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From: vladislav_speransky-at-nih.gov
Date: Thu, 1 Mar 2007 10:17:20 -0600
Subject: [Microscopy] opinions wanted on lab refrigerator

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Thanks to Roger, Steve Chapman and Bill Tivol for your replies - I do
seem to remember knowing at one time that the objective and selected
area apertures did opposite things when the objective lens is turned
off, but it has been a while..
I did find I can get strong contrast in low mag (LM) mode using the SA
aperture and have an acceptable field of view, although I couldn't get
dislocations to be visible at 1000x in LM mode when they are blindingly
obvious in standard mode at 2000x. Also a very significant increase in
brightness if I turn C1 down below it's normal minimum using free lens
control. Unfortunately, to see the dislocations I have to have a small
aperture in the diffraction plane, so it's no use using larger
apertures. So some more experimentation is needed, if I do get a good
setup usilg FLC I'm happy to pass the information on to anyone else who
finds they have the same problem.

Richard

________________________________________
Richard Beanland
Materials Analysis
Bookham
Caswell
Towcester
Northants
NN12 8EQ
United Kingdom
Tel. +44 1327 356362
Fax. +44 1327 356775
http://www.bookham.com
________________________________________


-----Original Message-----
X-from: Roger Ristau [mailto:raristau-at-ims.uconn.edu]
Sent: 28 February 2007 16:37
To: Richard Beanland

Dear all,

Can anybody share their recent experience buying a new lab
refrigerator? One of ours, a rather old machine, just broke, and we
started looking up in the catalogs, so many choices there...
Maybe someone has recently done the research and would be willing to
share? I would appreciate specific comments.

This fridge is to be used for storing EM-related stuff, including
antibodies, in the fridge and in the freezer compartment. I do
realize, that people often want to avoid the models with auto
defrost, because those actually warm up for some periods. But I used
to think that putting the vials/tubes into one of those special
Nalgene containers would protect the stuff from melting? Is that
really true? Because if it is true, then it seems more convenient to
get an auto one. Any experience on that?

Thanks!
Vlad


________________________________________________
Vlad Speransky, Staff Scientist
Supramolecular Structure and Function Resource
DBEPS/ORS, National Institutes of Health
13 South Dr, Rm. 3N17 MSC 5766
Bethesda, MD 20892
301 496-3989
vladislav_speransky-at-nih.gov


==============================Original Headers==============================
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7, 22 -- From: Vlad Speransky {vladislav_speransky-at-nih.gov}
7, 22 -- Subject: opinions wanted on lab refrigerator
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From: rcmoretz-at-gmail.com
Date: Thu, 1 Mar 2007 10:49:49 -0600
Subject: [Microscopy] Re: opinions wanted on lab refrigerator

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Vladislav:

You do not want a standard refrigerator. It has to be explosion
proof, which automatically rules out auto defrost. And no, the Nalge
containers do not protect against the freeze/thaw cycle--particularly
bad if you are storing any biologicals.
One question--what temperature do you want/need your freezer to be?
-10C? -20C? We just recently got a Barnstead with the -20C freezer.
I think it's a monster, but it wasn't my decision.... There has been
a long discussion about the negatives for auto defrost freezers on the
histonet listserve. Google the listserve and search the archives. It
was a lively and thorough discussion.

Roger Moretz, Ph.D.
Dept of Toxicology
Boehringer Ingelheim Pharmaceuticals
Ridgefield, CT

On 3/1/07, vladislav_speransky-at-nih.gov {vladislav_speransky-at-nih.gov} wrote:
}
}
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
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} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
} Dear all,
}
} Can anybody share their recent experience buying a new lab
} refrigerator? One of ours, a rather old machine, just broke, and we
} started looking up in the catalogs, so many choices there...
} Maybe someone has recently done the research and would be willing to
} share? I would appreciate specific comments.
}
} This fridge is to be used for storing EM-related stuff, including
} antibodies, in the fridge and in the freezer compartment. I do
} realize, that people often want to avoid the models with auto
} defrost, because those actually warm up for some periods. But I used
} to think that putting the vials/tubes into one of those special
} Nalgene containers would protect the stuff from melting? Is that
} really true? Because if it is true, then it seems more convenient to
} get an auto one. Any experience on that?
}
} Thanks!
} Vlad
}
}
} ________________________________________________
} Vlad Speransky, Staff Scientist
} Supramolecular Structure and Function Resource
} DBEPS/ORS, National Institutes of Health
} 13 South Dr, Rm. 3N17 MSC 5766
} Bethesda, MD 20892
} 301 496-3989
} vladislav_speransky-at-nih.gov
}
}
} ==============================Original Headers==============================
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} 7, 22 -- Subject: opinions wanted on lab refrigerator
} 7, 22 -- Date: Thu, 1 Mar 2007 11:15:52 -0500
} 7, 22 -- X-Mailer: Apple Mail (2.752.2)
} ==============================End of - Headers==============================
}

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From: dennis1231-at-yahoo.com
Date: Thu, 1 Mar 2007 11:00:04 -0600
Subject: [Microscopy] viaWWW: immunoEM antibody

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Email: dennis1231-at-yahoo.com
Name: Dennis McDaniel

Title-Subject: [Filtered] immunoEM antibody

Question: Hello,

I am doing some immunoEM work for another researcher, and so far none
of the antibodies we have tried have been successful. The researcher
would simply like to see the correct immunolocalization of anything
in order to validate the fixation and labeling methods we are using.

I am in search of a commercially available antibody suitable for
immunoEM in cells/tissues that have been fixed in 4%
formaldehyde/0.5% glutaraldehyde. Ideally, the antibody would raised
against an epitope that is present in most or all sections of most
cells and that is localized to structures that may be easily
discerned in cells that have not undergone optimal fixation (i.e. no
OsO4 post-fix). I am thinking of something like an antibody to a
mitochodrial or nuclear component. While I realize that no antibody
will work in all cells, I was hoping someone may know of an antibody
to a highly conserved protein that has worked in several different
cell types.

Any suggestions?


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From: phillipst-at-missouri.edu
Date: Thu, 1 Mar 2007 12:14:31 -0600
Subject: [Microscopy] Re: viaWWW: immunoEM antibody

Contents Retrieved from Microscopy Listserver Archives
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First you should realize getting one antibody to work on a tissue fixed and
embedded in a particular manner doesn't mean other antibodies will work in
a similar fashion. Second, you fail to mention what species and tissue you
are working on which makes suggestions of an antibody difficult. It is
often easiest to look for a Medline or PubMed search of your tissue and
species to see what antibodies have worked in EM immuno studies. Sometimes
I just search the Journal of Histochemistry & Cytochemistry for a
particular tissue since most of their papers do either LM or EM
immuno. good luck.



At 11:00 AM 03/01/07, you wrote:



} ----------------------------------------------------------------------------
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Thomas E. Phillips, PhD
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From: PWebster-at-hei.org
Date: Thu, 1 Mar 2007 12:29:37 -0600
Subject: [Microscopy] Re: viaWWW: immunoEM antibody

Contents Retrieved from Microscopy Listserver Archives
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Dear Dennis,

To assist you we really need more information. How are you attempting to
perform the immunolabeling? Are you applying the antibodies to
resin-embedded sections, cryosections or are you performing a pre-embedding
protocol?

When you say that the labeling you are doing doesn't work, do you mean that
the antibody is not labeling at all, is there too much label, or is the
label in the "wrong" place?

There are a very large number of antibodies that do label tissues after been
fixation using your fixative so it is easy to suspect that something is
going on with your specimen preparation.

Try this: fix your tissues with formaldehyde alone and prepare the specimens
for EM post-embedding (i.e. Labeling sections). Prepare semi-thin sections,
mount them on glass coverslips (or slides) and immunolabel for light
microscopy. You should be able to see a signal if you use fluorescent
secondaries on LR White or Lowicryl-embedded material and cryosectioned
specimens.

Contact me if you need more help.

Regards,

Paul Webster.




Paul Webster, Ph.D
House Ear Institute
2100 West Third Street
Los Angeles, CA 90057
(213) 273 8026
pwebster-at-hei.org


} From: {dennis1231-at-yahoo.com}
} Reply-To: {dennis1231-at-yahoo.com}
} Date: Thu, 1 Mar 2007 11:03:42 -0600
} To: {pwebster-at-hei.org}
} Subject: [Microscopy] viaWWW: immunoEM antibody
}
}
}
}
} ----------------------------------------------------------------------------
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} ---------------------------------------------------------------------------
}
} Email: dennis1231-at-yahoo.com
} Name: Dennis McDaniel
}
} Title-Subject: [Filtered] immunoEM antibody
}
} Question: Hello,
}
} I am doing some immunoEM work for another researcher, and so far none
} of the antibodies we have tried have been successful. The researcher
} would simply like to see the correct immunolocalization of anything
} in order to validate the fixation and labeling methods we are using.
}
} I am in search of a commercially available antibody suitable for
} immunoEM in cells/tissues that have been fixed in 4%
} formaldehyde/0.5% glutaraldehyde. Ideally, the antibody would raised
} against an epitope that is present in most or all sections of most
} cells and that is localized to structures that may be easily
} discerned in cells that have not undergone optimal fixation (i.e. no
} OsO4 post-fix). I am thinking of something like an antibody to a
} mitochodrial or nuclear component. While I realize that no antibody
} will work in all cells, I was hoping someone may know of an antibody
} to a highly conserved protein that has worked in several different
} cell types.
}
} Any suggestions?
}
}
} ---------------------------------------------------------------------------
}
} ==============================Original Headers==============================
} 9, 12 -- From zaluzec-at-microscopy.com Thu Mar 1 11:00:04 2007
} 9, 12 -- Received: from [172.16.1.63] (msdvpn8.msd.anl.gov [130.202.238.72])
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} 9, 12 -- From: dennis1231-at-yahoo.com (by way of MicroscopyListserver)
} 9, 12 -- Subject: viaWWW: immunoEM antibody
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==============================Original Headers==============================
15, 20 -- From PWebster-at-hei.org Thu Mar 1 12:29:36 2007
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15, 20 -- Subject: Re: [Microscopy] viaWWW: immunoEM antibody
15, 20 -- From: "Webster, Paul" {PWebster-at-hei.org}
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From: sarj0007-at-unf.edu
Date: Thu, 1 Mar 2007 16:48:55 -0600
Subject: [Microscopy] viaWWW: Drying out live cells

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Email: sarj0007-at-unf.edu
Name: Jason Saredy

Organization: University of North Florida

Title-Subject: [Filtered] Drying out live cells

Question: I have some cells in a MEM(mostly salts and amino acids and
the like) that I would like to image with our ESEM in environmental
mode. This is my first time trying to view live material and spent
all afternoon trying to slowly dry out the sample and ended up over
drying and lysing the cells. Does anyone with experience in this
area know what would be the optimal way to slowly dry the sample in
the chamber (ie what RH, how long, pressure)? Or perhaps a good
reference on how to do this? Thank you. And I apologize if this
went out three times, i tried emailing the listserv directly and it
kept bouncing back.



-Jason Saredy



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From: PWebster-at-hei.org
Date: Thu, 1 Mar 2007 17:01:22 -0600
Subject: [Microscopy] EMBO World Course 2007

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

In case anyone is interested, the European Molecular Biology Organization is
funding an electron microscopy practical course in Singapore this year.

There are no fees for the course but applicants are chosen on the quality of
their scientific proposals.

The web site provides more details than I can cover here.

http://cwp.embo.org/wpc07-04/

Regards,

Paul Webster.


Paul Webster, Ph.D
House Ear Institute
2100 West Third Street
Los Angeles, CA 90057
(213) 273 8026
pwebster-at-hei.org




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From: dcromey-at-email.arizona.edu
Date: Thu, 1 Mar 2007 17:36:24 -0600
Subject: [Microscopy] imaging membrane migration assays

Contents Retrieved from Microscopy Listserver Archives
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A colleague is doing migration assays using transwell plates. The
smaller transwells are darn near impossible to image because the wells
are both too deep for an upright scope and not deep enough for an
inverted. I suppose we could cut the membranes out of the wells and
mount them on slides, but I seem to remember that they have the nasty
habit of rolling up when you cut them out.

Does anyone have any good tricks/tips for imaging these membranes? Is
there a mounting media with an RI that will make the membrane almost
disappear?

Thanks,
Doug

I asked what brand plates they were using and the response was:

BD Falcon* Cell Culture Companion Plates for Inserts - 24well
BD Falcon* Cell Culture Inserts

--
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Douglas W. Cromey, M.S. - Assistant Scientific Investigator
Dept. of Cell Biology & Anatomy, University of Arizona
1501 N. Campbell Ave, Tucson, AZ 85724-5044 USA

office: AHSC 4212 email: Cromey-at-Arizona.edu
voice: 520-626-2824 fax: 520-626-2097

http://swehsc.pharmacy.arizona.edu/exppath/
Home of: "Microscopy and Imaging Resources on the WWW"


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From: phillipst-at-missouri.edu
Date: Thu, 1 Mar 2007 17:53:09 -0600
Subject: [Microscopy] Re: viaWWW: Drying out live cells

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

I am not 100% clear on your protocol but if you dry out cells in MEM, you
are exposing them to a high osmotic buffer in the process and therefore it
would be surprising if they didn't lyse. The water will evaporate but the
salts simply concentrate.


At 04:50 PM 03/01/07, you wrote:



} ----------------------------------------------------------------------------
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9, 21 -- Subject: Re: [Microscopy] viaWWW: Drying out live cells
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From: musselmannk-at-mail.nih.gov
Date: Fri, 2 Mar 2007 00:15:23 -0600
Subject: [Microscopy] \viaWWW: Fluorescence staining of frozen sections

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Email: musselmannk-at-mail.nih.gov
Name: Kurt Musselmann

Organization: NIH/NIDCR

Title-Subject: [Filtered] Fluorescence staining of frozen sections

Question: Hi all

I am trying to do fluorescence staining of frozen sections (10 um
thick). Do I have to include a step in which I wash the OCT off the
slides? or will fixing them in acetone do?

Alternatively, can I just fix the tissue in ethanol and proceed in
the same fashion that I would for normal staining? (H&E, for
example?). (ethanol, then wash with water to get rid of the OCT,
then staining).

Thanks

Kurt


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From: David.Llewellyn-at-anu.edu.au
Date: Fri, 2 Mar 2007 00:15:58 -0600
Subject: [Microscopy] viaWWW: Equipment Wanted

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Email: David.Llewellyn-at-anu.edu.au
Name: David Llewellyn

Organization: Australian National University

Title-Subject: [Filtered] Equipment Wanted

Question: Would anyone have for sale any TEM Xsection prep.
equipment? wanted to start up a new lab. Ion Beam
mill,polishers,dimplers etc.

---------------------------------------------------------------------------

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From: Elliott-at-arizona.edu
Date: Fri, 2 Mar 2007 11:31:17 -0600
Subject: [Microscopy] Inkjet printers for EM, LM, Confocal, or Scientific Photography

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi John
Thank you for that info. I did not know about turning off the
printer to decrease the ink drying question.
David


On Mar 2, 2007, at 10:00 AM, John Mackenzie wrote:

}
} David:
}
} Yes and no. The C80 series is fairly stable but needs to be exercised
} once a week. There are two things that are worth noting. The printer
} retracts the ink when the printer is turned off USING THE BUTTON ON
} THE
} TOP. (Using a strip to kill power does not) If you leave the
} printer on
} all the time the ink is sitting at the ready and dries out faster. The
} Epson system although the best does suffer from this problem. My
} C80 was
} more prone to this problem than the current C88. The C88 plus is so
} fast
} that it is worth the $80 to replace even a C88 let alone a C80. My
} advice would be to use the ink you have then upgrade (For about the
} cost
} of inks you get new printer). It is REALLY fast.
}
} This info might be useful to others so if it is ok with you, you might
} want to post it to the web.
}
}
}
} John
}
}
}
} David Elliott wrote:
} } Hi John
} }
} } I have a question about inkjet printers. I have a C80 that does
} } fine when it is used regularly, but if it is not used for a few
} } days the ink jets clog up and much ink is wasted cleaning the
} } print head.
} } Is this the same for all inkjets? Is there something that I can
} } do to keep my underused printers working?
} }
} } Thank you
} } David
} }
} }
} } On Feb 26, 2007, at 12:00 PM, john_mackenzie-at-ncsu.edu wrote:
} }
} } }
} } }
} } }
} } } --------------------------------------------------------------------
} } } --------
} } } The Microscopy ListServer -- CoSponsor: The Microscopy Society
} } } of America
} } } To Subscribe/Unsubscribe -- http://www.microscopy.com/
} } } MicroscopyListserver
} } } On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} } } --------------------------------------------------------------------
} } } --------
} } }
} } } Hi all:
} } }
} } } The needs of scientific digital imaging are not the same as they
} } } are for
} } } photography. We have done extensive testing of the printers and
} } } it boils
} } } down to two inkjets and one Laserjet
} } }
} } } The Epson C88 plus.. The best printer in the world for printing
} } } on plain
} } } paper C88 plus for a whopping $88.00 Nothing competes with it on
} } } plain
} } } paper. Total cost of a color print $0.17 with ink full coverage
} } }
} } } The best printer for black and white printing, and color
} } } printing on
} } } special papers is the Epson R2400. $700-800 range.
} } }
} } } The inks that Epson uses are very, very specialized and PATENTED.
} } } All
} } } "third party" inks are grossly inferior. ( Yes we have tested
} } } several
} } } but it requires purchasing flushing cartridges to switch so we
} } } rarely do
} } } it now)
} } }
} } } We really were impressed with the prints that John Cone was able to
} } } produce.( Piezography B/W )They were striking HOWEVER the print
} } } driver is seriously flawed
} } } and will not give you results that are scientifically valid. The
} } } new R2400 has
} } } a dedicated K3 mode that beats the Cone system running away.It is
} } } scientifically valid. I have both The Cone idea of using
} } } multiple blacks is a
} } } good one but Epsons implementation is the only one to use. Epson
} } } has added
} } } a B/W Tint mode that allows you to fine tune the BW so that it
} } } looks just like
} } } Agfa Boviera prints Longevity 200 years
} } }
} } } An 8 x 10 B/W print was $2 to $3 many years ago . If you actually
} } } do the
} } } experiment (which photographers do not) an 8 x 11 print on Premium
} } } photo glossy paper with full coverage is $0.50 for the paper and
} } } $0.15
} } } for the ink. If you use inferior ink with no tested longevity and
} } } unknown fading characteristics you might save $0.10. This makes
} } } no sense
} } } to me.( We by the way use our darkroom to store inks and paper)
} } }
} } } We do most of our work prints on our HP Laserjet in high resolution
} } } graphics mode (2400 dpi, 150 lpi ) at 2 cents a page (including
} } } toner).
} } } Also because the resolution is three times the advertised
} } } resolution,
} } } the you can't use refilled cartridges here either
} } }
} } } If you need a and a better print then use the c88. Save the best
} } } for
} } } the R2400. The three printers cost less than $2000. All
} } } computers have
} } } at least these three.
} } }
} } } In my workshops and my classes we spend 3-5 hours on this very
} } } subject.
} } } I know it is not simple and that this information is mainly the
} } } bullet
} } } conclusions.
} } }
} } } There are actually several other reasons for never using refilled
} } } inks
} } } or toners bottom line is that it is a bad practice and we never
} } } do it.
} } } We always use Epson papers for inkjets and we use Hammermill
} } } Laser for
} } } Lasrjets. (Sometimes Epson Bright white which costs the same)
} } }
} } } John
} } }
} } } --John Mackenzie, Jr.
} } } Coordinator for the Center for Electron Microscopy
} } } Professor of Microbiology
} } } North Carolina State University
} } } Phone (919) 515-2664 Fax (919) 515-8293
} } }
} } }
} } }
} } } ==============================Original
} } } Headers==============================
} } } 15, 19 -- From john_mackenzie-at-ncsu.edu Mon Feb 26 12:56:34 2007
} } } 15, 19 -- Received: from uni05mr.unity.ncsu.edu
} } } (uni05mr.unity.ncsu.edu [152.1.224.164])
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} } } Nv5.2006.1109) with ESMTP id l1QIuWM1007166
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} } } 13:56:33 -0500 (EST)
} } } 15, 19 -- Message-ID: {45E32D65.9070004-at-ncsu.edu}
} } } 15, 19 -- Date: Mon, 26 Feb 2007 13:56:37 -0500
} } } 15, 19 -- From: John Mackenzie {john_mackenzie-at-ncsu.edu}
} } } 15, 19 -- User-Agent: Thunderbird 1.5.0.9 (Windows/20061207)
} } } 15, 19 -- MIME-Version: 1.0
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} } } 15, 19 -- Subject: Re: Inkjet printers for EM, LM, Confocal, or
} } } Scientific Photography
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} } } format=flowed
} } } 15, 19 -- Content-Transfer-Encoding: 7bit
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} } } 15, 19 -- X-Spam-Level: IIIIIII
} } } ==============================End of -
} } } Headers==============================
} }
}
} --
} John M. Mackenzie Jr., PhD
} Professor of Microbology
} Coordinator, Center for Electron Microscopy
} Phone 919-515-2664 Fax 919-515-8293
}
}


==============================Original Headers==============================
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From: dac-at-research.umass.edu
Date: Fri, 2 Mar 2007 12:11:19 -0600
Subject: [Microscopy] Source of supplies for Balzers/Baltec (FF, evaporators)

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi all,

I know that Baltec has changed distribution in the last year or so. I
was recently quoted a price for oscillator crystals of 2x what I had
paid to the previous supplier. Fortunately I located some old stock
(they were stored well, silver is not oxidized...) at the previous
pricing. Double is quite a price jump.

Is there an alternative to these doubled prices? Does anyone using
Baltec supplies have suggestions for supplies and support that haven't
taken such a steep jump. We have a Freeze-Fracture and a turbo-pumped
evaporator unit, and use the usual supplies for E-beam evaporators, film
thickness monitors, and the like.

