638
} Facsimile/Télécopieur: 613-759-1701
}
} Agriculture and Agri-Food Canada - Agriculture et Agroalimentaire Canada
}
} -----Original Message-----
} X-from: TrogadisJ-at-smh.toronto.on.ca [mailto:TrogadisJ-at-smh.toronto.on.ca]
} Sent: Thursday, October 27, 2005 5:12 PM
} To: Yang, Ann-Fook
} Subject: [Microscopy] heating live cells
}
}
}
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
} Fellow Microscopists
}
} We are looking for a device for maintaining a constant temperature
} inside a plexiglass incubator which is installed around the stage of an
} inverted microscope. Volume around 2 cu. ft.
}
} We now have an external heating unit with temperature control that
} blows warm air into the incubator, however the air then flows out
} through small openings and it is difficult to regulate the CO2 levels
} because the air is constantly changing. Besides, the warm air results in
} fluid evaporation.
}
} Ideally, I'm looking for a radiant source of heat to place inside the
} incubator - no light bulbs, for obvious reasons. We do have a thermistor
} to regulate the temperature into which the device could be plugged.
}
} Any suggestions?
} Thank you
} Judy
}
} Judy Trogadis
} Bio-Imaging Coordinator
} St. Michael's Hospital, 7Queen
} 30 Bond St.
} Toronto, ON M5B 1W8
} Canada
} ph: 416-864-6060 x6337
} pager: 416-685-9219
} fax: 416-864-6043
} trogadisj-at-smh.toronto.on.ca
}
}
} ==============================Original Headers==============================
} 7, 19 -- From trogadisj-at-smh.toronto.on.ca Thu Oct 27 16:09:45 2005
} 7, 19 -- Received: from smh.toronto.on.ca (mail.smh.toronto.on.ca [199.71.175.103])
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} 7, 19 -- From: "Judy Trogadis" {TrogadisJ-at-smh.toronto.on.ca}
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From: frank.karl-at-degussa.com
Date: Fri, 28 Oct 2005 09:22:32 -0500
Subject: [Microscopy] LD vs 'regular' LM objectives

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Jim,

There's also an inexpensive package that Thierry Epicier built, based on
the SHRLI code I wrote waaay back ("Computed crystal structure images
for high resolution electron microscopy", M.A. O'Keefe, P.R. Buseck and
S. Iijima, Nature 274 (1978) 322-324).

A freeware version of Thierry's image and diffraction package can be
found at:
http://www.amc.anl.gov/ANLSoftwareLibrary/02-MMSLib/HREM/shrli/readme.txt

Alternatively, see the Listserver archives -- go to
http://www.microscopy.com/cgi-bin/ReadPrintEmailHTML.pl?filename=9411.txt
and do a find (ctrl-F) for SHRLI.

I haven't worked in this field for quite a while and I won't have access
to a working copy for the foreseeable future.

Mike
----- Original Message -----
X-from: Jim Quinn {jquinn-at-www.matscieng.sunysb.edu}





I don't want to start a flame war, I don't wish to lose my access to this
list server......

Your statement is only part of the story. Image quality is also affected
by the degree of correction built into the objective. An achromatic
objective may have corrections for one color spherical aberration and two
colors chromatic aberration. An apochromatic would have corrections for
two color spherical aberration and three colors chromatic aberration. I
will not even attempt to fit in flat fields, fluorites, semifluorites and
the old fashion gem lens. With that we still have a series of corrections
for comma, flare, barrel and goodness knows what else.

So, Given two objectives of the same quality and correction, I would agree
with you, bigger NA means more potential resolving power up to the NA of
the substage condenser as limited by the refractive index of air. (Now
we're into oil immersion systems!) Remember we're are talking about an
optical system of condenser and objective.

I tell everyone about examining diatoms with two different objectives, one
from company N, the other from company Z (maybe 30 years ago). The two
objectives were the same magnification and had roughly the same NA, but
quality was significantly different. The Z objective made diatom structure
features jump out at me. With the N objective I could find the features
but I had to hunt for them.

There is more to examining images than resolving power.....

Frank Karl
Degussa Corporation
Akron Technical Center
3500 Embassy Parkway
Suite 100
Akron, Ohio 44333


330-668-2235 Ext. 238


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phillipst-at-missour
i.edu To: frank.karl-at-degussa.com
cc:
10/28/2005 09:23 Subject: [Microscopy] Re: LD vs 'regular' LM objectives
AM
Please respond to
phillipst








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The Microscopy ListServer -- CoSponsor: The Microscopy Society of America


The quality of the image and its ability to capture light (i.e., brightness

of fluorescence images) is determined by the numerical aperture (NA) and
the magnification of the objective. Long working distance objectives
generally have a lower NA so they produce lower resolution and less bright
fluorescent images than standard working distance objectives with similar
magnifications but higher NA's. For a given magnification, the higher the
NA, the brighter and sharper the image. For a given NA, the lower the
magnification, the brighter the image but I think you need to know the
actual NA and mag to predict the effect on resolution.