Thanks,

Dale Callaham

==============================Original Headers==============================
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From: togo-at-uvic.ca
Date: Fri, 2 Mar 2007 13:19:37 -0600
Subject: [Microscopy] LM video cameras

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

We are looking at putting new video cameras on our teaching microscopes and
would like to be able to use as much of the resolution of the data
projectors in our classrooms as possible. In the past we've used small CCD
NTSC cameras that were intended for security purposes, but now we'd like
to be able to get something in the order of 1280 by 1024 pixels onto the
screen.

We'd be very grateful for suggestions of what other users have found worked
well for this purpose. Thanks for your thoughts.
_____________________________________
Tom Gore | Advanced Imaging Laboratory
Department of Biology | University of Victoria
Box 3020 Station CSC
Victoria BC V8W 3N5 Canada
voice 250 721 7134 fax 250 721 7120
web: http://web.uvic.ca/ail/


==============================Original Headers==============================
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From: microscopytoday-at-tampabay.rr.com
Date: Fri, 2 Mar 2007 13:22:06 -0600
Subject: [Microscopy] Microscopy Today Table of Contents March 2007

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Listers,

Here is the March 2007 Microscopy Today table of contents. I will close
the subscription list for this issue on Wednesday, Mar. 7th, 2007.

Microscopists in North America and MSA members anywhere can subscribe
for free. Anyone else may subscribe for US$50 per year (to PARTIALLY
cover postage). All subscriptions at http://www.microscopy-today.com
Thank you.

Ron Anderson, Editor
================================
Microscopy Reveals Early Neolithic Dentistry
Stephen W. Carmichael, Mayo Clinic

Microscopic Analysis of Metal Recovered from the Wreck of RMS Titanic
J.J. Hooper McCarty1 and T. Foecke1,2, 1The Johns Hopkins University,
Baltimore, MD, 2NIST, Gaithersburg, MD

STEM Imaging of Lattice Fringes and beyond in a UHR In-Lens
Field-Emission SEM
Vinh Van Ngo, Mike Hernandez, Bill Roth, and David C Joy,* Hitachi High
Technologies America, Inc., *University of Tennessee, Knoxville, TN

From the McArthur to the Millennium Health Microscope (MHM): Future
Developments in Microscope Miniaturization for International Health
Keith Dunning1 & J. Russell Stothard2, 1Dunning Associates, Bedford,
UK., 2Natural History Museum, London, UK

A Novel Technique of Hair Removal to Examine the Cuticle of Arthropods
B. N. Philip and C. Shillington, Eastern Michigan University, Ypsilanti, MI

Site Specific Three-dimensional Structural Analysis in Tissues and Cells
Using Automated DualBeam Slice &View
Ben Lich, FEI Company, Eindhoven, The Netherlands

Feature Characterization of Microfluidic Channels Created Using Direct
Laser Ablation
John Little* and Dan Borah,** *Hyphenated Systems, LLC, Burlingame, CA,
**University of Mass., Dartmouth, MA

Negatice Stiffness Vibration Isolation Technology for Nanotechnology
David L. Platus, Minus K Technology, Inc., Inglewood, CA

Improving Membrane Staining of Cultured Cells Using Ferrocyanide as a
Post-Fixative
Stéphane Nizet

The Preparation of Mg, Cd and Zn Samples for Crystal Orientation Mapping
with BKD in an SEM
R.A. Schwarzer, Clausthal Univ. of Technology, Clausthal-Zellerfeld, Germany

Visualisation of Native Surfaces by Two-Step Molding
Stanislav N. Gorb, Max Planck Inst. for Metals Research, Stuttgart, Germany

Cold Temperature Preparation of XTEM Specimens of Embedded Metallic
Nanoparticles
Bernt Johannessen, David J. Llewellyn, Patrick Kluth, and Mark C.
Ridgway, Australian National University, Canberra, Australia

Industry News
NetNotes
SAMPLE PREPARATION - frozen tissue for TEM
SAMPLE PREPARATION - fixation of whole mosquitoes
SAMPLE PREPARATION - fixation for mitochondria
SAMPLE PREPARATION - fixation of mouse brain tissue
SAMPLE PREPARATION - purpose of PVP
SAMPLE PREPARATION - maleate buffers
SAMPLE PREPARATION - Vibratome sections
SAMPLE PREPARATION - LR White polymerization problem
SAMPLE PREPARATION – SEM of cells without critical point drying
SAMPLE PREPARATION - SEM of cells in monolayer
SAMPLE PREPARATION - SEM of Zebra fish
SAMPLE PREPARATION - critical point drying
MICROTOMY - cryo-ultramicrotomy
MICROTOMY - specimen advance
LM - S waves in phase contrast optics
LM - 3-D reconstruction from serial paraffin sections
MICROSCOPY - LASIK, floaters, and posterior vitreous detachment
TEM - defect density threshold
TEM - effect of high temperature on grids
TEM - cleaning a LaB6 emitter
TEM - power line and stray field shielding
SEM - solid state versus a scintillator
SEM - low vs. high vacuum mode
SEM - beam penetration
EBL/ PMMA Mask

Index of Advertisers


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From: gary-at-gaugler.com
Date: Fri, 2 Mar 2007 14:08:56 -0600
Subject: [Microscopy] Re: LM video cameras

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

If you find something like this, that would be
interesting to know. The only ones I know of
are not composite output but rather separate
colors and sync and require a control box and
special monitor (i.e., pricey).

By definition, NTSC is 768x494 and usually winds
up being 640x480.

gary g.


At 11:21 AM 3/2/2007, you wrote:




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From: r-holdford-at-ti.com
Date: Fri, 2 Mar 2007 14:53:18 -0600
Subject: [Microscopy] Re: LM video cameras

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

I like the Jenoptik ProgRes series of cameras
(http://www.jenoptik-los.de/cms.php?pageid=707&lang=1). Admittedly,
I've never tried projecting my data but it looks good on the computer
screen, especially with the CapturePro software that comes with the
camera. We have the FireWire models and use them in materials research.

togo-at-uvic.ca wrote:
} ----------------------------------------------------------------------------
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} We are looking at putting new video cameras on our teaching microscopes and
} would like to be able to use as much of the resolution of the data
} projectors in our classrooms as possible. In the past we've used small CCD
} NTSC cameras that were intended for security purposes, but now we'd like
} to be able to get something in the order of 1280 by 1024 pixels onto the
} screen.
}
} We'd be very grateful for suggestions of what other users have found worked
} well for this purpose. Thanks for your thoughts.
} _____________________________________
} Tom Gore | Advanced Imaging Laboratory
} Department of Biology | University of Victoria
} Box 3020 Station CSC
} Victoria BC V8W 3N5 Canada
} voice 250 721 7134 fax 250 721 7120
} web: http://web.uvic.ca/ail/
}
}
} ==============================Original Headers==============================
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--
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Becky Holdford (r-holdford-at-ti.com)
972-995-2360
972-648-8743 (pager)
SC Packaging FA Development
Texas Instruments, Inc.
Dallas, TX
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~


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From: TindallR-at-missouri.edu
Date: Fri, 2 Mar 2007 15:17:07 -0600
Subject: [Microscopy] Dryer for TEM films?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi Listers,

By some happy chance, might somebody in Listland have surplus film
drying cabinet? We are making room for a new microscope and need to get
rid of our BIG film dryer and hope to replace it with one of a size more
suited to the new world of digital micrography----i.e., much smaller.

We would be happy to pay shipping and a reasonable price for a
dust-discouraging dryer, ideally with a fan.

Thanks,
Randy

Randy Tindall
Senior EM Specialist
Electron Microscopy Core Facility---We Do Small Well!
W125 Veterinary Medicine
University of Missouri
Columbia, MO 65211
Tel: (573) 882-8304
Fax: (573) 884-2227
Email: tindallr-at-missouri.edu
Web: http://www.emc.missouri.edu
On-line calendar:
http://biotech.rnet.missouri.edu/cgi-bin/Calcium310.pl?Op=Splash&Amount=
Week&NavType=Both&Type=TimePlan


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From: mager-at-interchange.ubc.ca
Date: Fri, 2 Mar 2007 15:54:37 -0600
Subject: [Microscopy] LM video cameras

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Dear Tom,
I just purchased a Motic (www.motic.com) microscope camera to replace the
old Pixera camera that died. These are not video cameras, but frame capture
cameras that capture a 1.3 megapixel colour image directly into a computer
over about 10 seconds. The focus mode is a faster scan, but not as high
resolution. The whole kit was only $430 CAD and included about five adapters
to fit the camera to the light microscope, all cables and software. I think
you will have a problem finding a high-resolution video camera and it might
be very expensive.
Having said that, you can now purchase a consumer HD video camera for less
than $1000. If it has a live output to the computer and you can make an
adaptor to fit it to the microscope, it should work. If you don't really
need video capture speeds, you will get more for less money with a frame
capture system.
My two pixels worth.
Regards,

Mary Mager
Electron Microscopist
Materials Eng. UBC
#309 - 6350 Stores Road
Vancouver, B.C. V6T 1Z4
Canada
Tel: 604-822-5648
Fax: 604-822-3619
email: mager-at-interchange.ubc.ca

-----Original Message-----
X-from: togo-at-uvic.ca [mailto:togo-at-uvic.ca]
Sent: March 2, 2007 11:25 AM
To: mager-at-interchange.ubc.ca

We are looking at putting new video cameras on our teaching microscopes and
would like to be able to use as much of the resolution of the data
projectors in our classrooms as possible. In the past we've used small CCD
NTSC cameras that were intended for security purposes, but now we'd like
to be able to get something in the order of 1280 by 1024 pixels onto the
screen.

We'd be very grateful for suggestions of what other users have found worked
well for this purpose. Thanks for your thoughts.
_____________________________________
Tom Gore | Advanced Imaging Laboratory
Department of Biology | University of Victoria
Box 3020 Station CSC
Victoria BC V8W 3N5 Canada
voice 250 721 7134 fax 250 721 7120
web: http://web.uvic.ca/ail/


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From: kraftpiano-at-gmail.com
Date: Fri, 2 Mar 2007 17:10:39 -0600
Subject: [Microscopy] SEM EBIC module & Carbon accessory extra to my needs. Trade?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

I have an ISI ABT-SX40A SEM EBIC module, including the following:

EMF-II IE Amp (Unit from inside the chamber)

NIIOREOIP option board (Controller for the EBIC Image contrast)

connecting cables to connect into an AMS-110 option box.

All was working when microscope was decomissioned. I will include the
control module box if necessary, but if you don't need it, let me know.

I also have an extra Denton Desk II Carbon Accessory. I don't have the
sputter coater, so this is extra to my needs.

I have no use for these, but if you would like them, let me know what you
have to trade.

I run a non-profit organization which allows middle and high school students
to submit research proposals and complete research using our lab facility.

I would really like some kind of digital imaging system (Any kind that will
work on an older analog SEM), backscattered electron detector, or a sputter
coater.


Thanks,

Justin A. Kraft
Director
Center for Inquiry-Based Science Education

==============================Original Headers==============================
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12, 26 -- From: "Justin Kraft" {kraftpiano-at-gmail.com}
12, 26 -- To: Microscopy-at-microscopy.com
12, 26 -- Subject: SEM EBIC module & Carbon accessory extra to my needs. Trade?
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From: gwe-at-ufl.edu
Date: Sat, 3 Mar 2007 17:57:05 -0600
Subject: [Microscopy] Microsopy Position

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

} ASSISTANT PROFESSOR – MICROBIOLOGY AND CELL SCIENCE
}
} and
}
} DIRECTOR of ELECTRON MICROSCOPY and BIOIMAGING LABORATORY in the
INTERDISCIPLINARY CENTER FOR BIOTECHNOLOGY RESEARCH (ICBR)
}
}
} The Department of Microbiology and Cell Science, in partnership with
the Interdisciplinary Center for Biotechnology Research (ICBR) at the
University of Florida, is seeking a dynamic individual for a tenure
accruing faculty position and the head of an electron microscopy and
bioimaging core laboratory.
}
} The successful candidate will be expected to develop and maintain a
strong, externally-funded research program in microbiology or cell
science, participate in teaching, and direct the Electron Microscopy and
Bioimaging Laboratory (EMBL) within UF’s ICBR, Technical support staff
will be provided to perform the daily service tasks of this ICBR
research facility. As the director, the incumbent will be charged with
setting the vision and acquiring the resources to make the ICBR EMBL
among the best in the nation. Candidates with interests in applying
modern bioimaging technology, including electron microscopy, to
important problems in cellular or molecular biology are especially
encouraged to apply.
}
}
} This is a 12-month tenure-accruing position that has 50% research,
25% service, and 25% instructional components. This assignment may
change in accordance with the needs of the units. Instructional
responsibilities will be to participate in teaching undergraduate and
graduate courses. The faculty member will also supervise graduate
student theses and dissertations.
}
}
} Required qualifications are a Ph.D. degree in cell biology or related
field, at least two years of postdoctoral research experience, and a
significant record of productivity, as demonstrated through refereed
publications, including published productivity in bioimaging.
}
} Salary and startup package will be competitive.
}
}
} To apply, submit a cover letter, curriculum vitae, a statement of
research and teaching interests in one electronic file to the email
below. Request official transcripts of your graduate academic work to be
sent directly from institution to the address below. Also request that 3
referees send letters of recommendation to the email below and a signed
copy of the letter to the address below. Review of applications will
begin March 15, 2007. Nominations of candidates are encouraged. Women
and minorities are encouraged to apply. Please forward all
applications, nominations and inquiries to:
}
}
} Dr. Peter Kima
}
} Chair, Search and Screen Committee
}
} Department of Microbiology and Cell Science
}
} University of Florida, PO Box 110700, Gainesville, FL 32611-0700
}
} Phone: (352)392-0384; Fax: (352)392-5922. E-mail: pkima-at-ufl.edu
}
}
} BACKGROUND INFORMATION: The Department of Microbiology and Cell
Science is an academic unit in the College of Agricultural and Life
Sciences within the Institute of Food and Agricultural Sciences (IFAS)
of the University of Florida (http://microcell.ufl.edu). It has well
established and extramurally funded programs in the areas of immunology,
microbial genetics, biochemistry, and physiology, as well as
host-parasite relationships, innate immunity, and biotechnology. The
Department offers B.S., M.S. and Ph.D. degrees through the College of
Agricultural and Life Sciences; the undergraduate degree is also offered
through the College of Liberal Arts and Sciences. Research programs are
sponsored through the Florida Agricultural Experiment Station. The
University of Florida, a land-grant university and member of the
Association of American Universities, enrolls approximately 48,000
students in seventeen academic units, including the Colleges of
Agricultural and Life Sciences, Dentistry, Engineering, Liberal Arts and
Sciences, Medicine, and Veterinary Medicine, and the School Of Natural
Resources and Environment.
}
}
} The ICBR is a campus-wide center that provides state-of-the-art
scientific expertise, training, instrumentation, and technologies to
faculty, staff, graduate students, and other research partners
throughout the university, state and nation (www.biotech.ufl.edu). The
ICBR Core Laboratories, including the Electron Microscopy Bioimaging
Laboratory, are staffed by ICBR personnel who are expert in each of the
research laboratory technologies (genomics, proteomics, sequencing, gene
expression, mass spectrometry, microarrays, hybridoma, flow cytometry,
electron microscopy, molecular biomarkers, genetic analysis, and
bioinformatics). The staff also advises and offers scientific and
technical consultation for investigators, and is strongly committed to
developing new advances in their technology areas and to passing this
knowledge on to faculty users.
}
} The University is located in Gainesville, Florida, a community with a
population of approximately 150,000 people in the metropolitan area,
located in North Central Florida, approximately mid-way between the
Atlantic Ocean and the Gulf of Mexico.
}


--
Greg Erdos
University of Florida, Retired
Micanopy, Florida

==============================Original Headers==============================
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From: nizets2-at-yahoo.com
Date: Sun, 4 Mar 2007 13:33:37 -0600
Subject: [Microscopy] mosquito by SEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Dear colleagues,

A friend of mine needs a picture of a mosquito by SEM
to illustrate a presentation about mosquitoes.
Does anyone knows where to find good quality pictures
for free?

Best regards,

Stephane



____________________________________________________________________________________
Get your own web address.
Have a HUGE year through Yahoo! Small Business.
http://smallbusiness.yahoo.com/domains/?p=BESTDEAL

==============================Original Headers==============================
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6, 19 -- From: Stephane Nizet {nizets2-at-yahoo.com}
6, 19 -- Subject: mosquito by SEM
6, 19 -- To: microscopy-at-microscopy.com
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From: henriks-at-cox.net
Date: Sun, 4 Mar 2007 14:02:32 -0600
Subject: [Microscopy] mosquito by SEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Stephane:

Try www.scharfphoto.com.

Alternatively, you can do a Google image search to see what happens.

Good luck.

David Henriks
Henriks-at-cox.net

-----Original Message-----
X-from: nizets2-at-yahoo.com [mailto:nizets2-at-yahoo.com]
Sent: Sunday, March 04, 2007 11:43 AM
To: Henriks-at-cox.net

Dear colleagues,

A friend of mine needs a picture of a mosquito by SEM
to illustrate a presentation about mosquitoes.
Does anyone knows where to find good quality pictures
for free?

Best regards,

Stephane



____________________________________________________________________________
________
Get your own web address.
Have a HUGE year through Yahoo! Small Business.
http://smallbusiness.yahoo.com/domains/?p=BESTDEAL

==============================Original Headers==============================
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6, 19 -- From: Stephane Nizet {nizets2-at-yahoo.com}
6, 19 -- Subject: mosquito by SEM
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==============================Original Headers==============================
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17, 26 -- Subject: RE: [Microscopy] mosquito by SEM
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From: dac-at-research.umass.edu
Date: Sun, 4 Mar 2007 22:05:58 -0600
Subject: [Microscopy] Re: Fw: Source of supplies for Balzers/Baltec (FF, evaporators)

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Well, I don't think my weekend would have been complete without the
"wisdom" and nasty-toned comments of Mr. Smith. As a simple technician
trying to hold the line on costs for our clients, I think of information
exchange via the web as a very good basis for letting the "free-market"
operate. It worked wonders in remote villages of India where access to
telephones allowed poor farmers to get proper competitive prices for
their crops. And maybe I'm really out of touch, but salaries and
benefits in my neighborhood have been doing a lot of things BESIDES
keeping up.

I wish JERRY SMITH well in his search for full actualization using both
UPPER and lower case character coding.......

Dale Callaham

JERRY SMITH wrote:
}
} ----- Original Message ----- From: "JERRY SMITH" {JSMIT51-at-tampabay.rr.com}
} To: "JERRY SMITH" {JSMIT51-at-tampabay.rr.com}
} Sent: Saturday, March 03, 2007 10:32 AM
} Subject: Re: [Microscopy] Source of supplies for Balzers/Baltec (FF,
} evaporators)
}
}
} } BUT SUPPLIES HAVE ALWAYS BEEN KIND OF ERRATICALLY PRICED, SOMETIMES NOT
} } INCREASING FOR 6 YEARS AND THEN GOING CONSIDERABLY HIGHER, I GUESS
} } THAT IS THE FREE MARKET SYSTEM
} } ----- Original Message ----- From: "JERRY SMITH"
} } {JSMIT51-at-tampabay.rr.com}
} } To: {dac-at-research.umass.edu}
} } Sent: Saturday, March 03, 2007 10:26 AM
} } Subject: Re: [Microscopy] Source of supplies for Balzers/Baltec (FF,
} } evaporators)
} }
} }
} } } I GUESS THEY THINK ONLY THEIR SALARIES
} } } AND BENEFITS GO UP AND EVERYONE
} } } ELSE SHOULD STICK TO THE OLD PRICE FOR A HUNDRED YEARS
} } } ----- Original Message ----- From: {dac-at-research.umass.edu}
} } } To: {JSMIT51-at-TAMPABAY.RR.COM}
} } } Sent: Friday, March 02, 2007 1:12 PM
} } } Subject: [Microscopy] Source of supplies for Balzers/Baltec (FF,
} } } evaporators)
} } }
} } }
} } } }
} } } }
} } } }
} } } } ----------------------------------------------------------------------------
} } } }
} } } } The Microscopy ListServer -- CoSponsor: The Microscopy Society of
} } } } America
} } } } To Subscribe/Unsubscribe --
} } } } http://www.microscopy.com/MicroscopyListserver
} } } } On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} } } } ----------------------------------------------------------------------------
} } } }
} } } }
} } } } Hi all,
} } } }
} } } } I know that Baltec has changed distribution in the last year or so. I
} } } } was recently quoted a price for oscillator crystals of 2x what I had
} } } } paid to the previous supplier. Fortunately I located some old stock
} } } } (they were stored well, silver is not oxidized...) at the previous
} } } } pricing. Double is quite a price jump.
} } } }
} } } } Is there an alternative to these doubled prices? Does anyone using
} } } } Baltec supplies have suggestions for supplies and support that haven't
} } } } taken such a steep jump. We have a Freeze-Fracture and a turbo-pumped
} } } } evaporator unit, and use the usual supplies for E-beam evaporators,
} } } } film
} } } } thickness monitors, and the like.
} } } }
} } } } Thanks,
} } } }
} } } } Dale Callaham
} } } }
} } } } ==============================Original
} } } } Headers==============================
} } } } 5, 19 -- From dac-at-research.umass.edu Fri Mar 2 12:11:18 2007
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From: amich-at-ufl.edu
Date: Mon, 5 Mar 2007 13:45:14 -0600
Subject: [Microscopy] SEM of bacterial adhesion to soft contact lenses

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Dear Servers,

I would like to assess the level of bacterial adhesion to the soft
contact lenses surface with the SEM. Unfortunately I don?t have an
access to environmental mode. Could anyone suggest the reliable
approach to dehydrate soft contact lens without compromising its
surface?
Thank you in advance,

Albina


--
MIKHAYLOVA,ALBINA, PhD


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From: twigg-at-estd.nrl.navy.mil
Date: Tue, 6 Mar 2007 08:32:00 -0600
Subject: [Microscopy] viaWWW: Electrically Insulating Lacqer or Paint

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Name: Mark Twigg

Organization: NRL

Title-Subject: [Filtered] Electrically Insulating Lacqer or Paint

Question: I am looking for an electrically-insulating lacquer or paint that does not need to be baked or heated in order to adhere to a metal surface.

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From: dac-at-research.umass.edu
Date: Tue, 6 Mar 2007 08:59:45 -0600
Subject: [Microscopy] Re: viaWWW: Electrically Insulating Lacqer or Paint

Contents Retrieved from Microscopy Listserver Archives
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You haven't stated the full details of your application so my suggestion
may be useless. Does this need to go into a vacuum? Temperature range?
Voltage you are insulating? Resistivity required?

I would suggest looking into the compounds used for insulating HV
connections to avoid breakdown; generically these are called DAG or
Electro-DAG; electronics supply houses or Amateur Radio suppliers have it.

Or check these for higher tech possibilities:
http://www.cotronics.com/vo/cotr/
http://www.masterbond.com/

I have no interest in these companies....

Dale Callaham

twigg-at-estd.nrl.navy.mil wrote:
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} Title-Subject: [Filtered] Electrically Insulating Lacqer or Paint
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} Question: I am looking for an electrically-insulating lacquer or paint that does not need to be baked or heated in order to adhere to a metal surface.
}
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} ==============================Original Headers==============================
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==============================Original Headers==============================
6, 21 -- From dac-at-research.umass.edu Tue Mar 6 08:59:45 2007
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From: werner-at-rosharon.oilfield.slb.com
Date: Tue, 6 Mar 2007 09:21:24 -0600
Subject: [Microscopy] Re: viaWWW: Electrically Insulating Lacqer or Paint

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Try http://www.glyptal.com/ for glyptal insulating lacquer.

You can probably buy it at the electrical supply store, but the web site
has neat history and a list of products.

Note: I do not work for them or have any financial interest, but I do use
their insulating lacquer.

Oh - and it is very low vapor pressure when dry. Would not use it on a
microscope vacuum system, but it used to be known as "the young
metallurgist's friend" because when you simply could not find the leak in
your vacuum furnace, the trick was to paint all soldered joints with
glyptal while under vacuum; no more leak.

Regards,
Andrew


At 08:33 AM 3/6/2007, you wrote:



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From: kenconverse-at-qualityimages.biz
Date: Tue, 6 Mar 2007 10:23:18 -0600
Subject: [Microscopy] viaWWW: Electrically Insulating Lacqer or Paint

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Mark,
Like the others, since we're lacking some details, I can't promise that this
is your solution, but there are specialty spray acrylics available from the
likes of Newark Electronics that insulate at about 1kV/mil. I've had good
luck with Krylon clear acrylic spray paint. I don't think it's
substantially different (although we have some paint folks on the
listserver who can correct me if I'm wrong) and it's cheap and easy to find.

Ken Converse
owner

QUALITY IMAGES
Servicing Scanning Electron Microscopes
Since 1981
474 So. Bridgton Rd.
Bridgton, ME 04009
207-647-4348
Fax 207-647-2688
kenconverse-at-qualityimages.biz
qualityimages.biz



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Title-Subject: [Filtered] Electrically Insulating Lacqer or Paint

Question: I am looking for an electrically-insulating lacquer or paint that
does not need to be baked or heated in order to adhere to a metal surface.

---------------------------------------------------------------------------

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==============================Original Headers==============================
24, 30 -- From kenconverse-at-qualityimages.biz Tue Mar 6 10:23:18 2007
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From: mager-at-interchange.ubc.ca
Date: Tue, 6 Mar 2007 12:02:36 -0600
Subject: [Microscopy] viaWWW: Electrically Insulating Lacqer or Paint

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Dear Mark,
The classic for this purpose is stopping lacquer, available from suppliers
of electro-polishing and polishing equipment. We get ours from Tolber. It is
a red lacquer, thinned and/or removed with acetone, that is painted on to
mask off parts that are not to be electro-polished.
Good luck,

Mary Mager
Electron Microscopist
Materials Eng. UBC
#309 - 6350 Stores Road
Vancouver, B.C. V6T 1Z4
Canada
Tel: 604-822-5648
Fax: 604-822-3619
email: mager-at-interchange.ubc.ca

-----Original Message-----
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Title-Subject: [Filtered] Electrically Insulating Lacqer or Paint

Question: I am looking for an electrically-insulating lacquer or paint that
does not need to be baked or heated in order to adhere to a metal surface.

---------------------------------------------------------------------------

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From: twigg-at-estd.nrl.navy.mil
Date: Tue, 6 Mar 2007 12:54:21 -0600
Subject: [Microscopy] viaWWW: More 0n - Electrically Insulating Lacquer or Paint

Contents Retrieved from Microscopy Listserver Archives
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Email: twigg-at-estd.nrl.navy.mil
Name: Mark Twigg

Organization: NRL

Title-Subject: [Filtered] Electrically Insulating Lacquer or Paint

Question: I agree with the inquiries that I should have provided a more detailed description of my needs. The lacquer or paint that I need should have the following attributes:

1. Electrically isulating, but it only needs to stand up to 20 V.

2. Low vapor pressure for high vacuum use--it will coat a small region (~3 mm x 3mm) of a transmission electron microscope sample holder.

3. Must go on without heat or baking--I don't want to bake my sample holder.

4. It will not need to withstand high temperatures. It will be used at room temperature.

Thanks again,

Mark

---------------------------------------------------------------------------

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From: kenconverse-at-qualityimages.biz
Date: Tue, 6 Mar 2007 14:17:29 -0600
Subject: [Microscopy] viaWWW: More 0n - Electrically Insulating Lacquer or

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Mark,
I'd be inclined to go with the clear acrylic spray paint. You can keep the
layer extremely thin to avoid any serious outgassing. I'm assuming that the
beam is not going to hit this area, since you said the temperature would be
room temperature. The other items mentioned would probably also work well,
although you might have to deal with a considerably thicker layer and,
therefore, more significant outgassing initially.

Ken Converse
owner

QUALITY IMAGES
Servicing Scanning Electron Microscopes
Since 1981
474 So. Bridgton Rd.
Bridgton, ME 04009
207-647-4348
Fax 207-647-2688
kenconverse-at-qualityimages.biz
qualityimages.biz



-----Original Message-----
X-from: twigg-at-estd.nrl.navy.mil [mailto:twigg-at-estd.nrl.navy.mil]
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To: kenconverse-at-qualityimages.biz

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Email: twigg-at-estd.nrl.navy.mil
Name: Mark Twigg

Organization: NRL

Title-Subject: [Filtered] Electrically Insulating Lacquer or Paint

Question: I agree with the inquiries that I should have provided a more
detailed description of my needs. The lacquer or paint that I need should
have the following attributes:

1. Electrically isulating, but it only needs to stand up to 20 V.

2. Low vapor pressure for high vacuum use--it will coat a small region (~3
mm x 3mm) of a transmission electron microscope sample holder.

3. Must go on without heat or baking--I don't want to bake my sample
holder.

4. It will not need to withstand high temperatures. It will be used at
room temperature.

Thanks again,

Mark

---------------------------------------------------------------------------

==============================Original Headers==============================
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30, 30 -- From kenconverse-at-qualityimages.biz Tue Mar 6 14:17:29 2007
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From: dac-at-research.umass.edu
Date: Tue, 6 Mar 2007 14:48:14 -0600
Subject: [Microscopy] viaWWW: More 0n - Electrically Insulating Lacquer

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Mark,

Since it is a low voltage insulation, what about just a dab of formvar
in chloroform or 1,2-dichlorethane? Make it a bit thick (2% - 5% ?) so
it doesn't flow too much. Formvar is the insulation once (still?) used
on "magnet wire" - they probably use more advanced things for hi-temp
purposes these days. But it should give reasonable adhesion to metal (as
in the wire usage), should dry/outgas at RT and be OK in a high vacuum
(as in thin support films). And most EM labs have some. In a pinch,
polystyrene dissolved in CHCl3 will do the same - people use it for
films (here you could use a bit of dispo petri dish...).

Dale


kenconverse-at-qualityimages.biz wrote:
} ----------------------------------------------------------------------------
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}
} Mark,
} I'd be inclined to go with the clear acrylic spray paint. You can keep the
} layer extremely thin to avoid any serious outgassing. I'm assuming that the
} beam is not going to hit this area, since you said the temperature would be
} room temperature. The other items mentioned would probably also work well,
} although you might have to deal with a considerably thicker layer and,
} therefore, more significant outgassing initially.
}
} Ken Converse
} owner
}
} QUALITY IMAGES
} Servicing Scanning Electron Microscopes
} Since 1981
} 474 So. Bridgton Rd.
} Bridgton, ME 04009
} 207-647-4348
} Fax 207-647-2688
} kenconverse-at-qualityimages.biz
} qualityimages.biz
}
}
}
} -----Original Message-----
} X-from: twigg-at-estd.nrl.navy.mil [mailto:twigg-at-estd.nrl.navy.mil]
} Sent: Tuesday, March 06, 2007 1:57 PM
} To: kenconverse-at-qualityimages.biz
} Subject: [Microscopy] viaWWW: More 0n - Electrically Insulating Lacquer or
} Paint
}
}
}
}
}
} ----------------------------------------------------------------------------
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} Email: twigg-at-estd.nrl.navy.mil
} Name: Mark Twigg
}
} Organization: NRL
}
} Title-Subject: [Filtered] Electrically Insulating Lacquer or Paint
}
} Question: I agree with the inquiries that I should have provided a more
} detailed description of my needs. The lacquer or paint that I need should
} have the following attributes:
}
} 1. Electrically isulating, but it only needs to stand up to 20 V.
}
} 2. Low vapor pressure for high vacuum use--it will coat a small region (~3
} mm x 3mm) of a transmission electron microscope sample holder.
}
} 3. Must go on without heat or baking--I don't want to bake my sample
} holder.
}
} 4. It will not need to withstand high temperatures. It will be used at
} room temperature.
}
} Thanks again,
}
} Mark
}
} ---------------------------------------------------------------------------
}
} ==============================Original Headers==============================
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5, 22 -- From dac-at-research.umass.edu Tue Mar 6 14:48:14 2007
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From: gcouger-at-science-info.net
Date: Tue, 6 Mar 2007 15:11:03 -0600
Subject: [Microscopy] Re: viaWWW: Electrically Insulating Lacqer or Paint

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

McMaster Carr www.mcmaster.com has 3 in spray cans 7437K17 7437K16
7437K18 and if it doesn't need to flex the age old solution of Shellac
should work as well.

Gordon
Gordon Couger
Stillwater OK
www.science-info.net

twigg-at-estd.nrl.navy.mil wrote:
} Email: twigg-at-estd.nrl.navy.mil
} Name: Mark Twigg
}
} Organization: NRL
}
} Title-Subject: [Filtered] Electrically Insulating Lacqer or Paint
}
} Question: I am looking for an electrically-insulating lacquer or paint that does not need to be baked or heated in order to adhere to a metal surface.
}
} -


==============================Original Headers==============================
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From: garygill-at-dcla.com
Date: Wed, 7 Mar 2007 09:22:31 -0600
Subject: [Microscopy] LM: camera adaptor for photomicrography

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Can anyone recommend an inexpensive adaptor that will allow me to couple my
Fuji FinePix E550 digital camera to the trinocular port of my Olympus BX40?
 
Thanks.
 
Gary Gill
 


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2, 17 -- From: Gary Gill {garygill-at-dcla.com}
2, 17 -- To: "'Microscopy-at-Microscopy.Com'" {Microscopy-at-Microscopy.Com}
2, 17 -- Subject: LM: camera adaptor for photomicrography
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From: NWWhite-at-bwxt.com
Date: Wed, 7 Mar 2007 09:58:38 -0600
Subject: [Microscopy] LM: camera adaptor for photomicrography

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

I have not used them, nor have any interest, but you might check with:
www.scopetronix.com

Woody White
BWXT Services


-----Original Message-----
X-from: garygill-at-dcla.com [mailto:garygill-at-dcla.com]
Sent: Wednesday, March 07, 2007 10:23 AM
To: White, Woody N.

Can anyone recommend an inexpensive adaptor that will allow me to couple my
Fuji FinePix E550 digital camera to the trinocular port of my Olympus BX40?
 
Thanks.
 
Gary Gill
 


==============================Original Headers==============================
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==============================Original Headers==============================
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From: microscopytoday-at-tampabay.rr.com
Date: Wed, 7 Mar 2007 10:26:29 -0600
Subject: [Microscopy] LM: camera adaptor for photomicrography

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Scopetronix apparently doesn't exist anymore. Their address is an empty
building, no one answers their phone. If anyone turns them up, please
let me know.

Ron Anderson, Editor
Microscopy Today

NWWhite-at-bwxt.com wrote:
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
} I have not used them, nor have any interest, but you might check with:
} www.scopetronix.com
}
} Woody White
} BWXT Services
}
}
} -----Original Message-----
} X-from: garygill-at-dcla.com [mailto:garygill-at-dcla.com]
} Sent: Wednesday, March 07, 2007 10:23 AM
} To: White, Woody N.
} Subject: [Microscopy] LM: camera adaptor for photomicrography
}
}
}
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
} To Subscribe/Unsubscribe -- http://www.microscopy.com/MicroscopyListserver
} On-Line Help http://www.microscopy.com/MicroscopyListserver/FAQ.html
} ----------------------------------------------------------------------------
}
} Can anyone recommend an inexpensive adaptor that will allow me to couple my
} Fuji FinePix E550 digital camera to the trinocular port of my Olympus BX40?
}
} Thanks.
}
} Gary Gill
}
}
}
} ==============================Original Headers==============================
} 2, 17 -- From garygill-at-dcla.com Wed Mar 7 09:22:30 2007
} 2, 17 -- Received: from sturgeon.dcla.com (dcla.com [207.67.84.53] (may be forged))
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} 2, 17 -- To: "'Microscopy-at-Microscopy.Com'" {Microscopy-at-Microscopy.Com}
} 2, 17 -- Subject: LM: camera adaptor for photomicrography
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From: mike.reedy-at-cellbio.duke.edu
Date: Wed, 7 Mar 2007 11:21:47 -0600
Subject: [Microscopy] Re: LM: camera adaptor for photomicrography

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Look into both Scopetronix and the Microscope Store CamAdapter kits.

Latter is at www.microscope-store.com/index.php/cPath/12_15

We have both kits available, but haven't had time
to evaluate carefully side-by-side. I think the
latter may include some features and a range of
specific add-on adapters that cover more ground;
add-on kit for your Fuji is listed at
www.microscope-store.com/index.php/cPath/12_19

I recommend you talk to both companies by phone and take notes.
-mike reedy-



At 9:27 AM -0600 3/7/07, garygill-at-dcla.com wrote:
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America


--
-mike reedy-

************************
Michael K. Reedy, M.D.
Duke Univ. Med. Center
Dept. Cell Biology, Box 3011 (for U.S. Mail)
458 Alex Sands Bldg, Research Dr (courier)
Durham, NC 27710

Office 919-668-2534
Lab 919-684-5674
Fax 919-681-9929
mike.reedy-at-cellbio.duke.edu
http://note.cellbio.duke.edu/Faculty/Research/Reedy.html


==============================Original Headers==============================
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12, 18 -- From: Mike Reedy {mike.reedy-at-cellbio.duke.edu}
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From: smithj-at-exchange.winthrop.edu
Date: Wed, 7 Mar 2007 11:26:06 -0600
Subject: [Microscopy] RE: LM: camera adaptor for photomicrography

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Try Bobby Martin at Martin Microscope (www.martinmicroscope.com). I
don't know about the FinePix, but they make and sell an adapter for
the Canon digital cameras.
Disclaimer: No commercial connection except that of a satisfied customer.
Julian

} } Can anyone recommend an inexpensive adaptor that will allow me to couple my
} } Fuji FinePix E550 digital camera to the trinocular port of my Olympus BX40?
} }
} } Thanks.
} }
} } Gary Gill
} }

--
Julian P.S. Smith III
Dept. of Biology
Winthrop University
520 Cherry Rd.
Rock Hill, SC 29733

803-323-2111 x6427 (vox)
803-323-3448 (fax)
803-524-2347 (cell)

==============================Original Headers==============================
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From: garygill-at-dcla.com
Date: Wed, 7 Mar 2007 11:32:14 -0600
Subject: Re: [Microscopy] LM: camera adaptor for photomicrography

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Someone at The Microscope Store is emailing me information. Total cost is
about $300. Thanks for the leads, Mike and everyone.

Gary Gill

-----Original Message-----
X-from: Mike Reedy [mailto:mike.reedy-at-cellbio.duke.edu]
Sent: Wednesday, March 07, 2007 12:22 PM
To: garygill-at-dcla.com
Cc: Microscopy Listserver


--
-mike reedy-

************************
Michael K. Reedy, M.D.
Duke Univ. Med. Center
Dept. Cell Biology, Box 3011 (for U.S. Mail)
458 Alex Sands Bldg, Research Dr (courier)
Durham, NC 27710

Office 919-668-2534
Lab 919-684-5674
Fax 919-681-9929
mike.reedy-at-cellbio.duke.edu
http://note.cellbio.duke.edu/Faculty/Research/Reedy.html


==============================Original Headers==============================
15, 20 -- From garygill-at-dcla.com Wed Mar 7 11:32:14 2007
15, 20 -- Received: from sturgeon.dcla.com (dcla.com [207.67.84.53] (may be forged))
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15, 20 -- From: Gary Gill {garygill-at-dcla.com}
15, 20 -- To: "'Mike Reedy'" {mike.reedy-at-cellbio.duke.edu} ,
15, 20 -- Gary Gill
15, 20 -- {garygill-at-dcla.com}
15, 20 -- Cc: Microscopy Listserver {microscopy-at-microscopy.com}
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From: PWebster-at-hei.org
Date: Wed, 7 Mar 2007 11:37:08 -0600
Subject: [Microscopy] EM & LM Digital database

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi,

We need a way to catalog stored images (EM & LM) together with experimental
data (text) for access by in-house researchers as well as off-site users.

Does anyone know of any commercial products available that would fit our
needs?

We have someone here who would like to try to develop this but it will be a
waste of time and money if something is already available.

Regards,

Paul.


Paul Webster, Ph.D
House Ear Institute
2100 West Third Street
Los Angeles, CA 90057
(213) 273 8026
pwebster-at-hei.org



==============================Original Headers==============================
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10, 18 -- User-Agent: Microsoft-Entourage/11.3.3.061214
10, 18 -- Date: Wed, 07 Mar 2007 09:37:06 -0800
10, 18 -- Subject: EM & LM Digital database
10, 18 -- From: "Webster, Paul" {PWebster-at-hei.org}
10, 18 -- To: {Microscopy-at-Microscopy.Com}
10, 18 -- Message-ID: {C2143842.FBF9%PWebster-at-hei.org}
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From: edelmare-at-muohio.edu
Date: Wed, 7 Mar 2007 12:11:44 -0600
Subject: [Microscopy] EM Field sources

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

O.k., I'm looking for some help in understanding electro-magnetic
fields, and the sources generating them.

Here's the issue in my lab we've gone from 0.46mG to 8.7mG in X-axis
EMF-AC, and 1.1mG to 15.2mG in Z-axis EMF-AC. These obviously push
beyond specs for the SEM in the room.

So I am looking for an education. I have no idea of the context to
put this in. What would or could cause these kinds of EM Field
increases (15 to 20 times)? A single new 110V outlet? A new 1000W
UPS in a near by room? A 480V feeder line? A new HVAC blower motor?

These were measurements were made in the middle of a 10ft x 10ft x
9ft room (3.2m x 3.2m x 3m) Next to an SEM, in the Off state (no
power). I operate the rooms on two sides and below, and I have
checked the labs on the other lateral sides and the floor above - no
new equipment or significant electrical services within at least 15
to 50 feet in these spaces. BUT "signifcant" what is significant?
Am I looking for a new 110v outlet? or a computer UPS? Or am I
looking for something in the next building? Or 150feet down the
hall? I have not dug through the ceilings yet to look for any
"hidden" changes but again I do not know what I should be looking
for.

Am I looking for an induced current coming through an eithernet
cable?

I do not have a hand held gauss-meter to track things down. Do I
need one?

Any help would be great. Thanks folks.


Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu

"A main-frame: The biggest PC peripheral available."


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From: tivol-at-caltech.edu
Date: Wed, 7 Mar 2007 12:38:41 -0600
Subject: [Microscopy] Re: EM & LM Digital database

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html


On Mar 7, 2007, at 9:37 AM, PWebster-at-hei.org wrote:

} We need a way to catalog stored images (EM & LM) together with
} experimental
} data (text) for access by in-house researchers as well as off-site
} users.
}
} Does anyone know of any commercial products available that would fit
} our
} needs?
}
} We have someone here who would like to try to develop this but it will
} be a
} waste of time and money if something is already available.
}
Dear Paul,
Are you talking about film or digital images? If the latter, Leginon
not only collects data automatically from a selection of targets, but
it also archives all the data in a database--I think that feature alone
is worth using Leginon for. The program is free, although someone from
your lab will have to attend a training class (also free). Leginon
requires pretty large computer resources, but if you are archiving a
lot of images you will need that in any case. I am not connected with
the purveyors (Clint Potter & Bridget Carrigher) of Leginon except as a
satisfied user, but, in the interest of full disclosure, Christian
Suloway, the developer of many of the modules in Leginon, is a graduate
student here, so we do have better access to fixing bugs than the
average installation.
Yours,
Bill Tivol, PhD
EM Scientist
Electron Cryo-Microscopy Facility
Broad Center, Mail Code 114-96
California Institute of Technology
Pasadena CA 91125
(626) 395-8833
tivol-at-caltech.edu


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From: martini-at-accurel.com
Date: Wed, 7 Mar 2007 16:38:30 -0600
Subject: [Microscopy] viaWWW: Gatan duomill spares - Available

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Email: martini-at-accurel.com
Name: Martin Izquierdo

Organization: Accurel

Title-Subject: [Filtered] Gatan duomill spares

Question: After rummaging through some cabinets I found some Gatan Duomill spares. I have some o-rings, cathodes, even a autoterminator (and other misc duomill related things).