At 07:07 PM 10/27/05, you wrote:



} ----------------------------------------------------------------------------

} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

}
} Hi
}
} Anyone like to offer an opinion of the differences in image quality
between
} LD and standard objective lenses for light microscopy including
} fluorescence?
}
} We have a 'hybrid' scope, some LD, some standard objectives and are trying
} to decide which kind to add to go to make them all the same.
}
} Pretty general question, I know, but give it a shot if you have some
ideas.
}
} Thanks
}
} Jon
}
}
} Jonathan Krupp
} Microscopy & Imaging Lab
} C230 Earth & Marine Science
} University of California
} Santa Cruz, CA 95064
} (831) 459-2477
} jmkrupp-at-cats.ucsc.edu
}
}
}
} ==============================Original
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Thomas E. Phillips, PhD
Professor of Biological Sciences
Director, Molecular Cytology Core
2 Tucker Hall
University of Missouri
Columbia, MO 65211-7400

573-882-4712 (office)
573-882-0123 (fax)
PhillipsT-at-missouri.edu



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From: keith.morris-at-ucl.ac.uk
Date: Fri, 28 Oct 2005 10:39:05 -0500
Subject: [Microscopy] Fw: heating live cells

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Jon,

We only have one Zeiss 'air' LD plan neofluar - a 63x. However it's image
quality is noticeably poorer than our Zeiss oil immersion 63x Plan
Apochromat's, using confocal and standard fluorescence imaging
configurations. The LD objective was over £1,000 cheaper - we use it for
both epi-fluorescence and Ph transmission.

Our LD obviously scores if you want to image something 1mm into the sample
though owing to its very long working distance (WD 1.2 to 2.2 mm). In
comparison our Plan Apochromat high power oil objectives (WD = 0.19 mm) only
just get into the cells stuck onto the coverslip (e.g. using Mattek dishes)
and we can't see anything at all with a slightly raised coverslip on slides.

On our Leica SP2 AOBS confocal system, our 'blue' Leica 20x HCL PL APO
water/glycerol/oil objective has very good image quality and a slightly
bigger WD with water compared to oil immersion (free WD = 0.26 mm water or
0.17 mm oil). However water immersion is a pain with the inverted
microscopes we use.

Our local Zeiss rep is always happy to lend us objectives for appraisal,
which is extremely useful.

Regards

Keith

PS. Years ago at a meeting I heard that higher NA increases the resolution,
but lowering the NA (assuming you have a variable NA collar on your
objective) improves the contrast, which might be more useful in some cases.
It seems to work with the one variable NA objective we have.

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk


----- Original Message -----
X-from: {jmkrupp-at-cats.ucsc.edu}
To: {keith.morris-at-ucl.ac.uk}
Sent: Friday, October 28, 2005 1:11 AM

Hi Judy,

I use fixed temperature 'convection enclosure heaters' (see RSWWW link).
They are really designed for eliminating condensation in outside
enclosures, but they simply plug in and then go to a set surface
temperature with no thermostat control. They are designed to stay on
permanently and have overheat & thermal fuse protection etc..

I have two 30w enclosure heaters to supply additional heat inside a large
Perspex microscope incubator (similar to www.solent-scientific.co.uk ones).
They are fitted into little aluminium stands our workshop made for them.
With the thermostatically controlled 'air blower' off & the enclosure
heaters on, the incubator stays around 32oC ready to be quickly heated when
the Zeiss/PeCon CTI/3700 'air blow temp' controllers are switched on. I do
put bubble wrap on the back, sides and top of the incubator, to reduce heat
loss to the room.

See them at
http://www.rswww.com and search for item 224-492 .

They may suit. They are cheap and reasonably compact.

The 30W ones get to around 57oC surface temp when left on, and should be
placed a few cm's from cables etc... The stands we built for them also
shield the side surfaces from fingers as otherwise they are hot to touch
(the higher the wattage the hotter they get).

Regards

Keith

----------------------------------------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology Division
Institute of Ophthalmology
University College London
11-43 Bath Street
London EC1V 9EL

Tel: 020 7608 4050
Fax: 020 7608 4034
email: keith.morris-at-ucl.ac.uk


----- Original Message -----
} From: {TrogadisJ-at-smh.toronto.on.ca}
} To: {keith.morris-at-ucl.ac.uk}
} Sent: Thursday, October 27, 2005 10:16 PM
} Subject: [Microscopy] heating live cells
}
}
} }
} }
} }
} } ----------------------------------------------------------------------------
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} }
} } Fellow Microscopists
} }
} } We are looking for a device for maintaining a constant temperature
} } inside a plexiglass incubator which is installed around the stage of an
} } inverted microscope. Volume around 2 cu. ft.
} }
} } We now have an external heating unit with temperature control that
} } blows warm air into the incubator, however the air then flows out
} } through small openings and it is difficult to regulate the CO2 levels
} } because the air is constantly changing. Besides, the warm air results in
} } fluid evaporation.
} }
} } Ideally, I'm looking for a radiant source of heat to place inside the
} } incubator - no light bulbs, for obvious reasons. We do have a thermistor
} } to regulate the temperature into which the device could be plugged.
} }
} } Any suggestions?
} } Thank you
} } Judy
} }
} } Judy Trogadis
} } Bio-Imaging Coordinator
} } St. Michael's Hospital, 7Queen
} } 30 Bond St.
} } Toronto, ON M5B 1W8
} } Canada
} } ph: 416-864-6060 x6337
} } pager: 416-685-9219
} } fax: 416-864-6043
} } trogadisj-at-smh.toronto.on.ca
} }
} }
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From: nairvinods-at-gmail.com
Date: Fri, 28 Oct 2005 12:33:28 -0500
Subject: [Microscopy] Immuno TEM ....GFP

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hello Randy,
I am a grad student at NMSU and have been working some immunolabelling. We
are looking at localization of GFP labelled bacteria in squid tissue. So far
I have had luck immunolbelling GFP transformed bacteria with colloidal gold.
I am using LR white for embedding. I haven't encountered any problems thus
far with immunolabelling.
The only problem I have is that I have a huge tissue and I need to section
transversly thru the entire tissue. This leaves a lot of wrinkles behind
after the whole process of immunlabeling which does not look real good after
scanning the negatives. The sections are very thin to withstand stretching
using chloroform and other resins seem to affect immunolabelling.
This is where I could use some help.
Would it be ethical to try and iron out the wrinkles using any software.
I would greatly appreciate any suggestions and or solutions to iron out those
wrinkles. Unfortunately re embedding is not an option as we do not have any
more tissue.
Desperate to graduate :)
Vinod


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From: sghoshro-at-NMSU.Edu
Date: Fri, 28 Oct 2005 12:44:04 -0500
Subject: [Microscopy] Re: Immuno EM---GFP

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Randy,

A graduate student in the lab routinely uses gold conjugated anti-GFP secondary
antibody to label GFP in LR White embedded tissue. It is post section labeling
and works just fine. You can buy the secondary ab from I believe Jackson
Immunoresearch Lab.