All the items are "free", but you do have to pay for the shipping.

First person who emails me get it.

Regards,

Martin

---------------------------------------------------------------------------

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10, 12 -- Subject: viaWWW: Gatan duomill spares - Available
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From: greta.rennings-at-web.de
Date: Wed, 7 Mar 2007 16:40:40 -0600
Subject: [Microscopy] AskAMicroscopist: analysis of paper

Contents Retrieved from Microscopy Listserver Archives
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Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (greta.rennings-at-web.de) from http://microscopy.com/Ask-A-Microscopist/Ask-A-Microscopist.html on Wednesday, March 7, 2007 at 13:41:04
---------------------------------------------------------------------------

Email: greta.rennings-at-web.de
Name: Greta Rennings

Organization: KU Leuven

Education: Graduate College

Location: Leuven, Brabant, Belgium

Question: Dear ladies and gentlemen,

do you have an idea which microscopic technique would be suitable for analysis of paper?
Firstly for 3D I did trials with CLSM, which were not truly successful as grey scale differences were too low. Other techniques I know would require splitting or sectioning, as far as I know- do you have further experience?
Secondly for 2D I tried light microscopy and SEM, but grey scale differences were to low here too in order to differentiate between components. Could TEM be useful? What could help to get better distinguishable features?

Thank you very much in advance for your support!
Kind regards,
Greta

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From: paul.gerroir-at-xrcc.xeroxlabs.com
Date: Thu, 8 Mar 2007 07:38:36 -0600
Subject: [Microscopy] Darkroom Equipment - Surplus Enlargers

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Good morning,

To those of you who have gone digital and may have an enlarger
collecting dust I might like to hear from you. I have rekindled an
interest in B&W photography and am in need of a used enlarger. Because
shipping will be a major expense I would initially like to limit my
search to the southern Ontario/ upper New York state areas. If you have
an enlarger that you have been considering for disposal please contact
me.



Thanks,

Paul


Paul J. Gerroir

Microscopy
Materials Characterization
Xerox Research Centre of Canada
2660 Speakman Drive
Mississauga, Ontario L5K 2L1

Phone: 905-823-7091, ext.216
FAX: 905-822-7022
e-mail: paul.gerroir-at-xrcc.xeroxlabs.com




==============================Original Headers==============================
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From: jcoleman-at-rdg.boehringer-ingelheim.com
Date: Thu, 8 Mar 2007 07:49:04 -0600
Subject: [Microscopy] EM Field sources

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html



Jim


-----Original Message-----
X-from: Jones,Dr.,Paul-James AN BIP-US-R
Sent: Thursday, March 08, 2007 7:26 AM
To: Coleman,Dr.,James AN BIP-US-R

O.k., I'm looking for some help in understanding electro-magnetic
fields, and the sources generating them.

Here's the issue in my lab we've gone from 0.46mG to 8.7mG in X-axis
EMF-AC, and 1.1mG to 15.2mG in Z-axis EMF-AC. These obviously push
beyond specs for the SEM in the room.

So I am looking for an education. I have no idea of the context to
put this in. What would or could cause these kinds of EM Field
increases (15 to 20 times)? A single new 110V outlet? A new 1000W
UPS in a near by room? A 480V feeder line? A new HVAC blower motor?

These were measurements were made in the middle of a 10ft x 10ft x
9ft room (3.2m x 3.2m x 3m) Next to an SEM, in the Off state (no
power). I operate the rooms on two sides and below, and I have
checked the labs on the other lateral sides and the floor above - no
new equipment or significant electrical services within at least 15
to 50 feet in these spaces. BUT "signifcant" what is significant?
Am I looking for a new 110v outlet? or a computer UPS? Or am I
looking for something in the next building? Or 150feet down the
hall? I have not dug through the ceilings yet to look for any
"hidden" changes but again I do not know what I should be looking
for.

Am I looking for an induced current coming through an eithernet
cable?

I do not have a hand held gauss-meter to track things down. Do I
need one?

Any help would be great. Thanks folks.


Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu

"A main-frame: The biggest PC peripheral available."


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From: martini-at-accurel.com
Date: Thu, 8 Mar 2007 07:59:19 -0600
Subject: [Microscopy] viaWWW: Gatan duomill spares - Gone

Contents Retrieved from Microscopy Listserver Archives
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Email: martini-at-accurel.com
Name: Martin Izquierdo

Organization: Accurel

Title-Subject: [Filtered] Gatan duomill spares - Gone

Question: Wow, I received plenty of responses regarding the Duomill spares and I do have a winner.

Regards,

Martin

---------------------------------------------------------------------------

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From: colijn.1-at-osu.edu
Date: Thu, 8 Mar 2007 08:22:48 -0600
Subject: [Microscopy] Re: EM Field sources

Contents Retrieved from Microscopy Listserver Archives
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Richard,

We've had to fight field issues in an old building. We've found that
most of our fields can be accounted for by someone making a
ground-neutral bond, i.e. tying a neutral to a ground line. This,
while it is low voltage, can generate large currents and hence large
fields. Neutral-ground bonds are against the electrical code but
they still occur.

I can recommend a hand-held gaussmeter which is good to 0.01mG. We
got ours from
http://www.lessemf.com/combi.html. Scroll down to the model
A480. $169 (just a satisfied customer)

It is a single axis meter which we have found to be more useful in
tracking down stray fields than a tri-axial unit. It has been
indispensable, particularly at the price.

Good luck,
Henk

At 01:13 PM 03/07/07, edelmare-at-muohio.edu wrote:



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Hendrik O. Colijn colijn.1-at-osu.edu
Campus Electron Optics Facility Ohio State University
(614) 292-0674 http://www.ceof.ohio-state.edu
Time is that quality of nature which keeps events from happening all
at once. Lately it doesn't seem to be working.


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From: ceren_b68-at-hotmail.com
Date: Thu, 8 Mar 2007 08:28:26 -0600
Subject: [Microscopy] viaWWW: Lectin for FtsZ protein

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Email: ceren_b68-at-hotmail.com
Name: Ceren B¸y¸kkayalar

Organization: Gebze Institute of Techno›logy

Title-Subject: [Filtered] Lectin for FtsZ protein

Question: Hi, everyone
I am a M.S student and I would like to study the bacterial cytoskeletal elements for various bacteria (E. coli for the moment). I would like to label FtsZ, MreB or such proteins with lectins and then label them with gold or directly label these proteins with gold-labelled lectins and then observe the results in TEM.

Does anyone know any specific lectins for bacterial cytoskeletal proteins or anything about this subject?

Any help is appreciated
Thank you in advance


Ceren Buyukkayalar
M.S student
Gebze Institute of Technology
Turkey

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From: john.mardinly-at-intel.com
Date: Thu, 8 Mar 2007 10:51:47 -0600
Subject: [Microscopy] EM Field sources

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Richard;
A cheap ( {$100), readily available handheld field meter like the
Extech 480823, as recommended by Professor David Muller, will help you
locate the source of the fields.
http://www.extech.com/instrument/products/451_499/480823.html


John Mardinly
Intel Corporation

This comment does not represent an opinion of Intel Corporation.

-----Original Message-----
X-from: edelmare-at-muohio.edu [mailto:edelmare-at-muohio.edu]
Sent: Wednesday, March 07, 2007 10:12 AM
To: Mardinly, John

O.k., I'm looking for some help in understanding
electro-magnetic
fields, and the sources generating them.

Here's the issue in my lab we've gone from 0.46mG to 8.7mG in
X-axis
EMF-AC, and 1.1mG to 15.2mG in Z-axis EMF-AC. These obviously push
beyond specs for the SEM in the room.

So I am looking for an education. I have no idea of the context
to
put this in. What would or could cause these kinds of EM Field
increases (15 to 20 times)? A single new 110V outlet? A new 1000W
UPS in a near by room? A 480V feeder line? A new HVAC blower motor?

These were measurements were made in the middle of a 10ft x 10ft
x
9ft room (3.2m x 3.2m x 3m) Next to an SEM, in the Off state (no
power). I operate the rooms on two sides and below, and I have
checked the labs on the other lateral sides and the floor above - no
new equipment or significant electrical services within at least 15
to 50 feet in these spaces. BUT "signifcant" what is significant?
Am I looking for a new 110v outlet? or a computer UPS? Or am I
looking for something in the next building? Or 150feet down the
hall? I have not dug through the ceilings yet to look for any
"hidden" changes but again I do not know what I should be looking
for.

Am I looking for an induced current coming through an eithernet
cable?

I do not have a hand held gauss-meter to track things down. Do
I
need one?

Any help would be great. Thanks folks.


Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu

"A main-frame: The biggest PC peripheral available."


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From: rothbardd-at-netscape.net
Date: Thu, 8 Mar 2007 11:52:01 -0600
Subject: [Microscopy] AskAMicroscopist: analysis of paper

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

If you what you mean by "analysis of paper" is a full 3D structure, the
best I have ever seen was done by a company offering a proprietary
service where serial sections are imaged on the blockface. I have no
commercial interest and am not endorsing them in any way.

http://www.microsciencegroup.com/applications_publications.htm
This page links to their applications papers. Select the one called
"Filtration + Separation" for a Sept 2001 publication showing an
example of filter paper. [I was surprised to see they also had a link
to a Newsweek story in which I was interviewed.]

I, and many others, have had various degrees of success cutting and
registering serial microtome sections of embedded paper. My preferred
current method is SEM imaging after cross sections are prepared by
embedding, polishing, and etching. It is illustrated in my abstract in
the 2002 MSA Annual Meeting, Page 178. A key reference for the method is
G.J. Williams and J.G. Drummond, J. Pulp and Paper Science, V26 (2000),
P. 188

Final note. Surface structure is very well characterized by some of the
modern white light interferometers. No preparation needed.

David R. Rothbard, Ph.D.
BEP

-----Original Message-----
X-from: greta.rennings-at-web.de
To: rothbardd-at-netscape.net
Sent: Wed, 7 Mar 2007 5:40 PM

Below is the result of your feedback form (NJZFM-ultra-55). It was
submitted by
(greta.rennings-at-web.de) from
http://microscopy.com/Ask-A-Microscopist/Ask-A-Microscopist.html
on Wednesday, March 7, 2007 at 13:41:04
-------------------------------------------------------------------------
--

Email: greta.rennings-at-web.de
Name: Greta Rennings

Organization: KU Leuven

Education: Graduate College

Location: Leuven, Brabant, Belgium

Question: Dear ladies and gentlemen,

do you have an idea which microscopic technique would be suitable for
analysis
of paper?
Firstly for 3D I did trials with CLSM, which were not truly successful
as grey
scale differences were too low. Other techniques I know would require
splitting
or sectioning, as far as I know- do you have further experience?
Secondly for 2D I tried light microscopy and SEM, but grey scale
differences
were to low here too in order to differentiate between components.
Could TEM be
useful? What could help to get better distinguishable features?

Thank you very much in advance for your support!
Kind regards,
Greta

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From: bozzola-at-siu.edu
Date: Thu, 8 Mar 2007 14:05:51 -0600
Subject: [Microscopy] CMOS versus CCD cameras

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

What are the advantages/disadvantages of CMOS compared to CCD cameras?

Are they comparable in terms of sensitivity, resolution and durability?

Thank you.

JB
--
##############################################################
John J. Bozzola, Ph.D., Director
I.M.A.G.E. (Integrated Microscopy & Graphics Expertise)
750 Communications Drive - MC 4402
Southern Illinois University
Carbondale, IL 62901 U.S.A.
Phone: 618-453-3730
Email: bozzola-at-siu.edu
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From: Mike.Bode-at-olympus-sis.com
Date: Thu, 8 Mar 2007 14:46:20 -0600
Subject: [Microscopy] CMOS versus CCD cameras

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Both CMOS and CCD sensors convert light into electrical signals that
can be understood and interpreted by a computer, and they both use the
same physical effects for the conversion, so the underlying physical
limitations are the same. The difference is the technology used:

In a CCD chip, all the collected information in the many pixels of the
chip are processed by a very limited number of electronic elements
(voltage amplifier, etc.), often only one. While that can be a drawback
in terms of speed, it does help with the uniformity of the signal. Plus,
the individual pixels of the chip can be almost entirely used for
converting photons to electrons, i.e., the CCD chips use almost 100% of
the available area as light sensitive areas. For even higher sensitivity
one can thin down the chips and illuminate them from the back side.

A CMOS (Complementary Metal-Oxide Semiconductor) chip uses a different
technology for the fabrication. It is actually the same process that is
used for regular electronics, so it is easy to also integrate some
electronic devices on the chip. In a CMOS chip, each pixel has its own
voltage amplifier and perhaps other electronics. In comparison to a CCD
chip then, the uniformity is usually worse (many amplifiers as opposed
to one), and the sensitivity is not as good (some "dead area" for each
pixel). On the other hand, CMOS chips can integrate other electronics on
the same chip ("camera on a chip"), and they can be much more energy
efficient (hence their use in consumer type cameras that depend on
batteries). The fact that the electronic circuits on each pixel eat up
some space made CMOS quite useless for light sensitive chips until a few
years ago, when the dimensions of those electronic circuits had shrunk
to a size that allowed a significant area of each pixel to be used as
light sensitive area.

Factors like resolution are not quite as simple as they appear. You can
make cameras with really small pixels, but what happens is that the
number of electrons you can store in each pixel becomes smaller and
smaller. Comparing this number to the spontaneous generation of
electrons (noise), you can see that the dynamic range of the camera gets
reduced. For example, if you can store 100,000 electrons, and your noise
level is 50 electrons, you can distinguish 2000 intensity levels, or
about 11 bits. If your storage size shrinks to 10,000 electrons, you end
up with 200 levels, or less than 8 bit. On the other hand, if you
increase the pixel size, it takes longer to read them out, and the chip
gets a lot bigger (=$$). But this applies to both CMOS and CCD. So, for
any given set of parameters there is a different chip that is best. That
could be a CMOS or CCD chip.

My personal opinion is that we will see more development in the CMOS
sector (due to their use in consumer cameras), and they will start to
eat into the CCD market. But I don't think that the CCD market will
totally go away, especially in the scientific arena, where it is often
necessary to squeeze some signal out of the last photon.

As far as durability goes, I don't see a reason why a CMOS chip should
have a durability that is different from a CCD chip.

If you need more information, just google "CMOS CCD", and you'll get a
lot of information that goes deeper than what I wrote up here.



Michael Bode, Ph.D.

General Manager

OLYMPUS SOFT IMAGING SOLUTIONS
12596 West Bayaud Ave #300
Lakewood, CO 80228
USA
Tel.: +1 (303) 234-9270
Fax.: +1 (303) 234-9271
E-mail: Mike.Bode-at-olympus-sis.com
www.olympus-sis.com

-----Original Message-----
X-from: bozzola-at-siu.edu [mailto:bozzola-at-siu.edu]
Sent: Thursday, March 08, 2007 13:11
To: Mike Bode

What are the advantages/disadvantages of CMOS compared to CCD cameras?

Are they comparable in terms of sensitivity, resolution and durability?

Thank you.

JB
--
##############################################################
John J. Bozzola, Ph.D., Director
I.M.A.G.E. (Integrated Microscopy & Graphics Expertise) 750
Communications Drive - MC 4402 Southern Illinois University Carbondale,
IL 62901 U.S.A.
Phone: 618-453-3730
Email: bozzola-at-siu.edu
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From: PWebster-at-hei.org
Date: Thu, 8 Mar 2007 14:52:18 -0600
Subject: [Microscopy] RE; EM & LM Digital database

Contents Retrieved from Microscopy Listserver Archives
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Hello again,

Many thanks for the replies concerning digital imaging software. I received
many replies, and also many requests to share the information I collected.

I also met up with a few people I have not contacted in a while and caught
up on a bit of gossip. To all - please stay in contact.

Below is a condensed summary of the replies I received. I have removed
identifiers so that contributors can remain anonymous.

I would say that Hitachi and Olympus (SIS) have been very good at supplying
detail of the software they produce, and I thank them for that. I would
suggest that anyone with specific interests in those software packages
contact thir local people. I can also provide contact info if needed.

There is much more available than I imagined so the message is long.

Many thanks to eveyone who took the time to reply, and best wishes to you
all.

Regards,

Paul

Paul Webster, Ph.D
House Ear Institute
2100 West Third Street
Los Angeles, CA 90057
(213) 273 8026
pwebster-at-hei.org


Summary:
The quick answer is a database (ie Filemaker Pro Server, etc) but for a
valadation product BioImagene Scientific Image Management System has a
good product - BUT it costs.
__________________________________________________________________________
Are you talking about film or digital images? If the latter, Leginon
not only collects data automatically from a selection of targets, but
it also archives all the data in a database--I think that feature alone
is worth using Leginon for. The program is free, although someone from
your lab will have to attend a training class (also free). Leginon
requires pretty large computer resources, but if you are archiving a
lot of images you will need that in any case. I am not connected with
the purveyors (Clint Potter & Bridget Carrigher) of Leginon except as a
satisfied user.
__________________________________________________________________________
I think Quartz PCI software, http://www.qrtz.com/network.html ,may be
just what you are looking for.
__________________________________________________________________________
Extensis Portfolio 8 is one Strong system. I know several of our
Histology / Pathology EM users have a hospital wide system that is very
secure and very stable. The system is available for individual users,
workgroups and as Client/Server solutions (but big $$ for the Bigger
systems).
__________________________________________________________________________
Extensis Portfolio 8 is one Strong system. I know several of our
Histology / Pathology EM users have a hospital wide system that is very
secure and very stable. The system is available for individual users,
workgroups and as Client/Server solutions (but big $$ for the Bigger
systems).
__________________________________________________________________________
Aperio: http://www.aperio.com/productsservices/prod-spectrum.asp
__________________________________________________________________________
Media Cybernetics' IQBase:
http://www.mediacy.com/index.aspx?page=IQBase
__________________________________________________________________________
Have you considered OME at http://www.openmicroscopy.org/
__________________________________________________________________________
I would contact:
OLYMPUS SOFT IMAGING SOLUTIONS
12596 West Bayaud Ave #300
Lakewood, CO 80228
USA
Tel.: +1 (303) 234-9270
Fax.: +1 (303) 234-9271
E-mail: Mike.Bode-at-olympus-sis.com
Or Jason Wickersham {Jason.Wickersham-at-olympus-sis.com}
www.olympus-sis.com
__________________________________________________________________________
see http://www.cerious.com {http://www.cerious.com/} . ThumbsPlus should
do what you want - if not you may need to go to something like Image Central
- http://www.AIC-ImageCentral.com
__________________________________________________________________________

You're after "digital asset management software," yes, DAM for short
You can google the term to get a bunch of vendors. You really don't need
to have your IT department develop the software for you. In addition,
most vendors will let you try out their product for 2 weeks or so before
you buy - I strongly recommend simultaneously trying out several so that
you can compare them.

CanvasX may be what you need. The price is certainly right (~$600). I
don't have experience with it, but it's aimed at a technical work group
market, people doing technical drawings, that sort of thing, from what I
see, it looks like the images can be extensively annotated. You want to
see how many sites can upload images; I suspect it's only one. It's OK
if it's all within one lab, but difficult if several labs want to load
images to the same site. If you're considering putting up videos in
addition to still images, you want to make sure it can handle them.
Check it out at: http://www.acdamerica.com/

Image folio looks like it's aimed at a commercial market (ie, companies
selling images), but it may suit your needs, with the same things to
look for as with CanvasX - I wasn't convinced that this package offers
much in the way of annotation capability (there are 3 packages, from $89
to $750): http://imagefolio.com/

We're using Contentdm (see our site http://cellimages.ascb.org/) -
$10,000 initial license for up to 10,000 images, annual maintenance of ~
$2,000, with lots of tools and considerable flexibility, you can have
password controlled access, intended for display over the Internet:
http://www.dimema.com/ If you have this much $$$, you could create
collections for every user. The license comes with 50 "Acquisitions
Stations," which I believe means that you can have 50 computers with the
capability to upload images. Take a look at our site, we've configured
it to handle video as well as still images. You can also put together
what they call "compound objects" - it's a way of grouping related items
(eg, all the images from a given experiment) so that they all come up
together. We can certainly help you out if you decide to go this
route.

This is a nice grouping of a number of other DAM systems:
http://web.reed.edu/digital_asset_mgmt/systems.html


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From: gary-at-gaugler.com
Date: Thu, 8 Mar 2007 14:59:08 -0600
Subject: [Microscopy] Re: CMOS versus CCD cameras

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

As usual, it depends.

Here is a link to a good comparison:

http://www.dalsa.com/markets/ccd_vs_cmos.asp

The uniformity of CCD imaging is a big deal,
as well as lower noise (which the link does not
really address).

This link:

http://www.imaging-resource.com/PRODS/D30/D30A4.HTM

does discuss noise. Both links discuss the added
external circuitry needed to read out the analog
data from CCD. But having on-chip A/D increases
chip size and also puts pressure on being able to
reduce pixel dimensions. The recent availability
of smaller feature size CMOS helps in this respect.
It also helps with off-chip signal processing which
both sensors have to have.

The choice depends on application and target price.
For imaging satellites, CCD is the choice. So too
for high quality telescope cameras (Peltier cooled).
To my knowledge, no one has made a cooled CMOS sensor.
CMOS has inherently more shot and thermal noise than
CCD. This does not really affect the consumer market.
But for professional users, their cameras use CCD.
The use of CMOS by Canon in an SLR is a first and will be
interesting to follow.