Can you Fed Ex me some left overs from your dinner party?

Soumitra


Quoting TindallR-at-missouri.edu:

}
}
}
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} Dear Listers,
}
} I'm curious to see if anyone has any words of wisdom about
} immunostaining of GFP in general. I'd be interested in experiences
} relating to DAB-HRP labeling and/or immunogold, both pre- and
} post-embedding. Cryosections, too! (There, that ought to keep you
} busy.)
}
} More specifically, are there any danger spots in the fixation or
} embedding processes that could negatively affect the labeling process,
} or even destroy the protein itself?
}
} I know it's one of those overly broad questions, but I am mainly
} interested in how, if at all, labeling GFP might be different that
} labeling other proteins. I've not had much luck going through our
} library on finding GFP-specific material, and I'm still Googling away.
}
} By the way, you're all invited to dinner at my place tonight by way of
} thanks. My Honduran in-laws are in town and the food is good and
} plentiful and the music is Latin. Yes, people CAN cook and dance at the
} same time.
}
} Randy Tindall
} EM Specialist
} Electron Microscopy Core Facility---We Do Small Well!
} W122 Veterinary Medicine
} University of Missouri
} Columbia, MO 65211
} Tel: (573) 882-8304
} Fax: (573) 884-2227
} Email: tindallr-at-missouri.edu
} Web: http://www.emc.missouri.edu
}
}
}
}
}
}
}
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Soumitra Ghoshroy
College Associate Professor, Biology
Director, Electron Microscopy Lab
New Mexico State University
Las Cruces, NM 88003
Tel: 505-646-3268 (office)
505-646-3283 (lab)
Fax: 505-646-3282
http://biology-web.nmsu.edu/ghoshroy/ghoshroy.htm
http://emldata.nmsu.edu/eml

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From: opmills-at-mtu.edu
Date: Fri, 28 Oct 2005 14:16:22 -0500
Subject: [Microscopy] Magnetic card readers for instrument access

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi,

I've been alerted that funding may be available for the installation
of magnetic strip card readers to tracking instrument use in my
facility. Apparently they are being used successfully for this
purpose in a university micro-fabrication facility in our state. If
they work, perhaps it would simplify the accounting involved in
monthly invoicing. However, I have a couple of concerns about using
them in our facility that I can't work out. Maybe you can help.

Do you install the reader on the instrument itself, or on the doorway
of the lab. This is the standard way of installing readers at my
university. There is a problem when they are used on a lab door when
there are several instruments inside.

Can readers be interlocked into the instruments to prevent use until
a card is swiped? Has anyone done that? How?

If I use a swipe style reader, we could probably get compliance when
a user gets started. However, we'd have to get them to swipe again
at the end of their use to capture the elapsed time (which is what we
really want!). If they don't swipe again at the end of their
session, I'll have to spend more time determining how much time they
used.

Have any of you used a card reader like the ones on ATM machines that
actually "keep" your card until the transaction is completed? A
reader like this might solve the problem above.

There is a problem for automated instruments (like microprobes) where
a sample run may extend into the early morning hours. Since no one
will be there to swipe at the end, how could we accurately track use
in those situations?

I appreciate any input you can offer. Thanks!

Owen

Owen P. Mills
Director, Materials Characterization and Fabrication Facilities
Electron Optics Engineer,
Applied Chemical & Morphological Analysis Laboratory
Materials Science & Engineering
Michigan Technological University
Rm 512 M&M Bldg.
Houghton, MI 49931
PH 906-369-1875
FAX 906-487-2934
mailto:opmills-at-mtu.edu
http://www.mm.mtu.edu/~opmills




Owen P. Mills
Director, Materials Characterization and Fabrication Facilities
Electron Optics Engineer,
Applied Chemical & Morphological Analysis Laboratory
Materials Science & Engineering
Michigan Technological University
Rm 512 M&M Bldg.
Houghton, MI 49931
PH 906-369-1875
FAX 906-487-2934
mailto:opmills-at-mtu.edu
http://www.mm.mtu.edu/~opmills




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From: gcc-at-couger.com
Date: Fri, 28 Oct 2005 14:20:37 -0500
Subject: [Microscopy] heating live cells

Contents Retrieved from Microscopy Listserver Archives
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} Fellow Microscopists
}
} We are looking for a device for maintaining a constant temperature
} inside a plexiglass incubator which is installed around the stage of an
} inverted microscope. Volume around 2 cu. ft.
}
} We now have an external heating unit with temperature control that
} blows warm air into the incubator, however the air then flows out
} through small openings and it is difficult to regulate the CO2 levels
} because the air is constantly changing. Besides, the warm air results in
} fluid evaporation.
}
} Ideally, I'm looking for a radiant source of heat to place inside the
} incubator - no light bulbs, for obvious reasons. We do have a thermistor
} to regulate the temperature into which the device could be plugged.
}
} Any suggestions?
} Thank you
} Judy
}
} Judy Trogadis

Hi Judy,

If you need an out of the box solution a look for PID temperature control
such as http://www.watlow.com/products/controllers/ and for that small
chamber I would use several Caddock resistors
http://www.caddock.com/Online_catalog/current_sense/current_sense.html
over the bottom to evenly contort the heat using a 6 or 12 volt
transformer that you should have laying around.---

For more complex solutions here are some options.