Hope this helps.

gary g.



At 12:07 PM 3/8/2007, you wrote:




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From: camiller-at-anatomy.iupui.edu
Date: Thu, 8 Mar 2007 17:34:53 -0600
Subject: [Microscopy] viaWWW: abstract deadline for joint LAS meeting

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Email: camiller-at-anatomy.iupui.edu
Name: Caroline Miller

Organization: Indiana Microscopy Society

Title-Subject: [Filtered] reminder of abstract deadline for joint LAS meeting

Question: A reminder of abstract deadline for the Joint LAS spring meeting, "Imaging for Nanotechnology," being held in Indianapolis on April 20th and 21st. Deadline has been extended to March 15th.

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From: javaidqazi-at-kemet.com
Date: Thu, 8 Mar 2007 17:35:18 -0600
Subject: [Microscopy] viaWWW: OM Calibration standard Z direction

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Name: Javaid Qazi

Title-Subject: [Filtered] OM Calibration standard Z direction

Question: I am looking for a Z direction Calibration standard for an optical microscope which can do surface profiles, mag ranges from 20 to 1000x.

Please let me know offline what are my options.


Thanks

Javaid


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From: brayandtavsmom-at-comcast.net
Date: Thu, 8 Mar 2007 23:13:28 -0600
Subject: [Microscopy] viaWWW: EDS/WDS systems

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Email: brayandtavsmom-at-comcast.net
Name: Adena Rollins

Organization: Electron Microscopy Program (Delta College)

Title-Subject: [Filtered] EDS/WDS systems

Question: Hello all! I am doing a presentation on EDS and WDS systems and I can't seem to find any information on how much these systems would cost, ready for installation on any TEM/SEM. I understand that there are various types of detector systems..I would just like a ballpark estimate on what these systems might cost. Any information would be greatly appreciated. Thank you

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From: johnf-at-geology.wisc.edu
Date: Fri, 9 Mar 2007 09:31:20 -0600
Subject: [Microscopy] Carbon evaporation coaters

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

A colleague recently told me that a carbon evaporation coater (for
sem/epma samples) now lists for over ~US$55K (full scale model-not
tabletop, with diffusion pump, no thickness monitor). This is
essentially the same unit that I purchased 13 years ago for ~$12K.

Does anyone have any idea why the price for such a unit has increased
by } 400% in 13 years? Are there still "simple full scale" (not
tabletop) models that sell at more "reasonable" prices? (He asked me
if I thought an NSF proposal reviewer would look askance as such a
high cost of a coater in a proposal...)

Thanks.

John
--
========================================================
John Fournelle, Ph.D. office: (608) 262-7964 cell: (608) 438-7480
Cameron Electron Microprobe Lab lab: (608) 265-4798
Dept of Geology & Geophysics fax: (608) 262-0693
University of Wisconsin home: (608) 274-2245
1215 West Dayton St. email: johnf-at-geology.wisc.edu
Madison, WI 53706 amateur radio: WA3BTA
Personal http://www.geology.wisc.edu/~johnf/
Probe lab http://www.geology.wisc.edu/~johnf/sx51.html
Probe Sign Up Calender:
http://www.microscopy.wisc.edu/cgi-bin/calendar/microprobe/calendar.cgi

"The first rule of all intelligent tinkering is to save every cog and
wheel." -- Aldo Leopold

"For a successful technology, reality must take precedence over
public relations, for Nature cannot be fooled." -- Richard P.
Feynman

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From: nairvinods-at-gmail.com
Date: Fri, 9 Mar 2007 12:06:46 -0600
Subject: [Microscopy] posting for a friend of a friend :)

Contents Retrieved from Microscopy Listserver Archives
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Dear Colleagues,

I am posting this on behalf of my friend.

Dr. Godfrey Mbah, faculty at a local college needs to use a Jumbo
Supercritical Point Dryer for his research. If anyone has one within
driving distance from Columbia, SC, please contact him directly. He is
willing to pay for use of the instrument. Godfrey can be reached at
Mbahg-at-benedict.edu.

Thanks for your help.

Soumitra

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From: tivol-at-caltech.edu
Date: Fri, 9 Mar 2007 13:12:58 -0600
Subject: [Microscopy] Re: Carbon evaporation coaters

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On Mar 9, 2007, at 7:31 AM, johnf-at-geology.wisc.edu wrote:

} A colleague recently told me that a carbon evaporation coater (for
} sem/epma samples) now lists for over ~US$55K (full scale model-not
} tabletop, with diffusion pump, no thickness monitor). This is
} essentially the same unit that I purchased 13 years ago for ~$12K.
}
} Does anyone have any idea why the price for such a unit has increased
} by } 400% in 13 years? Are there still "simple full scale" (not
} tabletop) models that sell at more "reasonable" prices? (He asked me
} if I thought an NSF proposal reviewer would look askance as such a
} high cost of a coater in a proposal...)
}
Hi John,
About 3 years ago I got a Cressington 208 evaporation system (both
carbon and the optional metal power supplies) from Pella, and have been
quite satisfied. The cost was about half your quote (but may have
increased). The web site is:

http://www.tedpella.com/cressing_html/intro.html

I have no relationship to Pella except as a satisfied user.
Yours,
Bill Tivol, PhD
EM Scientist
Electron Cryo-Microscopy Facility
Broad Center, Mail Code 114-96
California Institute of Technology
Pasadena CA 91125
(626) 395-8833
tivol-at-caltech.edu


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From: beaurega-at-westol.com
Date: Fri, 9 Mar 2007 14:02:51 -0600
Subject: [Microscopy] Re: Carbon evaporation coaters

Contents Retrieved from Microscopy Listserver Archives
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Hi,

Check out Ladd Research for a free standing evaporator for a lot less than
$55K.
http://www.laddresearch.com

FYI: Ladd Research was the only manufacturer or supplier of a rubber L
gasket with a large lip on the bottom to hold the older and thicker walled
glass bell jars. I tried 5-8 suppliers.
They also supplied me with custom made leads on their dual evaporation unit
for retrofitting to my Cooke thermal boat evaporator. I would ask any
supplier about carbon tread flash evaporations and/or accessories.

Disclaimer: I am just a satified customer that got great customer support
and products.

Paul

At 09:32 AM 3/9/07 -0600, you wrote:
}
}
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

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From: mager-at-interchange.ubc.ca
Date: Fri, 9 Mar 2007 14:03:24 -0600
Subject: [Microscopy] viaWWW: OM Calibration standard Z direction

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Dear Javaid,
The method I know of for calibrating the fine focus knob of the optical
microscope is to measure the thickness of a microscope glass slide with a
fine micrometer, put a mark with felt pen on both sides of the slide, offset
from each other a bit, then record the fine focus reading for the focus on
one mark and the fine focus reading for the other mark. Do this for each
objective. The calibration is then based on the micrometer you use.
Hope this helps.
Regards,

Mary Mager
Electron Microscopist
Materials Eng. UBC
#309 - 6350 Stores Road
Vancouver, B.C. V6T 1Z4
Canada
Tel: 604-822-5648
Fax: 604-822-3619
email: mager-at-interchange.ubc.ca

-----Original Message-----
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Email: javaidqazi-at-kemet.com
Name: Javaid Qazi

Title-Subject: [Filtered] OM Calibration standard Z direction

Question: I am looking for a Z direction Calibration standard for an optical
microscope which can do surface profiles, mag ranges from 20 to 1000x.

Please let me know offline what are my options.


Thanks

Javaid


---------------------------------------------------------------------------

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From: vray-at-partbeamsystech.com
Date: Sat, 10 Mar 2007 03:31:29 -0600
Subject: [Microscopy] viaWWW: OM Calibration standard Z direction

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Dear Mary,

Are you taking into account index of refraction of the glass, while
measuring fine focus of the marks on both sides of the slide? My guess is
that accuracy of such calibration will depend not only on micrometer, but
also on how accurately the index of refraction is known; it should be close
to 1.2 - 1.5 but probably will vary depending on source of the glass, etc.

You probably could use height standards made for AFM, some even NIST
traceable, there are lots of sources, just Google. Of cause the accuracy of
calibration will still depend on the operator...

Cheers,
Valery

-----Original Message-----
X-from: mager-at-interchange.ubc.ca [mailto:mager-at-interchange.ubc.ca]
Sent: Friday, March 09, 2007 3:04 PM
To: vray-at-partbeamsystech.com

Dear Javaid,
The method I know of for calibrating the fine focus knob of the optical
microscope is to measure the thickness of a microscope glass slide with a
fine micrometer, put a mark with felt pen on both sides of the slide, offset
from each other a bit, then record the fine focus reading for the focus on
one mark and the fine focus reading for the other mark. Do this for each
objective. The calibration is then based on the micrometer you use.
Hope this helps.
Regards,

Mary Mager
Electron Microscopist
Materials Eng. UBC
#309 - 6350 Stores Road
Vancouver, B.C. V6T 1Z4
Canada
Tel: 604-822-5648
Fax: 604-822-3619
email: mager-at-interchange.ubc.ca

-----Original Message-----
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---------------------------------------------------------------------------
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---------------------------------------------------------------------------

Email: javaidqazi-at-kemet.com
Name: Javaid Qazi

Title-Subject: [Filtered] OM Calibration standard Z direction

Question: I am looking for a Z direction Calibration standard for an optical
microscope which can do surface profiles, mag ranges from 20 to 1000x.

Please let me know offline what are my options.


Thanks

Javaid


---------------------------------------------------------------------------

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From: richard-at-torland.demon.co.uk
Date: Sat, 10 Mar 2007 06:22:29 -0600
Subject: [Microscopy] Re: TEM: Free lens control on a JEOL 2011

Contents Retrieved from Microscopy Listserver Archives
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Hi Richard

as Steve points out the OL is turned off in LOW MAG mode. In this case
you use the SAD aperture for contrast not the OL aperture.

Low mag is one of the strengths of this machine.

In Mag Mode if you cannot get good images below 100k you should use
different alpha angles, alpha 3 for the low end and alpha 1 for high
mag, high resolution. This allows you to control beam divergence to suit
the magnification,

Best Regards

Richard
/_____________________________________________________________________________________/
//
/Richard Hey Principal Technical Support Engineer/
/Jeol (UK) Ltd/
//
/Phone: +44 1707377117/
/Fax: +44 1707373255/



protrain-at-emcourses.com wrote:
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} Hi
}
} I have not used the JEOL 2011 but it is a TEM so it must follow standard TEM
} principles.
}
} Instruments usually switch off the objective lens to achieve very low
} magnifications. They use the diffraction lens to focus and gain some
} contrast through the inclusion of the intermediate or diffraction aperture.
}
} Try switching off the objective (some drop to 20% rather then switch off)
} and use the diffraction lens to focus. Balance the remaining lenses to
} reduce distortion if this arrangement causes problems. Introduce the
} diffraction aperture once you have a reasonable image.
}
} The image quality will not be good, probably in excess of 3nm resolution,
} due to the very long focal length required.
}
} Best of luck but if you need more help I am only in Buckingham?
}
} Steve Chapman
} Protrain for EM training & consultancy world wide
} www.emcourses.com
} Tel +44 1280 816512 Fax +44 1280 814007
} Mobile +44 7711 606967
}
}
}
}
} ----- Original Message -----
} X-from: {richard.beanland-at-bookham.com}
} To: {protrain-at-emcourses.com}
} Sent: Wednesday, February 21, 2007 11:56 AM
} Subject: [Microscopy] TEM: Free lens control on a JEOL 2011
}
}
}
} }
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} }
} } Dear list readers,
} } Having struggled with my 'new' microscope for a few years now I
} } am reaching the limits of my knowledge. I am looking at relatively
} } large GaAs devices (} 100um in diameter) and need to be able to take
} } diffraction contrast images of the whole thing. The 2011 is great at
} } magnifications } 100,000x but if I try to get an image at 100x all I see
} } is a tiny bright spot corresponding to the objective aperture. I
} } suspect this means that the objective aperture is nowhere near the back
} } focal plane of the objective lens in low mag mode. Now, I know the kind
} } of image I want was easy to get on my 1979 vintage 120CX, with a 2-stage
} } condenser and one objective lens, whereas this beast has a three stage
} } condenser plus a condenser and objective mini-lenses.
} } This morning I managed to get a reasonable low mag diffraction
} } contrast image by playing with the free lens controls, (essentially
} } turning off some lenses so it behaved more like my old machine). My
} } question is: has anyone done this in a more systematic manner and could
} } give me some directions on which lenses to vary to get what I want? I
} } could just about work it out myself with 3 lenses but I have no idea
} } when there are 5. Not to mention 2 more in the gun, 3 intermediates and
} } a projector, plus alignment lenses...
} }
} } Many TIA
} }
} } Richard
} }
} } ________________________________________
} } Richard Beanland
} } Materials Analysis
} } Bookham
} } Caswell
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From: W8KXR-at-neo.rr.com
Date: Sat, 10 Mar 2007 07:05:35 -0600
Subject: [Microscopy] LM Mecury Burner data - Thanks -

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html


Gents and Ladies,

Quick note of thanks to those who provided data and advice on power
supply requirements for the HBO 50 Mercury burner. I now have enough
info to build a power supply and am in the search mode for components.

Again, thanks for the help..

Best Regards,

Gene

==============================Original Headers==============================
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From: jquinn-at-www.matscieng.sunysb.edu
Date: Sat, 10 Mar 2007 14:06:16 -0600
Subject: [Microscopy] Carbon evaporation coaters

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Paul and listservers:

Duniway sells L-gaskets for Bell Jars.
As does Kurt J. Lesker, NeVac, Huntington,
Key High Vacuum, MDC, CalSeal, GreatGlass, etc.....

regards,

Jim


} From mail-at-ns.microscopy.com Fri Mar 9 14:55:36 2007
} Date: Fri, 9 Mar 2007 14:03:48 -0600
} To: jquinn-at-www.matscieng.sunysb.edu
} From: beaurega-at-westol.com
} Reply-to: beaurega-at-westol.com
} X-Resent-From: "Microscopy Listserver" {microscopy-at-microscopy.com}
} Subject: [Microscopy] Re: Carbon evaporation coaters
} Errors-To: MicroscopyListSpamFilter-at-microscopy.com
} X-lewp: MicroscopyListSpam NAGS
}
}
}
}
} ----------------------------------------------------------------------------
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} ----------------------------------------------------------------------------
}
} Hi,
}
} Check out Ladd Research for a free standing evaporator for a lot less than
} $55K.
} http://www.laddresearch.com
}
} FYI: Ladd Research was the only manufacturer or supplier of a rubber L
} gasket with a large lip on the bottom to hold the older and thicker walled
} glass bell jars. I tried 5-8 suppliers.
} They also supplied me with custom made leads on their dual evaporation unit
} for retrofitting to my Cooke thermal boat evaporator. I would ask any
} supplier about carbon tread flash evaporations and/or accessories.
}
} Disclaimer: I am just a satified customer that got great customer support
} and products.
}
} Paul
}
} At 09:32 AM 3/9/07 -0600, you wrote:
} }
} }
} }
} } ----------------------------------------------------------------------------
} } The Microscopy ListServer -- CoSponsor: The Microscopy Society of America
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} } ----------------------------------------------------------------------------
} }
} } A colleague recently told me that a carbon evaporation coater (for
} } sem/epma samples) now lists for over ~US$55K (full scale model-not
} } tabletop, with diffusion pump, no thickness monitor). This is
} } essentially the same unit that I purchased 13 years ago for ~$12K.
} }
} } Does anyone have any idea why the price for such a unit has increased
} } by } 400% in 13 years? Are there still "simple full scale" (not
} } tabletop) models that sell at more "reasonable" prices? (He asked me
} } if I thought an NSF proposal reviewer would look askance as such a
} } high cost of a coater in a proposal...)
} }
} } Thanks.
} }
} } John
} } --
} } ========================================================
} } John Fournelle, Ph.D. office: (608) 262-7964 cell: (608) 438-7480
} } Cameron Electron Microprobe Lab lab: (608) 265-4798
} } Dept of Geology & Geophysics fax: (608) 262-0693
} } University of Wisconsin home: (608) 274-2245
} } 1215 West Dayton St. email: johnf-at-geology.wisc.edu
} } Madison, WI 53706 amateur radio: WA3BTA
} } Personal http://www.geology.wisc.edu/~johnf/
} } Probe lab http://www.geology.wisc.edu/~johnf/sx51.html
} } Probe Sign Up Calender:
} } http://www.microscopy.wisc.edu/cgi-bin/calendar/microprobe/calendar.cgi
} }
} } "The first rule of all intelligent tinkering is to save every cog and
} } wheel." -- Aldo Leopold
} }
} } "For a successful technology, reality must take precedence over
} } public relations, for Nature cannot be fooled." -- Richard P.
} } Feynman
} }
} } ==============================Original Headers==============================
} } 6, 24 -- From johnf-at-geology.wisc.edu Fri Mar 9 09:31:20 2007
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==============================Original Headers==============================
8, 12 -- From jquinn-at-www.matscieng.sunysb.edu Sat Mar 10 14:06:16 2007
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8, 12 -- Date: Sat, 10 Mar 2007 14:57:49 -0500
8, 12 -- From: Jim Quinn {jquinn-at-www.matscieng.sunysb.edu}
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8, 12 -- Subject: Re: [Microscopy] Re: Carbon evaporation coaters
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From: donc-at-asmicro.com
Date: Sat, 10 Mar 2007 22:15:17 -0600
Subject: [Microscopy] T, C, CS and other mounts

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

I browsed with interest the links mentioned recently concerning digital
camera adapters for photomicrography. On the vendor web pages, I see
mentioned T-mount, C-mount, CS-mount etc. Can anyone point me to a source
that defines the standard dimensions of various camera mounts such as these?

regards,
Don Chernoff
==================================
Advanced Surface Microscopy, Inc. E-Mail: donc-at-asmicro.com
3250 N. Post Rd., Ste. 120 Voice: 317-895-5630
INDIANAPOLIS IN 46226 USA Toll free: 800-374-8557 (in USA & Canada)
web: http://www.asmicro.com Fax: 317-895-5652
[business activities: analytical services in AFM, AFM probes, consulting,
training,
calibration and test specimens, calibration and measurement software,
used NanoScope equipment.]



==============================Original Headers==============================
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From: Michal.Jarnik-at-fccc.edu
Date: Mon, 12 Mar 2007 09:12:18 -0500
Subject: [Microscopy] Nucleolar markers - antibodies for TEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Dear Listers,

A colleague needs to label nucleoli in mouse thymus and so far I was not
able to find a good antibody (tried a couple). I will be using Tokuyasu
cryosections fixed with 6% formaldehyde. I would prefer commercially
rabbit polyclonal antibody against something really abundant
(fibrillarin, nucleolin or...?). Any tips?

Thanks,

Michal


==============================Original Headers==============================
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From: edelmare-at-muohio.edu
Date: Mon, 12 Mar 2007 09:51:47 -0500
Subject: [Microscopy] Re: T, C, CS and other mounts

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Don:

A quick internet search showed the following:

http://www.k3pgp.org/ccsmount.htm

What is the Difference Between C & CS Mount lens?

The physical difference is the CS mount lens is designed to be
mounted ~5mm closer to the image sensor than a C mount lens. (C-mount
lenses are designed to be mounted 17.526mm in front of the image
sensor vs. 12.5mm for CS-mount.) You can always use a C mount lens on
a CS mount camera by using a 5mm spacer ring (many cameras now have
C/CS selectable adjustment screws or rings). You can never use a CS
mount lens on an older style C mount camera unless you are willing to
physically modify the camera. Cost wise the CS mount lens is much
less expensive since it uses fewer glass elements. Quality of image
is the same. C mounts are becoming less and less popular and are
generally only used on the more telephoto focal lengths such as 25,
50 and 75mm, and bigger zooms.

Both the C and CS mount are 1 inch wide (25.4mm) with 32 threads per
inch (0.03125 inches or 0.79375mm). This dimension comes in handy if
you need to insert a spacer to obtain proper focus. Unscrew the lens
(or unscrew the camera from the mount in the case of telescope use
and count the turns until proper focus is obtained. Multiply the
above dimension by the number of turns to obtain the needed spacer or
washer. (Washers are sometimes used as spacers if there are enough
threads available.) Example: 1.25 turns x 0.79 mm = 0.9875 or ~1 mm.
Many cameras (especially newer ones) have set screws to allow small
adjustments in the distance between the lens and the image sensor.

AND

Definitions of CS-MOUNT on the Web:

* A relatively new industry standard for mounting a lens to a
camera where a 1" X 32 thread is employed and the distance from the
image plane from the shoulder of the lens is 12.52mm. A CS-mount lens
may NOT be used on a C-mount camera.
www.cbcamerica.com/cctvprod/glossary.htm

* "CS-mount" lenses have a flange back distance of 12.5mm vs.
17.526mm for "C-mount" lenses. Because of the shorter back focal
distance, CS-mount lenses can only be used on CS-mount cameras. Your
picture will be out of focus if you use a CS-mount lens on a C-mount
camera.
www.rainbowcctv.com/tech/lensterm.html

T-MOunt

(http://photonotes.org/cgi-bin/entry.pl?id=Tmount)

T-mount.

A threaded (screwmount) lens mount system developed by Tamron for
use with older manual focus lenses and still commonly seen today on
telescope to camera adapters (prime focus photography).

T-mounts are 42mm in diameter with a 0.75 mm thread pitch. They
are thus not compatible with M42 mounts with their 1mm thread pitch,
though they may look the same. You can cause damage to your equipment
if you try to mate the wrong sized components. The "T" stands for
Tamron and not telescope.

cf. astrophotography, M42, prime focus, thread pitch.




On 10 Mar 2007 at 22:16, donc-at-asmicro.com wrote:

}
}
}
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} ----------------------------------------------------------------------------
}
} I browsed with interest the links mentioned recently concerning digital
} camera adapters for photomicrography. On the vendor web pages, I see
} mentioned T-mount, C-mount, CS-mount etc. Can anyone point me to a source
} that defines the standard dimensions of various camera mounts such as these?
}
} regards,
} Don Chernoff
} ==================================
} Advanced Surface Microscopy, Inc. E-Mail: donc-at-asmicro.com
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Richard E. Edelmann, Ph.D.
EXPO Editor, Microscopy and Microanalysis Supplement
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu



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From: rcommon-at-msu.edu
Date: Mon, 12 Mar 2007 10:23:54 -0500
Subject: [Microscopy] LR White polymerization

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html


I am new to LR White. The instructions for "Electron Microscopy" strongly
recommends curing 20-24 hrs at 60 degrees plus or minus 2 degrees and warns
of over brittle blocks if this is not followed. But the instructions for
"Electron Microscopic Immunocytochemistry" recommends 50 degrees for 24
hours. My clients want LR White embedding for immunogold staining. I would
appreciate feedback from regular users as to what temperature and curing
time they use. Thanks.

Ralph Common
Michigan State University
Dept. of Physiology


==============================Original Headers==============================
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From: David.Patton-at-uwe.ac.uk
Date: Mon, 12 Mar 2007 10:34:59 -0500
Subject: [Microscopy] LR White polymerization

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

We got it to polymerise at 52-53 degrees for 24hrs. Worth trying 50
degrees with a blank block. We did not notice any sectioning problems.

dave

-----Original Message-----
X-from: rcommon-at-msu.edu [mailto:rcommon-at-msu.edu]
Sent: 12 March 2007 15:28
To: David Patton


I am new to LR White. The instructions for "Electron Microscopy"
strongly
recommends curing 20-24 hrs at 60 degrees plus or minus 2 degrees and
warns
of over brittle blocks if this is not followed. But the instructions
for
"Electron Microscopic Immunocytochemistry" recommends 50 degrees for 24
hours. My clients want LR White embedding for immunogold staining. I
would
appreciate feedback from regular users as to what temperature and curing
time they use. Thanks.

Ralph Common
Michigan State University
Dept. of Physiology


==============================Original
Headers==============================
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From: lcgould-at-med.cornell.edu
Date: Mon, 12 Mar 2007 10:48:23 -0500
Subject: [Microscopy] Re: LR White polymerization

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

I polymerize LRW at 50 deg. C for immuno-gold labelling. It cuts
nicely and has good beam stability.
Lee
--
Leona Cohen-Gould, M.S.
Sr. Staff Associate
Director, Electron Microscopy & Histology Core Facility
Manager, Optical Microscopy Core Facility
Weill-Cornell Medical College

voice (212)746-6146
fax (212)746-8175
http://www.cornellcelldevbiology.org
http://www.cornellbiochem.org

==============================Original Headers==============================
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From: kraftpiano-at-gmail.com
Date: Mon, 12 Mar 2007 11:11:14 -0500
Subject: [Microscopy] SEM Specimens.

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

This is a call out to all who might have spare specimens laying around.

We are a middle and high school with an SEM but no sample preparation
equipment. So, until we can get some, I am asking for anyone who may
have some spare samples that they are finished with (Biologicals
especially this year! I would really like a specimen of a neuron of
some variety to show the structure in 3D) or that are hanging around
if they could send them our way so I can have a library of specimens
to use in demonstrations. I can adapt any mount to our mount.

Please email me off list if you have something that you would be
wiling to part with.

Thanks,

Justin A. Kraft
Director
Center for Inquiry-Based Science Education

==============================Original Headers==============================
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From: a.d.mckinnon-at-abdn.ac.uk
Date: Mon, 12 Mar 2007 12:09:27 -0500
Subject: [Microscopy] LR White polymerization

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html


Hi Ralph,

Worthwhile bearing in mind the possibility of protein/antigen extraction
during long infiltration periods in LR White and during slow
polymerization at 50 degrees.

I (and others) have found that using LR White accelerator (1.5ul per ml)
and immersing the molds in a crushed ice slush to be a better means of
minimizing crosslinkage of the resin and thereby optimizing antibody
access to the antigen.

A full description of this method and rational can be found in my
immunogold review article in the Journal of Histotechnology/ vol 16, no
3/ Sept 1993.

Get back to me if you have difficulty in accessing this and want further
details.

Regards,

Alastair
Alastair McKinnon
Histology & EM Facility Manager
University of Aberdeen, Institute of Medical Science
Foresterhill, Aberdeen, AB25 2ZD
tel: +44(0)1224 552923 (office); +44(0)1224 555911 (lab)
fax: +44(0)1224 559533; email: a.d.mckinnon-at-abdn.ac.uk
www.abdn.ac.uk/ims/h-em
-----Original Message-----
X-from: rcommon-at-msu.edu [mailto:rcommon-at-msu.edu]
Sent: 12 March 2007 15:28
To: Mckinnon, Alastair D.


I am new to LR White. The instructions for "Electron Microscopy"
strongly recommends curing 20-24 hrs at 60 degrees plus or minus 2
degrees and warns of over brittle blocks if this is not followed. But
the instructions for "Electron Microscopic Immunocytochemistry"
recommends 50 degrees for 24 hours. My clients want LR White embedding
for immunogold staining. I would appreciate feedback from regular users
as to what temperature and curing time they use. Thanks.

Ralph Common
Michigan State University
Dept. of Physiology


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From: DusevichV-at-umkc.edu
Date: Mon, 12 Mar 2007 13:39:25 -0500
Subject: [Microscopy] Re: AskAMicroscopist: analysis of paper

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Paper is one of my favorite specimens (the other two are insects and
glass) for the initial demonstration of SEM capabilities to students. It
always has a beautiful structure whether coated or non-coated (observed
in low voltage or environmental mode), and it is very easy to handle.
So, I do not understand why for you "grey scale differences were to
low". If you can send me your images off-line we could discuss them in
more detail.

Vladimir

Vladimir M. Dusevich, Ph.D.
Electron Microscope Lab Manager
371 School of Dentistry
650 E. 25th Street
Kansas City, MO 64108-2784

Phone: (816) 235-2072
Fax: (816) 235-5524
Web: http://www.umkc.edu/dentistry/microscopy


}
} Email: greta.rennings-at-web.de
} Name: Greta Rennings
}
} Organization: KU Leuven
}
} Education: Graduate College
}
} Location: Leuven, Brabant, Belgium
}
} Question: Dear ladies and gentlemen,
}
} do you have an idea which microscopic technique would be suitable for
} analysis of paper?
} Firstly for 3D I did trials with CLSM, which were not truly successful

} as grey scale differences were too low. Other techniques I know would
} require splitting or sectioning, as far as I know- do you have further

} experience?
} Secondly for 2D I tried light microscopy and SEM, but grey scale
} differences were to low here too in order to differentiate between
} components. Could TEM be useful? What could help to get better
} distinguishable features?
}
} Thank you very much in advance for your support!
} Kind regards,
} Greta
}
} --------------------------------------------------------------
} -------------
}
} ==============================Original
} Headers==============================
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From: edelmare-at-muohio.edu
Date: Mon, 12 Mar 2007 15:03:53 -0500
Subject: [Microscopy] Re: EM Field sources

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Once again the list comes through with very valuable information.
Thank you, everyone.

I do not have the answer yet, but as several folks asked when I come
to some conclusions I will post back to the list.


Richard E. Edelmann, Ph.D.
EXPO Editor, Microscopy and Microanalysis Supplement
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu


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From: gary-at-gaugler.com
Date: Tue, 13 Mar 2007 00:50:44 -0500
Subject: [Microscopy] Re: SEM Specimens.

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Good luck.

I have solicited similar requests and will pay for them.

The well is dry.

gary g.


At 08:12 AM 3/12/2007, you wrote:
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America


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From: nizets2-at-yahoo.com
Date: Tue, 13 Mar 2007 02:59:37 -0500
Subject: [Microscopy] Re: mosquito by SEM - better late than never

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Sorry to reply so late but my private life took most
of my time lately (no I was not in vacations ;-)).
I just wanted to warmly thank all those who
contacted me or replied to my query and apologize in
the case I did not send a personal reply to everybody.

Stephane




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From: Pamela.Lloyd-at-WPAFB.AF.MIL
Date: March 28, 2007
Subject: [Microscopy] MSORV Spring Meeting

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

MSORV (the Microscopy Society of the Ohio River Valley) is having their
Spring Meeting on Wednesday, March 28, 2007 in Dayton, OH. The group
has been in an "inactive status" for over 3 years and this will be their
first meeting since the Fall of 2003. This first meeting is going to be
shorter than normal (4 hours) beginning with a mixer/networking social
hour, a Business meeting to discuss what direction and shape the society
will take, and two talks. The Agenda is below. If you have questions
or would like to be placed on our e-mail list to receive directions etc.
please contact either myself or Dave Tomlin. Our e-mail addresses are:
pamela.lloyd-at-wpafb.af.mil or david.tomlin-at-wpafb.af.mil.

Spring MSORV Meeting
Location: UES, Inc.
4401 Dayton-Xenia Rd. Dayton, OH 45432

AGENDA
*3-4 PM Opening Events:

Registration and Membership Applications
Mixer (Sponsored by JEOL, Ltd.)

*4-5 PM Business Meeting:

MSORV:
Role and Value of a Local Society
Needs and Concerns of Members
Format of Future Meetings
Treasurer's Report: Dave Tomlin (UES / WPAFB)
Chair: Matt Chestnut (Procter & Gamble)

*5-7 PM Scientific Presentations:

"WDS X-ray Analysis with Parallel Beam Spectrometers on
Scanning Electron Microscopes" - Alan
Sandborg (EDAX)

"Frontiers in Microscopy for Biological Specimens" -
Wally Ip and Bob Hennigan (UC Medical School)




Pamela F. Lloyd
Materials Engineer
UES, Inc.
AFRL/MLPJE
Bldg. 651, Room 82
3005 Hobson Way
WPAFB, OH 45433
Tel: 937-255-9413
Fax: 937-656-7292
e-mail: pamela.lloyd-at-wpafb.af.mil



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From: rcommon-at-msu.edu
Date: Tue, 13 Mar 2007 10:14:51 -0500
Subject: [Microscopy] LR White polymerization

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Many thanks to everyone who replied, on or off-line, to my question about LR
White polymerization. Most agreed that LR White polymerizes well at 50
degrees in 24 hours, and that sectioning and beam stability are good. There
were, however, some interesting variations suggested. One respondent uses
microwave polymerization. Another uses UV polymerization at 4 degrees.
Another suggested that polymerization at 37 degrees for 3 days might reduce
loss of antigenicity. Several people emphasized the importance of excluding
oxygen and using gelatin capsules when using heat to polymerize, and one
suggested degassing the resin prior to use.

The most interesting suggestions involved using the "cold cure" method. The
instructions that come with the LR White kit recommend not using this method
for immunogold because the exothermic reaction can heat the resin above 60
degrees. But Dr. McKinnon (J. Histotechnology 1993: 16(3)) and others
report superior results with the cold method. Apparently, if the resin can
be kept cold during curing, the low temperature and shorter curing time
reduce loss of antigenicity.

A newer protocol using PTA during processing was also suggested. See Arch
Histol Cytol 68 (5), 337-347 (2005).

Ralph Common
Michigan State University
Dept. of Physiology


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From: DusevichV-at-umkc.edu
Date: Tue, 13 Mar 2007 10:45:45 -0500
Subject: [Microscopy] AskAMicroscopist: analysis of paper

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} -----Original Message-----
} From: Peter Tomic [mailto:peter.tomic-at-renwireless.com]
} Sent: Monday, March 12, 2007 1:57 PM
} To: Dusevich, Vladimir
} Subject: Re: [Microscopy] Re: AskAMicroscopist: analysis of paper
}
} Vladimir,
}
} Just out of curiosity, what do you find interesting about glass?
} Fracture surfaces?
}
} Best regards,
}
} Peter Tomic

For my first demonstration of SEM for students I start usually with
insects. They are supermodels, divas of SEM imaging, they unfailingly
get students excited and prepare them to consume information. Then comes
paper. Nice images of fibers, difference in morphology of writing paper
and filter paper, analysis of filler particles with BSE and EDS. Then I
use three pieces of glass (coverslips): one clean (coated), one "washed"
with tap water and air dried (coated) and one not coated.

On clean glass I start with focusing on dust particle, then move to a
place without any particles, and students are somewhat surprised to see
that there are nothing to look at: just dull monitor with the same
brightness all over. So, I have to remind them, that when we look at
glass with our eyes we do not see any features of its surface, but just
light reflections. It is a good starting point for a brief discussion of
a probe (whether electron beam or light) interaction with specimen and
dependence of a resulting signal on topography.

On "washed" glass students can see a lot of crystals of salts. It leads
to discussion of artifacts in microscopy and importance of proper
specimen preparation.

Not coated glass, of course, is good for demonstration of charging.
Different levels of charging - at 15 kV, when all we see are artifacts,
and at 500 V, when we can get pretty decent image of glass surface (with
dust particles). Finally I demonstrate the extreme case of charging. I
switch off beam, move to a not charged (not previously observed) place
on glass, set high voltage at 15-25 kV and scanning to a spot mode, turn
beam on and charge glass for a few seconds. Then I set voltage to 2-5 kV
and get image of a specimen chamber. Really nice "fish eye" view of a
specimen chamber with an eye in a place of a specimen. I can change
magnification, move image, focusing on some details, such as detectors,
wires, etc. Students, seeing that with simple manipulations we converted
our specimen in a device for observation of specimen chamber, get
excited again, almost as much as when seeing insects. And excitement, I
believe, really helps to remember lesson.

Vladimir

Vladimir M. Dusevich, Ph.D.
Electron Microscope Lab Manager
371 School of Dentistry
650 E. 25th Street
Kansas City, MO 64108-2784

Phone: (816) 235-2072
Fax: (816) 235-5524
Web: http://www.umkc.edu/dentistry/microscopy



} DusevichV-at-umkc.edu wrote:
} }
} ----------------------------------------------------------------------
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} }
} } Paper is one of my favorite specimens (the other two are insects and
} } glass) for the initial demonstration of SEM capabilities to
} students.
} } It always has a beautiful structure whether coated or non-coated
} } (observed in low voltage or environmental mode), and it is
} very easy to handle.
} } So, I do not understand why for you "grey scale differences were to
} } low". If you can send me your images off-line we could
} discuss them in
} } more detail.
} }
} } Vladimir
} }
} } Vladimir M. Dusevich, Ph.D.
} } Electron Microscope Lab Manager
} } 371 School of Dentistry
} } 650 E. 25th Street
} } Kansas City, MO 64108-2784
} }
} } Phone: (816) 235-2072
} } Fax: (816) 235-5524
} } Web: http://www.umkc.edu/dentistry/microscopy
} }
} }
} } } Email: greta.rennings-at-web.de
} } } Name: Greta Rennings
} } }
} } } Organization: KU Leuven
} } }
} } } Education: Graduate College
} } }
} } } Location: Leuven, Brabant, Belgium
} } }
} } } Question: Dear ladies and gentlemen,
} } }
} } } do you have an idea which microscopic technique would be
} suitable for
} } } analysis of paper?
} } } Firstly for 3D I did trials with CLSM, which were not truly
} } } successful
} }
} } } as grey scale differences were too low. Other techniques I
} know would
} } } require splitting or sectioning, as far as I know- do you have
} } } further
} }
} } } experience?
} } } Secondly for 2D I tried light microscopy and SEM, but grey scale
} } } differences were to low here too in order to differentiate between
} } } components. Could TEM be useful? What could help to get better
} } } distinguishable features?
} } }
} } } Thank you very much in advance for your support!
} } } Kind regards,
} } } Greta
} } }
} } } --------------------------------------------------------------
} } } -------------
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From: jd-at-laddresearch.com
Date: Tue, 13 Mar 2007 12:07:00 -0500
Subject: [Microscopy] Re: Carbon evaporation coaters

Contents Retrieved from Microscopy Listserver Archives
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There are several U.S. manufacturers of floor model (full scale with
diffusion pump) vacuum evaporators and I'd be surprised if they cost
anywhere close to 55K.

The Ladd digital vacuum system, complete with mechanical and
diffusion pumps built in sells for less than 20K. In fact you could
add a turbo and quartz thickness monitor and still be only about 30K.

In the 1960's when we started building our original vacuum systems
the price was about 6K so they really haven't increased that much in 40 years.

John Arnott

Ladd Research
83 Holly Court
Williston, VT 05945

On-line Catalog: www.laddresearch.com

Telephone: 1-802-658-4961 (anywhere)
Toll Free 1-800-451-3406 (US)
Fax: 1-802-660-8859

e-mail: sales-at-laddresearch.com

Disclaimer: Ladd Research sells microscopy supplies and accessories
including vacuum evaporation systems .






---- Original Message ----- From: {beaurega-at-westol.com}
Sent: Friday, March 09, 2007 4:04 PM






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From: bozzola-at-siu.edu
Date: Tue, 13 Mar 2007 16:14:49 -0500
Subject: [Microscopy] Re: Carbon Evaporation Coaters

Contents Retrieved from Microscopy Listserver Archives
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Some evaporation (Brand X) units are quite expensive. I remember
pricing a Brand X evaporator several years ago and nearly passed out
when the quotation came back (over $30K). We decided to keep our
nearly 40 yr old (yet still serviceable) Brand X unit that was
purring alongside our 35 yr old Ladd unit (that cost around $8K). (We
needed two units since one was used for ultraclean evaporative work
and the other by trainees.)

As an aside: several months after I took my first job in Philadelphia
(in 1976), an enormous wooden box arrived in my laboratory. After
unpacking it, I discovered a Ladd evaporator that Margaret Ladd had
kindly sent for me to "try out" for several months (no strings
attached). After 6 months, I passed it along to another investigator.
That certainly made a lasting impression on me. To this day, I have
no idea how she found out that I was a microscopist working at The
Medical College of Pennsylvania. I've never had such an offer since
then.

--
##############################################################
John J. Bozzola, Ph.D., Director
I.M.A.G.E. (Integrated Microscopy & Graphics Expertise)
750 Communications Drive - MC 4402
Southern Illinois University
Carbondale, IL 62901 U.S.A.
Phone: 618-453-3730
Email: bozzola-at-siu.edu
##############################################################

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From: Jerry.L.Lehman-at-NXP.com
Date: Tue, 13 Mar 2007 18:50:16 -0500
Subject: [Microscopy] [FilterviaWWW: Position Available: Failure Analysis Engineer

Contents Retrieved from Microscopy Listserver Archives
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This Question/Comment was submitted to the Microscopy Listserver
using the WWW based Form at http://microscopy.com/MicroscopyListserver/MLFormMail.html
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Email: Jerry.L.Lehman-at-NXP.com
Name: Jerry L. Lehman

Organization: NXP Semiconductors

Title-Subject: [Filtered] Position Available: Failure Analysis Engineer

Question: NXP Semiconductors (Formerly Philips Semiconductors) is expanding its FA Department and is advertising the following position (Job # 2088) at Fishkill, NY, USA:

Job Responsibilities:
ï Physical and electrical failure analyses and reporting of analogue and digital circuit IC¥s
ï Support of design, yield and reliability improvements for products and processes
ï Support of development projects
ï Support of quality initiatives including automotive/zero defect
ï Procedurization and continuous improvement of analysis methods


Experience Profile:
Bachelor/ Master Degree in Electrical Engineering, Materials Science, Communication Engineering, Electronics or Physics
ï Detailed knowledge in semiconductor physics and technology, analogue and digital signal processing and communication engineering
ï 1-2yrs internship or other experience in Failure Analysis
ï Some knowledge of TEM and/or FIB is a plus
ï Fluent English conversation and writing
ï Good knowledge in standard office tools
ï Excellent analytical reasoning, communication skills, and organizational skills
ï Team oriented, customer-centric quality mindset

If interested, please submit your resume thru the following link: http://www.nxp.com/jobs/search/index.html and search by JOB ID # 2088


---------------------------------------------------------------------------


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From: marissagowrie-at-yahoo.com
Date: Tue, 13 Mar 2007 18:50:44 -0500
Subject: [Microscopy] viaWWW: Preparing Pollen Grains for Electron Microscopy

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Email: marissagowrie-at-yahoo.com
Name: Marissa Gowrie

Organization: University of the West Indies St. Augustine

Title-Subject: [Filtered] Preparing Pollen Grains for Electron Microscopy

Question: Hello, I am a post graduate student at the University presently studying the transport of pollen grains in dust. I have been using the Burkard 7 day Spore Sampler to trap the pollen grains and stain them for viewing under the light microscope. I am presently exploring taking electron micrographs of the pollen grains but this would require removing the grains from the greased melinex tape of the sampler and mounting it onto the swab. I have come across the acetolysis process but this does not involve the removal of the pollen grain off the greased melinex tape. Does anyone know of a technique that can be used to remove the pollen from the tape (by dissolving the tape perphaps?) so that they can be placed on the swab?
I look forward to your feedback. Thanks
Marissa

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From: AMCGroup2-at-aol.com
Date: Tue, 13 Mar 2007 18:51:18 -0500
Subject: [Microscopy] viaWWW: TEM image cataloging-archiveing software

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Email: AMCGroup2-at-aol.com
Name: Jim Glossinger

Organization: AMC Group

Title-Subject: [Filtered] TEM image cataloging-archiveing software

Question: Dear all,

We are currently evaluating multi-user, multi-location access Linux-based software products for cataloging-archiving our TEM image database.

Your input is greatly appreciated.

Regards,

Jim Glossinger, Ph.D.
Principal Scientist
AMC Group

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From: kraftpiano-at-gmail.com
Date: Tue, 13 Mar 2007 21:41:43 -0500
Subject: [Microscopy] SEM: Coater home-brew?

Contents Retrieved from Microscopy Listserver Archives
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First of all, thank you to everyone who has replied with offers of
specimens! You guys are fantastic!

Now the fun bit:

I was sorting through a closet, and I found the Denton Desk II Carbon
Accessory I have (I believe I offered it up in a previous post as
trade for something useful...)