I help an entomologist solve the CO2 problem in moving air as show in
Perritt,D.W., Baker, R.R., Couger, G.
Computer lactometer system for studying behavioral responses of ticks to
carbon dioxide.
Journal of medical entomology. (ABBREV TITLE = J Med Entomol) May 1993. v.
30 (3)

I believe the specifics on how to build the apparatus and computer
program are in the paper. If the particulars an the apparatus aren't in
the paper it requires a dual stage regulator for the CO2, $25 dollar 12
volt solenoid valve and a one dollar FET and uses a printer port of MS DOS
computer to run it. It is an open loop system that is set by trial and
error but it can set the CO2 concentration in air very closely..

I would have made a more outburst solution but it was done for another
department and they needed a quick fix and my boss was on my bake about
helping others outside the department.

Depending on what kind or computer programing resources you have
available. On the crude end a light Bulb and a very small fan blowing over
it does a very good job raising the temperature above the ambient
temperature with very little over shoot if the bulb is sized right. The
fan needs to come on with the light bulb and stay on until it is cooled
down to near the temperature of the chamber. I have used power resistors
such as these
http://www.caddock.com/Online_catalog/current_sense/current_sense.html as
heater as well and you can get them in any power dissipation rang and wide
range of resistance to use any voltage to make a heater.

If you have no low level computer programming experience available the
Tiny 2131 and Plug-in-Bord from http://www.newmicros.com/ using FORT is as
easy to get started with as any and they have enough example program to
almost make it work.

FORTH is difficult language for big projects but with everything being on
board and always ready to go it is very nice for small ones.

I have held the temperature of 1.5 cubic foot box with in 2 degrees with
the logic of if the temperature is over 150f turn it off and let the fan
run for one minute if the temperature is below 149 turn on the light and
wait 10 seconds to turn on the fan. Each of 8 faces of the box had
different insulation.

If you need an out of the box solution a look for PID temperature control
such as http://www.watlow.com/products/controllers/ and for that small
chamber I would use several Caddock resistors
http://www.caddock.com/Online_catalog/current_sense/current_sense.html
over the bottom to evenly control the heat using a 6 or 12 volt
transformer that you should have laying around from the old days.

Gordon
Gordon Couger

I collect links on information related to light microscopes.
www.couger.com/microscope/links/gclinks.html
Please forward anything you think might be useful to others.
Microscope Documentation is at www.science-info.org


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19, 21 -- Subject: Re: [Microscopy] RE: heating live cells
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From: phillipst-at-missouri.edu
Date: Fri, 28 Oct 2005 14:51:03 -0500
Subject: [Microscopy] LD vs 'regular' LM objectives

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Indeed, I agree with all of Frank's comments. My earlier answer was too
short and Frank addressed several issues I didn't mention. Furthermore,
when discussing fluorescence, one has to worry about how well they transmit
the wavelength one is interested in. For example, a highly corrected
objective may have too much glass or the wrong type of glass to adequately
pass UV wavelengths. The ability to pass NIR wavelengths is important in
selecting objectives for multiphoton confocal. I also fully agree that
objective quality can vary between manufacturers but a comparison between
brands N and Z 30 years ago is not especially germane anymore since all the
major manufacturers have really changed how they make their objectives in
the last 30 years.

At 09:21 AM 10/28/05, you wrote:




} I don't want to start a flame war, I don't wish to lose my access to this
} list server......
}
} Your statement is only part of the story. Image quality is also affected
} by the degree of correction built into the objective. An achromatic
} objective may have corrections for one color spherical aberration and two
} colors chromatic aberration. An apochromatic would have corrections for
} two color spherical aberration and three colors chromatic aberration. I
} will not even attempt to fit in flat fields, fluorites, semifluorites and
} the old fashion gem lens. With that we still have a series of corrections
} for comma, flare, barrel and goodness knows what else.
}
} So, Given two objectives of the same quality and correction, I would agree
} with you, bigger NA means more potential resolving power up to the NA of
} the substage condenser as limited by the refractive index of air. (Now
} we're into oil immersion systems!) Remember we're are talking about an
} optical system of condenser and objective.
}
} I tell everyone about examining diatoms with two different objectives, one
} from company N, the other from company Z (maybe 30 years ago). The two
} objectives were the same magnification and had roughly the same NA, but
} quality was significantly different. The Z objective made diatom structure
} features jump out at me. With the N objective I could find the features
} but I had to hunt for them.
}
} There is more to examining images than resolving power.....
}
} Frank Karl
} Degussa Corporation
} Akron Technical Center
} 3500 Embassy Parkway
} Suite 100
} Akron, Ohio 44333
}
}
} 330-668-2235 Ext. 238
}
}
} This e-mail transmission, and any documents, files or previous e-mail
} messages attached to it may contain information that is confidential or
} legally privileged. If you are not the intended recipient, or a person
} responsible for delivering it to the intended recipient, you are hereby
} notified that you must not read this transmission and that any disclosure,
} copying, printing, distribution or use of any of the information contained
} in or attached to this transmission is STRICTLY PROHIBITED. If you have
} received this transmission in error, please immediately notify the sender
} by telephone or return e-mail and delete the original transmission and its
} attachments without reading or saving in any manner. Thank you.
}
}
}
}
} phillipst-at-missour
}
} i.edu To:
} frank.karl-at-degussa.com
} cc:
}
} 10/28/2005 09:23 Subject: [Microscopy] Re:
} LD vs 'regular' LM objectives
} AM
}
} Please respond
} to
}
} phillipst
}
}
}
}
}
}
}
}
}
}
} ----------------------------------------------------------------------------
}
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

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Professor of Biological Sciences
Director, Molecular Cytology Core
2 Tucker Hall
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Columbia, MO 65211-7400

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PhillipsT-at-missouri.edu



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From: TrogadisJ-at-smh.toronto.on.ca
Date: Fri, 28 Oct 2005 15:03:08 -0500
Subject: [Microscopy] live cell heating device

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

To the wonderful Microscopy Listserv:

Thank you for the many useful replies with suggestions on regulating
the temperature in our incubator. Of course, off-the-shelf products are
great, however, it was astonishing yet reassuring to know that
individuals are still willing to spend the time to create novel ways of
achieving the same results.

Gratefully yours,
Judy

Judy Trogadis
Bio-Imaging Coordinator
St. Michael's Hospital, 7Queen
30 Bond St.
Toronto, ON M5B 1W8
Canada
ph: 416-864-6060 x6337


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From: David.Griffiths-at-veths.no
Date: Fri, 28 Oct 2005 16:33:18 -0500
Subject: [Microscopy] LM_Microtomes_HPMA_Methacrylates_Recommendations

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


Dear Listmembers,
I need to order a new microtome primarily for sectioning methacrylate-embedded tissue for light microscopy. The choice will probably be between the Microm HM-355C and an RMC MT-990, with possibly a Leica RM2255 also being a candidate. I know almost nothing about the Microm, and absolutely nothing about the RMC. If any of you have used either of these products or have any firm opinions of them I would really like to hear from you. This probably isn't of great interest to most people, so perhaps offline to me at david.griffiths-at-veths.no is best.

Thankyou,
David Griffiths

David Griffiths
Section of Anatomy and Pathology
Norwegian School of Veterinary Science
P. O. Box 8146 Dep
N-0033 Oslo
Norway
E-mail: david.griffiths-at-veths.no

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9, 23 -- From David.Griffiths-at-veths.no Fri Oct 28 16:33:18 2005
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From: jmastrangelo-at-ulbi.com
Date: Fri, 28 Oct 2005 17:45:22 -0500
Subject: [Microscopy] viaWWW: Mn / F analysis with EDS

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (jmastrangelo-at-ulbi.com) from http://www.microscopy.com/MLFormMail.html on Friday, October 28, 2005 at 08:54:33
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Email: jmastrangelo-at-ulbi.com
Name: Joseph Mastrangelo

Organization: Ultralife Batteries

Title-Subject: [Filtered] Mn / F resolution with EDS

Question: Good morning everyone,

We have recently purchased an SEM/EDS system for the purpose of materials qualification. The system seems to be working fine, but we are having some difficulty when attempting to analyze fluorine in samples that contain high amounts of manganese. We assume this difficulty is due to the ROI overlap for Mn and F. We do realize that the EDS system is semi-quantitative at best, but the overlap seems to be causing the Fluorine content to be magnified by a factor of 3 or 4 in the analysis. Just wondering if anyone out there has had any similar experiences, and whether there are any "tricks of the trade" for dealing with this.

Thanks in advance for your input,

Joe Mastrangelo
Chemical Lab Technician
Ultralife Batteries
Newark, NY
jmastrangelo-at-ulbi.com

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9, 12 -- From zaluzec-at-microscopy.com Fri Oct 28 17:45:22 2005
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From: gcc-at-couger.com
Date: Fri, 28 Oct 2005 21:26:52 -0500
Subject: [Microscopy] Re: Magnetic card readers for instrument access

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Owen,

To get that level of compliance you would have to implant RFID chips in
the users hands and only activate the scope when it senses and ID tag in
the area and register the user.

You should be able to get a satisfactory level of compliance from
professionals and student with an ID chip in a bracelet, ring. watch band,
active ID badge or card in a passive system. The RFID sensor registers,
records and turns on the instrument if the user has privileges for it from
who ever's RFID is in the capture area of the scope. Here is one example I
found with Google search "RFID card" SDK
http://www.geometrix.com/solutions/access.html

Be careful in this area you are very close to the system being put in
track cattle from conception to the fork so be careful how you present the
idea on bad joke can send it down the tubes.


I expect the RFID solution would be more expensive than the card swipe but
the RFID should work almost every time logging users out and catching the
change of users with in a few minuets of the actual change. I expect you
will be lucky to get 40% log off compliance with a card swipe. I know I
would forget a good part of the time.

I am an inactive part owner of a company that develops this kind of
solution as well as microscope hobbyist. We have done work in this area
but have not done any projects.

Gordon Couger
DataLink Systems
www.rfdata.net




opmills-at-mtu.edu wrote:

}
} Hi,
}
} I've been alerted that funding may be available for the installation
} of magnetic strip card readers to tracking instrument use in my
} facility. Apparently they are being used successfully for this
} purpose in a university micro-fabrication facility in our state. If
} they work, perhaps it would simplify the accounting involved in
} monthly invoicing. However, I have a couple of concerns about using
} them in our facility that I can't work out. Maybe you can help.
}
} Do you install the reader on the instrument itself, or on the doorway
} of the lab. This is the standard way of installing readers at my
} university. There is a problem when they are used on a lab door when
} there are several instruments inside.
}
} Can readers be interlocked into the instruments to prevent use until
} a card is swiped? Has anyone done that? How?
}
} If I use a swipe style reader, we could probably get compliance when
} a user gets started. However, we'd have to get them to swipe again
} at the end of their use to capture the elapsed time (which is what we
} really want!). If they don't swipe again at the end of their
} session, I'll have to spend more time determining how much time they
} used.
}
} Have any of you used a card reader like the ones on ATM machines that
} actually "keep" your card until the transaction is completed? A
} reader like this might solve the problem above.
}
} There is a problem for automated instruments (like microprobes) where
} a sample run may extend into the early morning hours. Since no one
} will be there to swipe at the end, how could we accurately track use
} in those situations?
}
} I appreciate any input you can offer. Thanks!
}
} Owen
}
} Owen P. Mills
} Director, Materials Characterization and Fabrication Facilities
} Electron Optics Engineer,
} Applied Chemical & Morphological Analysis Laboratory
} Materials Science & Engineering
} Michigan Technological University
} Rm 512 M&M Bldg.
} Houghton, MI 49931
} PH 906-369-1875
} FAX 906-487-2934
} mailto:opmills-at-mtu.edu
} http://www.mm.mtu.edu/~opmills
}
}
}
}
} Owen P. Mills
} Director, Materials Characterization and Fabrication Facilities
} Electron Optics Engineer,
} Applied Chemical & Morphological Analysis Laboratory
} Materials Science & Engineering
} Michigan Technological University
} Rm 512 M&M Bldg.
} Houghton, MI 49931
} PH 906-369-1875
} FAX 906-487-2934
} mailto:opmills-at-mtu.edu
} http://www.mm.mtu.edu/~opmills
}

}


==============================Original Headers==============================
15, 21 -- From gcc-at-couger.com Fri Oct 28 21:26:52 2005
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15, 21 -- Message-ID: {4362DDEA.2000200-at-couger.com}
15, 21 -- Date: Fri, 28 Oct 2005 21:26:50 -0500
15, 21 -- From: Gordon Couger {gcc-at-couger.com}
15, 21 -- User-Agent: Mozilla Thunderbird 1.0.6 (Windows/20050716)
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15, 21 -- To: opmills-at-mtu.edu,
15, 21 -- "microscopy-at-msa.microscopy.com" {microscopy-at-msa.microscopy.com}
15, 21 -- Subject: Re: [Microscopy] Magnetic card readers for instrument access
15, 21 -- References: {200510281920.j9SJKCoh002237-at-ns.microscopy.com}
15, 21 -- In-Reply-To: {200510281920.j9SJKCoh002237-at-ns.microscopy.com}
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From: gcc-at-couger.com
Date: Sat, 29 Oct 2005 00:40:24 -0500
Subject: [Microscopy] LD vs 'regular' LM objectives

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


} Hi Jon,
}
} We only have one Zeiss 'air' LD plan neofluar - a 63x. However it's image
} quality is noticeably poorer than our Zeiss oil immersion 63x Plan
} Apochromat's, using confocal and standard fluorescence imaging
} configurations. The LD objective was over £1,000 cheaper - we use it for
} both epi-fluorescence and Ph transmission.
}
} Our LD obviously scores if you want to image something 1mm into the sample
} though owing to its very long working distance (WD 1.2 to 2.2 mm). In
} comparison our Plan Apochromat high power oil objectives (WD = 0.19 mm)
only
} just get into the cells stuck onto the coverslip (e.g. using Mattek
dishes)
} and we can't see anything at all with a slightly raised coverslip on
slides.
}
} On our Leica SP2 AOBS confocal system, our 'blue' Leica 20x HCL PL APO
} water/glycerol/oil objective has very good image quality and a slightly
} bigger WD with water compared to oil immersion (free WD = 0.26 mm water or
} 0.17 mm oil). However water immersion is a pain with the inverted
} microscopes we use.
}
} Our local Zeiss rep is always happy to lend us objectives for appraisal,
} which is extremely useful.
}
} Regards
}
} Keith
}
} PS. Years ago at a meeting I heard that higher NA increases the
resolution,
} but lowering the NA (assuming you have a variable NA collar on your
} objective) improves the contrast, which might be more useful in some
cases.
} It seems to work with the one variable NA objective we have.
}
Keith,

Your pretty much right but the n.a. included the coder and the lower the
n.a. the larger the depth of field. In my mind I believe that is stating
the same thing in two different ways. But its ben 44 years since I had
physics.

I have a Leitz 63x .83 n.a. with a variable aperture it is the companion
to their dry dark field condensers and everything you say about the effect
of n.a. is pretty much on the money. The iris can be closed to the point
on the Leitz 63x that n.a. is so small that the image degradation due to
detraction on the edge of the blades of the iris is noticeable.

Gordon
Gordon Couger

I collect links on information related to light microscopes.
www.couger.com/microscope/links/gclinks.html
Please forward anything you think might be useful to others.
Microscope Documentation is at www.science-info.org





==============================Original Headers==============================
10, 22 -- From gcc-at-couger.com Sat Oct 29 00:40:24 2005
10, 22 -- Received: from centrmmtao06.cox.net (centrmmtao06.cox.net [70.168.83.78])
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10, 22 -- Sat, 29 Oct 2005 01:39:41 -0400
10, 22 -- Message-ID: {43630B4A.4040500-at-couger.com}
10, 22 -- Date: Sat, 29 Oct 2005 00:40:26 -0500
10, 22 -- From: Gordon Couger {gcc-at-couger.com}
10, 22 -- User-Agent: Mozilla Thunderbird 1.0.6 (Windows/20050716)
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10, 22 -- "microscopy-at-msa.microscopy.com" {microscopy-at-msa.microscopy.com}
10, 22 -- Subject: Re: [Microscopy] Re: LD vs 'regular' LM objectives
10, 22 -- References: {200510281454.j9SEsPQH028772-at-ns.microscopy.com}
10, 22 -- In-Reply-To: {200510281454.j9SEsPQH028772-at-ns.microscopy.com}
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From: Rosemary.White-at-csiro.au
Date: Sat, 29 Oct 2005 02:25:16 -0500
Subject: [Microscopy] Re: LD vs 'regular' LM objectives

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Keith et al.,

We have 4 dipping objectives (no coverslip needed) with about 2 mm WD, as
well as high NA, short WD water immersion objectives. We use the dipping
objectives on the upright microscope when we need to do microinjection or
change incubation solution or look at large, odd-shaped specimens, etc. I
am impressed at how good they are. The 63x dipping objective, with NA 0.9,
is very bright (for fluorescence) and quite good resolution, though you can
clearly see the superior resolution and brightness of the NA 1.2 water
immersion objective. Since the latter cost about twice as much as the
former, you'd want to see a difference in performance.....