Anyway, I was wondering if there were a way to use this to do some
carbon coating without the Denton Desk II Base unit. It's got the
power supply, and I can fashion a chamber of some sort over the
business end, but can it be done? I have an ample supply of carbon
rods that came with it.

--Justin A. Kraft
Director
Center for Inquiry-Based Science Education

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From: gary-at-gaugler.com
Date: Tue, 13 Mar 2007 22:46:56 -0500
Subject: [Microscopy] Re: SEM: Coater home-brew?

Contents Retrieved from Microscopy Listserver Archives
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I'm puzzled by this.

I posted for specimens for payment and got no responses.

Should I have posted for them as free? I seek bio
specimens (bacteria, parasites) and I will pay for them.
I do not have CPD and HMDS, etc. capability. If free
is better and more successful than paid, let me know.

gary g.


At 06:43 PM 3/13/2007, you wrote:




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From: jzheng-at-uci.edu
Date: Tue, 13 Mar 2007 23:09:09 -0500
Subject: [Microscopy] best supporting film for protein TEM

Contents Retrieved from Microscopy Listserver Archives
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Hi, There,

This may be a simple question for those who are working on protein
observed by TEM. What is the best supporting film for protein TEM work,
silicon monoxide grids or ultra thin carbon film grids? If you can tell me
the reason and the products your are using, it will be very helpful.
Thanks, Jeffery


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From: hyi-at-emory.edu
Date: Wed, 14 Mar 2007 00:17:31 -0500
Subject: [Microscopy] Workshop Announcement

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Dear Researchers:

Emory University School of Medicine Microscopy Core is hosting a
Cryo Technique and Immunogold labeling hands on workshop from Aug. 12
through Aug. 16. Here is some logistical information. Please
contact Hong Yi at hyi-at-emory.edu or (404) 712-8491 for more
information and registration procedure.

1. Date and Curriculum

Aug. 12-13:
· Cryo-ultramicrotomy
· A new cryo-fixation method
· Set up for cryo-substitution
Aug. 14-16:
· The properties of gold particles and their protein conjugates.
· Theories underlying immunogold labeling protocols.
· Silver enhancement of gold particles
· Imunogold labeling on a variety of sample preparations for LM.
· Immunogold labeling for EM
a. Pre-embedding immunogold labeling using ultrasmall gold conjugates
and silver enhancement.
b. Post-embedding immunogold labeling using conventional colloidal
gold conjugates and ultrasmall gold conjugates.

Numerous biological microscopy techniques will be also
demonstrated during the workshop. Details TBA

2. Main Instructors and Sponsors

Dr. Jan Leunissen, Aurion
Mr. Helmut Gnägi, Diatome
Hong Yi, Emory University

Leica Microsystems
Aurion ImmunoGold Reagents
Electron Microscopy Sciences/Diatome
Hitachi High Technologies America, Inc

3. Fees

Session A: Cryo-technique: $500
Session B: Immunogold: $500
Session A and B: $800

Participants can sign up for either the entire workshop
or a particular session of the workshop. If desired, participants
who sign up for cryo-techniques will have additional practice time
after lectures and training during the first two days. Applicants
signing up for both sessions will be given first priority for
enrollment.

4. Participants

The enrollment is open to anyone with interest to learn
regardless of previous experience. However, due to limited space
availability, the number of participants will be limited to 12 for
the cryo-techniques and 20 for immunogold labeling.

5. Lodging

Participants are responsible for making hotel
reservation themselves. The workshop will block a number of rooms at
the following hotels

Villa International: (404) 633-6783, $24/night/person (double
occupancy), or $36/night/person (single occupancy)

This hotel is cozy and clean and often used by Emory to house
temporary or visiting employees. However, TV and phone are only
available in the hotel common room.

Emory Inn: (800) 933-6679, $107/night or higher


Hong Yi
Emory SOM EM

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From: reinhard.rachel-at-biologie.uni-regensburg.de
Date: Wed, 14 Mar 2007 04:59:55 -0500
Subject: [Microscopy] Re: best supporting film for protein TEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi Jeffery,
} What is the best supporting film for protein TEM work,
} silicon monoxide grids or ultra thin carbon film grids? If you can
} tell me
} the reason and the products your are using, it will be very helpful.

in our experience, the best film is a home-made carbon-film (evaporated
onto freshly cleaved mica sheets; by resistence evaporation or even
better by electron gun evaporation), and putting them onto 400 or 600
mesh copper grids.
Before applying the sample: glow-discharge the grid.

We have no experience with silicon monoxide grids.

best regards,
Reinhard Rachel

----------------------
PD Dr. Reinhard Rachel
Universitaet Regensburg
Centre for EM - NWF III -
Lehrstuhl fuer Anatomie
Universitaetsstr. 31
D-93053 Regensburg - Germany
tel +49 941 943 2837, 1720, 1666(TEM)
fax +49 941 943 2868
mail reinhard.rachel-at-biologie.uni-r.de
office: VKL 3.1.29



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From: frank.karl-at-degussa.com
Date: Wed, 14 Mar 2007 06:57:46 -0500
Subject: [Microscopy] Re: viaWWW: Preparing Pollen Grains for Electron Microscopy

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi Marissa,
I have to admit I'm a little surprised. When I was more active with pollen
collecting, I found Ronald Kapp's acetolysis method to dissolve/attack just
about everything accept the pollen exine wall! The problem, is after
acetolysis you can only compare those grains to reference grains which have
been prepared the same way. When I examine air dried pollen from dust, I
see that in many cases it's not a very good match to my acetolysis
collection or to the key in Kapp's book. Still, it's better than nothing.

Not being familiar with the system you are using I can't comment on
solvents, but I would try solvent, followed by dehydrating agents to remove
any water condensed from the evaporative cooling of the solvents and
compare those samples to air dried reference samples.

Have fun and let us know how it turns out for you.

stay safe............Frank





marissagowrie-at-yah
oo.com To: frank.karl-at-degussa.com
cc:
03/13/2007 07:52 Subject: [Microscopy] viaWWW: Preparing Pollen Grains for Electron Microscopy
PM
Please respond to
marissagowrie








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Email: marissagowrie-at-yahoo.com
Name: Marissa Gowrie

Organization: University of the West Indies St. Augustine

Title-Subject: [Filtered] Preparing Pollen Grains for Electron Microscopy

Question: Hello, I am a post graduate student at the University presently
studying the transport of pollen grains in dust. I have been using the
Burkard 7 day Spore Sampler to trap the pollen grains and stain them for
viewing under the light microscope. I am presently exploring taking
electron micrographs of the pollen grains but this would require removing
the grains from the greased melinex tape of the sampler and mounting it
onto the swab. I have come across the acetolysis process but this does not
involve the removal of the pollen grain off the greased melinex tape. Does
anyone know of a technique that can be used to remove the pollen from the
tape (by dissolving the tape perphaps?) so that they can be placed on the
swab?
I look forward to your feedback. Thanks
Marissa

---------------------------------------------------------------------------

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From: cgarber-at-2spi.com
Date: Wed, 14 Mar 2007 08:49:48 -0500
Subject: [Microscopy] TEM support films for "protein TEM work"

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Jeffrey Zheng wrote:
=====================================================
This may be a simple question for those who are working on protein
observed by TEM. What is the best supporting film for protein TEM work,
silicon monoxide grids or ultra thin carbon film grids? If you can tell me
the reason and the products your are using, it will be very helpful.
==================================================
There is a third option, that being the use of silicon nitride membrane
window grids, see URL
http://www.2spi.com/catalog/instruments/silicon-nitride-membrane-window-grids-slot-square.html
If you are not familiar with these grids, the above website page should
answer your questions.

The 20 or 30 nm thick membrane grids are used for this kind of work. At
that thickness, they are very electron transparent and have the added
advantage (over either silicon monoxide/silicon dioxide or ultra thin or
any other carbon filmed grids) of not having any grain structure to
interfere with the visualization of your protein samples.

Another advantage of the silicon nitride membrane window grids is that
there is no "grid sag" as would normally occur with any "filmed"
grid, be it silicon monoxide/silicon dioxide or carbon. With "sag",
one never knows for sure what really is the magnification, or putting it
another way, the sag introduces an error in any ultimate magnification
calculation. The membrane window grids however have outstanding
flatness and therefore (in comparison) no "sag" and this error in
magnification measurement can be eliminated.

Finally, the membrane window grids are inherently more stable in the
electron beam and one can expect lower numbers for image drift under
exposure to the electron beam.

Disclaimer: SPI Supplies offers a full range of silicon nitride and
silicon oxide membrane window grids so we would have a vested interest
in seeing more people using them. The information given above is
somewhat of a composite of what we have been told by present customers.

Chuck
==================================================
Charles A. Garber, Ph. D. Ph: 1-(610)-436-5400
President
SPI SUPPLIES FAX: 1-(610)-436-5755
PO BOX 656 e-mail: cgarber-at-2spi.com
West Chester, PA 19381-0656 USA Cust. Service: spi2spi-at-2spi.com


Look for us!
############################
WWW: http://www.2spi.com
############################
==================================================


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From: tivol-at-caltech.edu
Date: Wed, 14 Mar 2007 11:51:11 -0500
Subject: [Microscopy] Re: best supporting film for protein TEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html


On Mar 13, 2007, at 9:09 PM, jzheng-at-uci.edu wrote:

} This may be a simple question for those who are working on protein
} observed by TEM. What is the best supporting film for protein TEM work,
} silicon monoxide grids or ultra thin carbon film grids? If you can
} tell me
} the reason and the products your are using, it will be very helpful.
}
Dear Jeffery,
To an extent, the preferred support film is specimen and technique
dependent. For cryoEM of soluble proteins, a holey film is best, and
one images in the holes, so the image has no film in it. For cryoEM of
membrane proteins, the thin carbon evaporated on mica--either on a
fine-mesh grid or an underlying holey film--works well. I have not
compared the results using thin carbon to those using the Si compounds
Chuck Garber recommends. For negative stained specimens, a continuous
film is necessary, and formvar/carbon works well, since the stain
provides large contrast and the effect of the film is insignificant.
Yours,
Bill Tivol, PhD
EM Scientist
Electron Cryo-Microscopy Facility
Broad Center, Mail Code 114-96
California Institute of Technology
Pasadena CA 91125
(626) 395-8833
tivol-at-caltech.edu


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From: jd-at-laddresearch.com
Date: Wed, 14 Mar 2007 12:24:39 -0500
Subject: [Microscopy] Re: best supporting film for protein TEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi Jeffrey,

Without any additional information we would suggest you try the SiO
substrates. We produce a lot of SiO substrates and do not always
know how they are being used but, anecdotally we believe many of them
are being used for protein TEM work.

Are your samples protein crystals?

John Arnott

Ladd Research
83 Holly Court
Williston, VT 05945

On-line Catalog: www.laddresearch.com

Telephone: 1-802-658-4961 (anywhere)
Toll Free 1-800-451-3406 (US)
Fax: 1-802-660-8859

e-mail: sales-at-laddresearch.com

At 12:13 AM 3/14/2007, you wrote:



} ----------------------------------------------------------------------------
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From: jd-at-laddresearch.com
Date: Wed, 14 Mar 2007 12:29:12 -0500
Subject: [Microscopy] Re: best supporting film for protein TEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Sorry - I accidentally left off the following disclaimer from my
previous posting:
Ladd Research sells SiO substrates, carbon substrates, support films,
grids and associated products


Hi Jeffrey,

Without any additional information we would suggest you try the SiO
substrates. We produce a lot of SiO substrates and do not always
know how they are being used but, anecdotally we believe many of them
are being used for protein TEM work.

Are your samples protein crystals?

John Arnott

Ladd Research
83 Holly Court
Williston, VT 05945

On-line Catalog: www.laddresearch.com

Telephone: 1-802-658-4961 (anywhere)
Toll Free 1-800-451-3406 (US)
Fax: 1-802-660-8859

e-mail: sales-at-laddresearch.com

At 12:13 AM 3/14/2007, you wrote:



} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America


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From: marksmsa-at-gmail.com
Date: Wed, 14 Mar 2007 13:44:18 -0500
Subject: [Microscopy] EMMM2007, call for papers

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Dear colleague,

ELECTRON MICROSCOPY AND MULTISCALE MODELLING,
Moscow, Russia, September 3-7, 2007

http://www.crys.ras.ru/EMMM07/index.en.htm
EMAIL: emmm-07-at-ns.crys.ras.ru

submission of abstracts until 10 May 2007
reduced rate registration until 20 June 2007

This conference, sponsored by the International Union of Crystallography,
will bring together experts in methods of interrogating structures at nano-
and meso-scales, and multiscale materials modelling.

Topics of the conference include:

- electron diffraction imaging
- electron spectroscopy
- density functional methods
- structure of defects and dislocations
- dynamical properties of defects
- dislocation dynamics
- surfaces and defects on surfaces
- structure of grain boundaries
- atomistic modelling of diffusion of defects
- modelling microstructure on nano- and mesoscales
- imaging and spectroscopy of nanostructures
- magnetic effects in materials
- diffuse and small angle scattering
- charge density measurements
- advanced materials for power generation
- applications of electron microscopy
- neutron and X-ray diffraction methods

September is the best time for visiting the city of Moscow to enjoy
the numerous sights and attractions that it has to offer.

We are looking forward to welcoming you to EMMM-07

Prof. Anatoly Avilov
emmm-07-at-ns.crys.ras.ru

Vice Chair, Organizing Committee of EMMM-2007, Institute of
Crystallography, Russian Academy of Sciences, Leninsky Prospect,
Moscow, Russian Federation

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From: eschumacher-at-mccrone.com
Date: Wed, 14 Mar 2007 15:50:09 -0500
Subject: [Microscopy] Meeting: Midwest Microscopy and Microanalysis Society

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Greetings Colleagues,

The first 2007 meeting of the Midwest Microscopy and Microanalysis
Society, held jointly with the Biological Imaging Facility at
Northwestern University in Evanston, IL, will be held on Friday, March
23rd. Please follow the link below and click on Meetings for details of
the program and registration information. Note that the M3S website
address has changed:

www.midwestmicroscopy.org

We look forward to seeing you at this and future meetings.

Regards,

Elaine Schumacher
President, Midwest Microscopy and Microanalysis Society
Elaine-at-midwestmicroscopy.org



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From: schramv-at-mail.nih.gov
Date: Wed, 14 Mar 2007 18:18:05 -0500
Subject: [Microscopy] viaWWW: Zeiss workshop in Bethesda (MD) March 27 - 28

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http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

This Question/Comment was submitted to the Microscopy Listserver
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Email: schramv-at-mail.nih.gov
Name: Vincent Schram

Organization: NIH / NICHD

Title-Subject: [Filtered] Zeiss workshop in Bethesda (MD) March 27 - 28

Question: The NICHD Microscopy & Imaging Core is organizing with Carl Zeiss on March 27 and 28 a two-day workshop on deconvolution, long-term incubation and image analysis. The event will be held on the NIH Bethesda campus in Maryland. Anyone using or planning to use a conventional fluorescence microscope is invited to attend.

The workshop includes seminars held in B49 / rm 1A51 and equipment demonstration in B49 / rm 6C72. Please contact Ruth Redman (rredman-at-zeiss.com) to schedule time on the equipment.

The full program is below:


3/27- 10-11AM LECTURE: Wide field Optical Sectioning Techniques for Fluorescent Specimens: Structured Illumination with Apotome and 3D Deconvolution
Demonstrations of these techniques can be scheduled on a hourly basis from 11:30-4:30 that afternoon in B49 / rm 6C72.

3/28- 10-11AM LECTURE: High Speed Physiological Imaging and Analysis with Long Term Incubation
General demonstration immediately following

3/28 1-2PM LECTURE: Automated Image Analysis and Particle Tracking
You are invited to bring your own images for analysis following the lecture.

All lectures to be held in Bldg 49 Room 1A51


---------------------------------------------------------------------------

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From: stevem-at-vt.edu
Date: Wed, 14 Mar 2007 18:18:37 -0500
Subject: [Microscopy] viaWWW: position is open at Va Tech

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Email: stevem-at-vt.edu
Name: Stephen McCartney

Organization: VaTech University

Title-Subject: [Filtered] job posting

Question: The following position is open at Va Tech:

Research Associate/Senior Research Associate, Institute for Critical Technology & Applied Sciences.

Posting Number 070224

Operate instrumentation in the Nanoscale Characterization and Fabrication Laboratory. Maintain and operate the FEI Titan Transmission Electron Microscope (TEM) and the Helios Nanolab 600 Focused Ion Beam (FIB) in the NCFL.

Use this link, click on 'Search and Apply for Faculty Staff and Wage Positions' then use the above Posting number for more info.

http://www.hr.vt.edu/employment/

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From: mgb-at-ansto.gov.au
Date: Wed, 14 Mar 2007 22:58:32 -0500
Subject: [Microscopy] viaWWW: TEM aperture questions

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Email: mgb-at-ansto.gov.au
Name: Mark Blackford

Organization: ANSTO

Title-Subject: [Filtered] TEM aperture questions

Question: Hi All,

A colleague is developing a DigitalMicrograph script to help align
our JEOL 2010F TEM. This requires a selected area aperture which is
as close to circular as possible (better than 0.5%) to provide a
reference image.

Can anyone tell me how TEM apertures are manufactured?
How close to a perfect circle can they be made?

Cheers,

Mark Blackford

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From: mark.talbot-at-csiro.au
Date: Wed, 14 Mar 2007 23:26:28 -0500
Subject: [Microscopy] EM & LM Digital database

Contents Retrieved from Microscopy Listserver Archives
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Hi Paul,

I have exactly the same question. I am trying to find a database that
will coordinate the cataloguing of images from SEM, confocal and light
microscopes from a large number of regular and temporary users. The
software not only needs to catalogue the images but also accommodate
updateable links to electronic 'notebooks' which describe experimental
details and results (which can be accessed over a network and edited by
people associated with the project). It is also preferable to database
such things as linked PDFs (relevant literature) and data files such as
Excel spreadsheets.

I have so far not managed to find one single program that can do all of
this! There's a great database program called Pax-It, but this is a
little bit user-unfriendly (one important stipulation is that the
program needs to be user-friendly since it would be used by a large mix
of people with a gradation of computer literacy) and so far I can't see
any ability to database together with electronic notebooks. But I may be
asking too much? If anyone could help with this, I would be very happy
to hear from you (and Paul as well).

Thanks,

Mark


Dr. Mark Talbot
CSIRO Plant Industry
GPO Box 1600
Canberra, ACT 2601
Australia
mark.talbot-at-csiro.au

ph. 61 (0)2-6246 5256

fax. 61 (0)2-6246 5334

-----Original Message-----
X-from: PWebster-at-hei.org [mailto:PWebster-at-hei.org]
Sent: Thursday, 8 March 2007 4:42 AM
To: Talbot, Mark (PI, Black Mountain)

Hi,

We need a way to catalog stored images (EM & LM) together with
experimental
data (text) for access by in-house researchers as well as off-site
users.

Does anyone know of any commercial products available that would fit our
needs?

We have someone here who would like to try to develop this but it will
be a
waste of time and money if something is already available.

Regards,

Paul.


Paul Webster, Ph.D
House Ear Institute
2100 West Third Street
Los Angeles, CA 90057
(213) 273 8026
pwebster-at-hei.org



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From: mnesta-at-ebsciences.com
Date: Thu, 15 Mar 2007 08:24:16 -0500
Subject: [Microscopy] Re: viaWWW: TEM aperture questions

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Dear Mark,

Molybdenum and platinum apertures are drilled and thin foil apertures
are made with a deposition process using a mask. We regularly perform
SEM inspections on all types of apertures and measure for things like
roundness and concentricity. From our experience, I can tell you that
getting any aperture or apertures that will meet your spec is going to
be hit or miss, but probably more miss. At a maximum 1/2% variation for
roundness, just measuring it presents a challenge.

Sorry I don't have better news.

Best of luck,
Mike Nesta

--
Michael R. Nesta
Managing Director
Energy Beam Sciences, Inc.
Tel: 860 653-0411
Fax: 860 653-0422
MNesta-at-ebsciences.com
www.ebsciences.com
“ADDING BRILLIANCE TO YOUR VISION”



mgb-at-ansto.gov.au wrote:
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} Email: mgb-at-ansto.gov.au
} Name: Mark Blackford
}
} Organization: ANSTO
}
} Title-Subject: [Filtered] TEM aperture questions
}
} Question: Hi All,
}
} A colleague is developing a DigitalMicrograph script to help align
} our JEOL 2010F TEM. This requires a selected area aperture which is
} as close to circular as possible (better than 0.5%) to provide a
} reference image.
}
} Can anyone tell me how TEM apertures are manufactured?
} How close to a perfect circle can they be made?
}
} Cheers,
}
} Mark Blackford
}
} ---------------------------------------------------------------------------
}
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From: Pascal.Lorentz-at-unibas.ch
Date: Thu, 15 Mar 2007 08:50:38 -0500
Subject: [Microscopy] Axio Vision 3.1

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Dear All,

we are running the Zeiss Axio Vision 3.1 software on WindowsNT Workstation. Now,
we would like to install Windows XP on our system.
Does anybody know if Axio Vision 3.1 will still run on WinXP?
Any hints will be welcomed.