Rosemary

Rosemary White rosemary.white-at-csiro.au
CSIRO Plant Industry ph. 02-6246 5475
GPO Box 1600 mob. 0402 835 973
Canberra, ACT 2601 fax. 02-6246 5334
Australia


} From: gcc-at-couger.com
} Reply-To: gcc-at-couger.com
} Date: Sat, 29 Oct 2005 00:44:29 -0500
} To: rosemary.white-at-csiro.au
} Subject: [Microscopy] LD vs 'regular' LM objectives
}
}
}
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
}
} } Hi Jon,
} }
} } We only have one Zeiss 'air' LD plan neofluar - a 63x. However it's image
} } quality is noticeably poorer than our Zeiss oil immersion 63x Plan
} } Apochromat's, using confocal and standard fluorescence imaging
} } configurations. The LD objective was over £1,000 cheaper - we use it for
} } both epi-fluorescence and Ph transmission.
} }
} } Our LD obviously scores if you want to image something 1mm into the sample
} } though owing to its very long working distance (WD 1.2 to 2.2 mm). In
} } comparison our Plan Apochromat high power oil objectives (WD = 0.19 mm)
} only
} } just get into the cells stuck onto the coverslip (e.g. using Mattek
} dishes)
} } and we can't see anything at all with a slightly raised coverslip on
} slides.
} }
} } On our Leica SP2 AOBS confocal system, our 'blue' Leica 20x HCL PL APO
} } water/glycerol/oil objective has very good image quality and a slightly
} } bigger WD with water compared to oil immersion (free WD = 0.26 mm water or
} } 0.17 mm oil). However water immersion is a pain with the inverted
} } microscopes we use.
} }
} } Our local Zeiss rep is always happy to lend us objectives for appraisal,
} } which is extremely useful.
} }
} } Regards
} }
} } Keith
} }
} } PS. Years ago at a meeting I heard that higher NA increases the
} resolution,
} } but lowering the NA (assuming you have a variable NA collar on your
} } objective) improves the contrast, which might be more useful in some
} cases.
} } It seems to work with the one variable NA objective we have.
} }
} Keith,
}
} Your pretty much right but the n.a. included the coder and the lower the
} n.a. the larger the depth of field. In my mind I believe that is stating
} the same thing in two different ways. But its ben 44 years since I had
} physics.
}
} I have a Leitz 63x .83 n.a. with a variable aperture it is the companion
} to their dry dark field condensers and everything you say about the effect
} of n.a. is pretty much on the money. The iris can be closed to the point
} on the Leitz 63x that n.a. is so small that the image degradation due to
} detraction on the edge of the blades of the iris is noticeable.
}
} Gordon
} Gordon Couger
}
} I collect links on information related to light microscopes.
} www.couger.com/microscope/links/gclinks.html
} Please forward anything you think might be useful to others.
} Microscope Documentation is at www.science-info.org
}
}
}
}
}
} ==============================Original Headers==============================
} 10, 22 -- From gcc-at-couger.com Sat Oct 29 00:40:24 2005
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} [70.168.83.78])
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} -0500
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} centrmmtao06.cox.net
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} ESMTP
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} {20051029053941.DKQZ24602.centrmmtao06.cox.net-at-[127.0.0.1]} ;
} 10, 22 -- Sat, 29 Oct 2005 01:39:41 -0400
} 10, 22 -- Message-ID: {43630B4A.4040500-at-couger.com}
} 10, 22 -- Date: Sat, 29 Oct 2005 00:40:26 -0500
} 10, 22 -- From: Gordon Couger {gcc-at-couger.com}
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} 10, 22 -- "microscopy-at-msa.microscopy.com"
} {microscopy-at-msa.microscopy.com}
} 10, 22 -- Subject: Re: [Microscopy] Re: LD vs 'regular' LM objectives
} 10, 22 -- References: {200510281454.j9SEsPQH028772-at-ns.microscopy.com}
} 10, 22 -- In-Reply-To: {200510281454.j9SEsPQH028772-at-ns.microscopy.com}
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}


==============================Original Headers==============================
7, 22 -- From Rosemary.White-at-csiro.au Sat Oct 29 02:25:15 2005
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7, 22 -- Subject: Re: [Microscopy] LD vs 'regular' LM objectives
7, 22 -- From: Rosemary White {Rosemary.White-at-csiro.au}
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From: zaluzec-at-microscopy.com
Date: Sat, 29 Oct 2005 12:19:18 -0500
Subject: [Microscopy] Microscopy & Microanalysis 2006

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Colleagues

The WWW site for the Microscopy & Microanalysis 2006 Meeting
in Chicago July 30-August 3 has been recently updated with the
full meeting details.

http://mm2006.microscopy.org

Please feel free to visit this site at your convenience
and to share this information with colleagues and students who may not
be members of this Listserver community.

While a few of the on-line registration/submission pages are still in the
process of being established, the all of the information concerning the meeting
as well as Pre-Meeting Congress and Sunday Short Courses is now
on-line.

A hard copy of the Call for Papers is currently in press and will be mailed shortly to
all sponsoring society members as well as recent meeting participants.

Hope to see you (all) in Chicago, as by some strange coincidence it appears I will
also be there.

Nestor J. Zaluzec
Your Friendly Neighborhood SysOp
&
MM2006 Local Arrangement Committee Co-Chair


==============================Original Headers==============================
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9, 11 -- From: "Nestor J. Zaluzec" {zaluzec-at-microscopy.com}
9, 11 -- Subject: Microscopy & Microanalysis 2006
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From: eggert-at-mikroanalytik.de
Date: Mon, 31 Oct 2005 00:24:09 -0600
Subject: [Microscopy] Re: viaWWW: Mn / F analysis with EDS

Contents Retrieved from Microscopy Listserver Archives
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Dear Joe,

the overlap of F between several Mn-L lines is very strong and a real
challenge for each deconvolution procedure. The deconvolution software
must know all line positions very well and the distortions of lines
(detector dependance). But the major problem is not to deconvolute the
net count rates of all lines in this spectra region, but the strong
absorption of F in Manganese due to the Mn-L3 and L2 absorption jumps.
This should be the main problem for quantitative analysis, not only for
an EDS.

Look to some numbers: If the F is emitted in 0.1 micron depth of
specimen, only about 19 per cent of X-rays of 677 eV (F-Ka) are able to
leave the specimen (the opposite is absorbed). Nothing is coming from
0.3 micron depth. Only a little change in energy to a lower X-ray energy
(630 eV) and 55% are coming out from 0.3 micron and 82 per cent from 0.1.

This is the real problem, your quantitative software is faced to. The
absorption is extremly strong. Therefore the errors and fluctuations you
must expect in quantitative results are much higher than with other
analytical situations. Finally the absolute deviations of your results
depends of the mass absorption coefficients your software is using.
These coefficients are badly well-known around absorption edges and
still more badly in low energy regions (below 1 keV). If your system
magnify the Fluorine content with factor 3..4 with samples of high
Manganese contents, the mass absorption coefficient of F in Mn must be
simply too high. But take in mind, the results fluctuations you have to
expect are still present, even if you will able to adjust the
coefficient (due to the always strong absorption).

You can have a look to the line energies, absorption jumps, mass
absorption coefficients (MAC's) and the absorption of X-rays in a given
layer with MA-Table program:

http://www.microanalyst.net/registr.phtml and
http://www.microanalyst.net/manual.html

Best regards

Frank Eggert

jmastrangelo-at-ulbi.com wrote:

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11, 19 -- From: Frank Eggert {eggert-at-mikroanalytik.de}
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From: marko-at-wadsworth.org
Date: Mon, 31 Oct 2005 09:38:06 -0600
Subject: [Microscopy] Invitation to organize symposia for M&M2007

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

We are looking for some great ideas for symposia at M&M2007!

Microscopy & Microanalysis 2007 Meeting

August 6-9, 2007
Broward County Convention Center
Ft. Lauderdale, Florida

Co-sponsored by

The Microscopy Society of America
The Microbeam Analysis Society
The International Metallographic Society

Although we have suggestions for some of the customary symposia, and have
already signed on a small number of organizers, the program is largely open
at this time.

We would like the majority of the proposals to be submitted by the end of
the year. We will start sending out acceptance letters in late December,
and by mid-February we expect the program to be mostly filled.

This timetable is considerably accelerated in comparison with previous
years, and we now require a description of 150-300 words for each proposed
symposia. The description should take the form of those found in the Call
for Papers and Expo of past years; it should be an announcement of the
symposium and an invitation for contributions. The Program Committee will
select symposia based on these descriptions, so that overlap will be
minimized and symposia will complement each other to form a coherent
overall program.

You need not be a member of MSA, MAS, or IMS to propose a symposium,
although we hope that your experience with the M&M meeting will encourage
you to join.

Please send your suggestion (complete with description) directly to the
Program Chair, or to the M&M2007 Co-Chair of your Society.

The M&M2007 website is

http://mm2007.microscopy.org/

The site can be reached by many right now, and contains the same
information as in this email. It will be available to all by the end of
next week. Near the end of the year, accepted symposia will be posted on
the website.

Program contacts:

Mike Marko, Program Chair (marko-at-wadsworth.org)
John Henry Scott, Vice Program Chair (johnhenry.scott-at-nist.gov)
Ed Vincenzi, MAS Program Co-Chair (vicenzi-at-volcano.si.edu)
Steve Dekanich, IMS Program Co-Chair (dekanichsj-at-y12.doe.gov)

Local Arrangments contact:

Lucille Gianuzzi, Local Arrangements Chair (lgiannuzzi-at-feico.com)

Meeting Management contact:

Phillip Ridley, Conference Manager
Bostrom Corp
230 East Ohio, Suite 400
Chicago, IL 60611
Tel: 312-644-0828
Fax: 312-644-8557
Email: pridley-at-bostrom.com





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From: KOCHINST-at-GLOBO.COM
Date: Mon, 31 Oct 2005 20:43:41 -0600
Subject: [Microscopy] viaWWW: first freezing microtome

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This Question was submitted to the Microscopy Listserver
using the WWW based Form at http://microscopy.com/MicroscopyListserver/MLFormMail.html
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Email: KOCHINST-at-GLOBO.COM
Name: ROBERT KOCH

Organization: KOCH INSTRUMENTOS CIENTÕFICOS LTDA.

Title-Subject: [Filtered] MListserver:

Question: Dear Microscopists,

we would like to know, if someone has information about the
very first freezing microtome.

Thank you

Robert Koch

Koch instrumentos CientÌficos Ltda.
Rua Joaquim Nabuco, 655 S“o Paulo - SP - Brazil
55-11-5092-4622 tel/fax
kochinst-at-globo.com
www.kochinst.com.br

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