Best wishes

Pascal

--
Pascal Lorentz
Institute of Biochemistry and Genetics
Department of Clinical-Biological Sciences
University of Basel
Mattenstrasse 28
4058 Basel
Switzerland

Tel: +41 61 695 30 54
Fax: +41 61 267 35 66
E-mail: Pascal.Lorentz-at-unibas.ch

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From: stmccart-at-vt.edu
Date: Thu, 15 Mar 2007 11:56:02 -0500
Subject: [Microscopy] 3d optical microscope

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Hello: I am looking for information on an optical system that can take 3D
images and also measure X-Y and Z. thanks. Steve

Stephen McCartney
Senior Research Associate
Macromolecules and Interfaces Institute
2108 Hahn Hall
Va Tech
Blacksburg, VA 24061
540-231-9765 - phone
540-231-8517 - FAX


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From: dkoleary-at-verizon.net
Date: Thu, 15 Mar 2007 13:00:35 -0500
Subject: [Microscopy] LM: Polarized Light Microscopy workshop

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Bernard Friedman Memorial Workshop
Polarized Light Microscopy
May 5, 12, 19 & 26, 2007
An advanced course on polarized light microscopy which will cover the following topics:
The nature of polarized light
The origin and interpretation of interference colors
Birefringence and crystal orientation, The Indicatrix
Compensation and variable compensators
Interference figures and their interpretation
The workshop will consist of four consecutive Saturdays of lectures and hands on labs to cover the theoretical and practical aspects of polarized light microscopy. The course instructors include Jan Hinsch formerly of Leica Microsystems, Mary McCann of McCann Imaging, John Reffner of Smiths Detection and N.Y.M.S. Instructor Don O'Leary.
WHEN: May 5, 12, 19 & 26, 2006 from 10 A.M. to 4 P.M.
WHERE: 30 North Mountain Avenue, Montclair, NJ 07042. Phone (973) 744-0043
COST: $395 for N.Y.M.S. members, $425 for non-members (includes membership). Lunch and course materials are included. Checks made out to N.Y.M.S.
WHO: Advanced course for those who have completed "The Use of the Microscope" or are experienced in microscopy and familiar with the theory of its use.
HOW: Register using the form below. Limited to the first 12 registrants.
Return form to Don O'Leary, 10 Sampson Street, Unit 113, Saddle Brook, NJ 07663
FURTHER INFORMATION: Call D. O'Leary (201)368-8849 e-mail dkoleary-at-verizon.net
PLEASE POST
---------------------------------------------------------------------------------------------------------------------------
Registration Form, Polarized Light Microscopy
N.Y.M.S. Member_________________ ($395) Non-Member__________($425)
Name_____________________________________________________________
Address___________________________________________________________
City__________________State____________ZIP______________
Phone (W)_________________________(H)______________________________
e-mail________________________________________


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From: jbpawley-at-wisc.edu
Date: Thu, 15 Mar 2007 13:01:43 -0500
Subject: [Microscopy] RE: EM & LM Digital database

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi all,

As there seems a lot of interest in this, I have coped below a
section on pp 865 of the 3rd Edition of the Handbook of Biological
Confocal Microscopy (Springer, 2005) that might be of some use.

It comes from Chapter 50 on "Databases for Two- and Three-Dimensional
Microscopical
Images in Biology" by Steffen Lindek, Nicholas J. Salmon, and Ernst
H.K. Stelzer.

I trust they will approve.

I personally have no knowledge of this topic.

BioImage
BioImage is a database of multi-dimensional digital images for the
life sciences that at the time of writing is being restructured but
will soon accept image data from a variety of instruments (from
microscopy to satellite remote sensing) relating to all aspects of
biology (from ultrastructural biology to wildlife conservation). In
its first phase (1996-1999), six European research groups and two
industrial partners collaborated on a publicly-funded project investigating
the possibility of storing, in a single database, data generated
from very different specimens (ranging in size from whole
biological organisms down to macromolecules) using very different
microscopes (light, electron, and atomic force microscopes,
etc.).
The aim was to design a database system providing hitherto
unprecedented levels of comparison and data access to emphasize
different, and complementary structural aspects of similar objects.
During the transitional period that followed (2000-2001), the
consortium partners looked for a new orientation of the database
that might lead to a sustainable business model. This led to the
integration of BioImage into the ORIEL project (2002-2004):
Online Research Information Environment for the Life Sciences
(http://www.oriel.org), an EC-funded E-BioSci research project to
integrate internet-based biological information resources for the
scientific community. Because E-BioSci embraces all life sciences
topics, this meant expanding the scope of the BioImage Database
to cover non-microscopical image data such as wild-life photography,
behavioral biology, ecology, etc. At the same time, the
ability to store detailed technical information was reduced.

Cheers,

Jim P.

**********************************************
Prof. James B. Pawley, Ph. 608-263-3147
Room 223, Zoology Research Building,
FAX 608-265-5315
1117 Johnson Ave., Madison, WI, 53706
JBPAWLEY-at-WISC.EDU
3D Microscopy of Living Cells Course, June 17-28, 2007, UBC, Vancouver Canada
Info: http://www.3dcourse.ubc.ca/ Applications still being accepted.
"If it ain't diffraction, it must be statistics." Anon.

} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America


--
**********************************************
Prof. James B. Pawley, Ph. 608-263-3147
Room 223, Zoology Research Building,
FAX 608-265-5315
1117 Johnson Ave., Madison, WI, 53706
JBPAWLEY-at-WISC.EDU
3D Microscopy of Living Cells Course, June 17-28, 2007, UBC, Vancouver Canada
Info: http://www.3dcourse.ubc.ca/ Applications due by March 15, 2007
"If it ain't diffraction, it must be statistics." Anon.

==============================Original Headers==============================
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From: jd-at-laddresearch.com
Date: Thu, 15 Mar 2007 14:17:28 -0500
Subject: [Microscopy] Re: viaWWW: TEM aperture questions

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi Mark,

An aperture with a circularity tolerance of 0.5% can be done. We
micro-machine most of the standard EM/FIB apertures because they need
to be burr and flashing free.

With a tolerance of 0.5% you'd have a substantial loss rate so moly,
TA or a metal other than platinum might be a better choice to reduce
the costs.

Depending on your hole size requirements we have other techniques we
could use. We now do apertures/slits for xenon-ion propulsion
satellites. These require extremely tight tolerances and we do them
with a proprietary technique. If you want to send me a drawing we
can let you know it it's possible.

John Arnott

Ladd Research
83 Holly Court
Williston, VT 05945

On-line Catalog: www.laddresearch.com

Telephone: 1-802-658-4961 (anywhere)
Toll Free 1-800-451-3406 (US)
Fax: 1-802-660-8859

e-mail: sales-at-laddresearch.com

Disclaimer: Ladd manufactures apertures, pinholes, micro-holes, slits, etc.

At 12:08 AM 3/15/2007, you wrote:
} ----------------------------------------------------------------------------
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From: mcauliff-at-umdnj.edu
Date: Thu, 15 Mar 2007 14:47:32 -0500
Subject: [Microscopy] rejected as spam

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Nestor:

I do not understand why my responses to postings are rejected as spam.

Geoff

--
--
**********************************************
Geoff McAuliffe, Ph.D.
Neuroscience and Cell Biology
Robert Wood Johnson Medical School
675 Hoes Lane, Piscataway, NJ 08854
voice: (732)-235-4583; fax: -4029
mcauliff-at-umdnj.edu
**********************************************



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From: jpshield-at-uga.edu
Date: Thu, 15 Mar 2007 14:59:22 -0500
Subject: [Microscopy] Re: LR White polymerization

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

We routinely use 50C for 24 hrs. No problem - must be polymerized in airtight containers though. We've only used gelatin capsules, but I think there is a PCR microfuge tube we tried a long time ago that also worked. There are commercial capsules that are more transparent for UV polymerization.

Any LR White exposed to air (oxygen) will not polymerize, so even in the gelatin capsule, where the lid will have a small bubble, there will be a small amount of liquid to remove.

The other method mentioned above - if the antigen appears to be sensitive to heating and no labeling occurs, you can try to "cold" polymerize by placing the material in capsules that are UV transparent. Place in a container with dry ice and a UV bulb. There are several commercial companies that produce these special beer coolers with fans and lights and reflectors for even polymerization, etc...

John Shields
Univ. of Georgia
EM Lab


---- Original message ----
} Date: Mon, 12 Mar 2007 10:26:14 -0500
} From: rcommon-at-msu.edu
} Subject: [Microscopy] LR White polymerization
} To: jpshield-at-uga.edu
}
}
}
}
} ----------------------------------------------------------------------------
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America

706-542-4080

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From: ionsourcerer-at-mac.com
Date: Thu, 15 Mar 2007 15:41:15 -0500
Subject: [Microscopy] Home-brew Coater - The Fun Bit

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Don't know why this was just rejected as spam; no bad words, and not
selling anything.

I'll try reformatting it w/o all the prior stuff.

b.


Hi Justin,

Strictly fwiw: Regarding the " Fun Bit ".

There really isn't a lot to these things if my old Hummer II is at
all representative.

When I got mine at a yard sale, I immediately converted it into a
simple sputtering
system for doing some micro-lithographic jewelry I used to make years
ago.
www.refractal.com Eventually, I built a proper system, but still
have the
Hummer around somewhere, and planning to use it someday for teaching.

When all is said and done, a small roughing pump, TC gauge, neon
transformer,
and an egg timer is all you need if you already have the chamber.
Send me a
picture of what you have, and I'll help you with the rest.

You may have most of the bits lying around somewhere already.

Cheers,

b.

Rick Becker
Cluster Sciences, L.L.C.
Borolene Metamaterials
39 Topsfield Rd.
Ipswich, MA 01938 US
978-337-9009
ionsourcerer-at-mac.com

If you don't know where you are going, call it "exploration".
If you don't know what you are doing, call it "research".




On Mar 13, 2007, at 11:51 PM, gary-at-gaugler.com wrote:

--|
--|
--|
--|
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--| America
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--|
--| I'm puzzled by this.
--|
--| I posted for specimens for payment and got no responses.
--|
--| Should I have posted for them as free? I seek bio
--| specimens (bacteria, parasites) and I will pay for them.
--| I do not have CPD and HMDS, etc. capability. If free
--| is better and more successful than paid, let me know.
--|
--| gary g.


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From: jzheng-at-uci.edu
Date: Fri, 16 Mar 2007 00:20:56 -0500
Subject: [Microscopy] Materials Characterization Specialist position at University of

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi, There,
This position was posted on Feb 7. You still have a very short period of
time to apply it. You should contact Ms. Dorothy Miles instead of me. If
you have applied it, your documents should be properly filed. You will be
informed in due time. Best regards, Jian-Guo

Materials Characterization Specialist
University of California, Irvine
Salary: Commensurate with experience

The University of California, Irvine is seeking a materials
characterization specialist to work in the campus-wide Nanomaterials
Characterization and Fabrication Facility (NCF2). The successful candidate
is expected to have an earned PhD degree in a relevant field, possess an
extensive knowledge in analytical instrumentation (SEM, XRD, AFM, TEM,
FTIR, TGA, DSC) and research implementation, and have rich experience in
sample preparation. He/she should have either extensive knowledge of
techniques and protocols in soft materials characterization, or
demonstrate a desire to acquire such knowledge. The applicant should also
have excellent writing and inter-personal communication skills, and strong
team spirit. Good computing skills are also desirable.
The materials characterization specialist's responsibilities include
carrying out day-to-day operations of analytical equipments including, but
not limited to, SEM, XRD, TEM and AFM/STM. He/she will also be responsible
for (1) maintaining all instruments in good working condition, (2)
training and helping users in the use of analytical equipments, (3)
preparing samples and providing help to users in sample preparation, (4)
assisting in courses related to analytical instrumentation, (5) conducting
service for off-campus and industrial users, (6) maintaining the facility
infrastructure, and (7) carrying out miscellaneous facility-related tasks
assigned by the facility director. The specialist will report to the
director of NCF2. Salary is commensurate with experience. This position
will open immediately and remain open until filled.

Please include in the application the following materials:
• Curriculum Vita
• 2-3 publications
• Three letters of recommendation letters (may be submitted shortly after
the submission of the application)

Ms. Dorothy Miles
4100 Calit2 Bldg
Irvine, CA 92697-2800
djmiles-at-uci.edu
ph: 949/824-5178
fax: 949/824-4403

The University of California, Irvine is an equal opportunity employer
committed to excellence through diversity.



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8, 21 -- California, Irvine
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From: keith.morris-at-ucl.ac.uk
Date: Fri, 16 Mar 2007 06:27:10 -0500
Subject: [Microscopy] RE: EM & LM Digital database

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

Hi,

Has anyone tried the Open Microscopy Environment database system? It is
freeware opensource Linux server based software, and works with ImagJ and
commercial image analysis plugins, plus "the Java-based server system is for
visualizing, managing, and annotating microscope images and metadata". See:

http://openmicroscopy.org/

"OME is a collaborative effort among academic labs and a number of
commercial entities. All OME formats are open and available for use by the
community. All OME source code is available under the GNU library general
public license (LGPL), but OME is designed to interact with new and existing
commercial software".

I saw a presentation on the software a few years ago and it seemed quite
good, but no-one here is really interested in sharing images on this scale.
I wondered if anyone has any experience to share on the suitability of this
open-source software for a Biology optical microscope facility (it seems
literally made for this, but requires a free PC to convert to a Linux
server).

Any thoughts?

Regards

Keith

---------------------------
Dr Keith J Morris
Imaging Facilities Manager
Cell Biology
Institute of Ophthalmology
UCL, London EC1V 9EL


-----Original Message-----
X-from: jbpawley-at-wisc.edu [mailto:jbpawley-at-wisc.edu]
Sent: 15 March 2007 18:05
To: keith.morris-at-ucl.ac.uk

Hi all,

As there seems a lot of interest in this, I have coped below a
section on pp 865 of the 3rd Edition of the Handbook of Biological
Confocal Microscopy (Springer, 2005) that might be of some use.

It comes from Chapter 50 on "Databases for Two- and Three-Dimensional
Microscopical
Images in Biology" by Steffen Lindek, Nicholas J. Salmon, and Ernst
H.K. Stelzer.

I trust they will approve.

I personally have no knowledge of this topic.

BioImage
BioImage is a database of multi-dimensional digital images for the
life sciences that at the time of writing is being restructured but
will soon accept image data from a variety of instruments (from
microscopy to satellite remote sensing) relating to all aspects of
biology (from ultrastructural biology to wildlife conservation). In
its first phase (1996-1999), six European research groups and two
industrial partners collaborated on a publicly-funded project investigating
the possibility of storing, in a single database, data generated
from very different specimens (ranging in size from whole
biological organisms down to macromolecules) using very different
microscopes (light, electron, and atomic force microscopes,
etc.).
The aim was to design a database system providing hitherto
unprecedented levels of comparison and data access to emphasize
different, and complementary structural aspects of similar objects.
During the transitional period that followed (2000-2001), the
consortium partners looked for a new orientation of the database
that might lead to a sustainable business model. This led to the
integration of BioImage into the ORIEL project (2002-2004):
Online Research Information Environment for the Life Sciences
(http://www.oriel.org), an EC-funded E-BioSci research project to
integrate internet-based biological information resources for the
scientific community. Because E-BioSci embraces all life sciences
topics, this meant expanding the scope of the BioImage Database
to cover non-microscopical image data such as wild-life photography,
behavioral biology, ecology, etc. At the same time, the
ability to store detailed technical information was reduced.

Cheers,

Jim P.

**********************************************
Prof. James B. Pawley, Ph.
608-263-3147
Room 223, Zoology Research Building,
FAX 608-265-5315
1117 Johnson Ave., Madison, WI, 53706
JBPAWLEY-at-WISC.EDU
3D Microscopy of Living Cells Course, June 17-28, 2007, UBC, Vancouver
Canada
Info: http://www.3dcourse.ubc.ca/ Applications still being
accepted.
"If it ain't diffraction, it must be statistics." Anon.

} ---------------------------------------------------------------------------
-
} The Microscopy ListServer -- CoSponsor: The Microscopy Society of America


--
**********************************************
Prof. James B. Pawley, Ph.
608-263-3147
Room 223, Zoology Research Building,
FAX 608-265-5315
1117 Johnson Ave., Madison, WI, 53706
JBPAWLEY-at-WISC.EDU
3D Microscopy of Living Cells Course, June 17-28, 2007, UBC, Vancouver
Canada
Info: http://www.3dcourse.ubc.ca/ Applications due by March 15,
2007
"If it ain't diffraction, it must be statistics." Anon.

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12, 27 -- Subject: [Microscopy] RE: EM & LM Digital database
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From: rjharris-at-uwo.ca
Date: Fri, 16 Mar 2007 10:26:29 -0500
Subject: [Microscopy] EM & LM Digital database

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

The Open Microscopy Environment (OME) System is being used by labs for their research, a few examples are here: http://www.openmicroscopy.org/use/ OME is being actively developed and while it has several components such as Bio-Formats (http://www.loci.wisc.edu/ome/formats.html) that are being actively used and deployed by non-developer microscopists much of the current OME system is geared towards labs with developer experience. There are active efforts to improve functionality, user installation and performance. One example is the OMERO project which I have pasted below from a recent announcement to the confocal list. For a lab with no development experience looking for a off the shelf solution with the functionality that the original poster requested, the OME system is not currently the answer but will be in the future as it continues to develop (I should note that the focus is now on optical microscopy but we hope to eventually target electron microscopy data as well). The
OME Group gives frequent presentations to update the community on its progress and in fact there will be such a update meeting in Paris on March 30th. I have pasted a announcement about this below. We also have a update meeting about OME in the US at the yearly American Society for Cell Biology Meeting. There are active OME listserves that anyone can join at the www.openmicroscopy.org webpage which also has frequent updates and summaries of meetings. For labs with development interest or companies interested in helping we encourage and need additional OME developer collaborators. Please feel free to contact myself or Jason Swedlow with any questions or comments.

best,
kevin

**********
The OME project is pleased to announce the release of OMERO3.0-
Beta1. OMERO is a Java Enterprise port of the data management and
visualization functions of the perl-based OME Server. The OMERO
Server ships with a JBOSS Application Server, PostgreSQL RDMS, and
uses three client applications: OMERO.insight, OMERO.importer, and
OMERO.admin.

All OMERO resources are available at our newly designed software
download page:

http://openmicroscopy.org/software/

For new initiates, User Guides for OMERO client applications are
available at our MilestoneDownloads page:

http://trac.openmicroscopy.org.uk/omero/wiki/MilestoneDownloads

OMERO installation on OS X is all by Mac packages and should be
automatic. There are manual install instructions for Linux and OS X
geeks.

Please let us know any problems, wishes etc.

**************

Some background and resources:

OMERO3 is a Java EE (formerly J2EE) application designed for the
JBoss application server. OMERO3 runs under Linux and OS X and uses
Hibernate for mapping to a PostgreSQL database (support for MySQL and
Oracle are in progress, but have been demonstrated; contact us if
interested). OMERO3 requires Java1.5. Our testing has all occurred
on Pentium IV or AMD 250-series systems, with 1-2 GB RAM and a Gbit
network connection. The OMERO3 docs page is at:

http://cvs.openmicroscopy.org.uk/tiki/tiki-index.php?page=Omero

Note that this is really for developers.

OMERO.insight is our cross-platform Java client that uses an OMERO3
server. OMERO.insight is our first client; OMERO3 is designed to
support a number of different clients and client platforms (we are
considering our long-term strategies for client environments).
OMERO.insight seems to run well under Linux (so far, tested on RHE3),
Windows XP-SP2, and OS X; the package requires Java1.5. We have
used OMERO.insight on laptops with G4, Intel for Mac, and Intel P4
processors, usually with 0.5 - 1 GB RAM and 100Mbit or Gbit NICs.

OMERO.importer is our data importer. This is a Java client (requires
Java1.5), that currently imports data from a client filesystem into
an OMERO3 server. For import of external file formats, the OMERO
project is using BioFormats- see http://loci.wisc.edu/ome/
formats.html. Currently, OMEROImport supports two file formats--
APLLC DV and MetaMorph's STK. We are of course working to include
OMERO.importer as a component of OMERO.insight, as well as supporting
server-side import. A major goal is the extension of proprietary
file format support in OMERO.importer to include all files supported
in Bio-Formats. We, along with our colleagues at LOCI, are working
hard to expand the range of proprietary file formats supported in
BioFormats. Stay tuned!

What does OMERO do? Mostly, image visualization and image data
management. There is not yet support for any management of image
analysis results and data-- this continues to be one of the hallmarks
of the released OME 2.x server (OME2.6.0 is now available at http://
cvs.openmicroscopy.org.uk; we use this system in the lab for large-
scale image analysis). The OMERO3-Beta1 package provides the ability
to organize image data into Projects and Datasets and also user-
defined CategoryGroups and Categories (see http://openmicroscopy.org/
getting-started/manual_classification.html). In addition, our
server-based Rendering Engine provides image visualization functions
in a remote client environment. Our testing suggests that this that
is a very useful tool for visualising image data in a client-server
environment.

Note that the OME and OMERO Servers are parallel, complementary
projects. They are currently focussing on different function sets--
see http://www.openmicroscopy.org/software/why2servers.html for more
info.

We have recognized the importance of getting feedback on the design,
development, and documentation of OMERO and its clients. OMERO
clients include an automatic bug logging system-- using this helps us
to help you. As the above web pages suggest, we target our work
around a series of milestones, and try to produce packages for
testing these milestones. These should not be seen as finished,
released software, but they are tested and (largely) work as
promised. They are beta and should demonstrate what OMERO can achieve.

Thanks again for your interest and support.

Cheers,

Jason Swedlow
Open Microscopy Environment: http://openmicroscopy.org

********
The OME project is pleased to announce the next OME European Users
Meeting, to be held at the Le Meditel Club in Paris, in association
with Institut Pasteur, March 29/30, 2007. Spencer Shorte, the
Director of the Plateforme d'Imagerie Dynamique at the Institut
Pasteur has kindly agreed to host the meeting.

A draft meeting programme is at the OME website (http://
openmicroscopy.org/latest/euro2007-03.html). We will start the
morning of March 29 with presentations of newly released software,
including the new OME Server2.6.0, the new Java-based OMERO Server
and its clients (see http://openmicroscopy.org/software/), the OME
file formats (http://www.loci.wisc.edu/ome/formats.html & http://
www.loci.wisc.edu/ome/ome-tiff-spec.html), format conversion library
(Bio-Formats; http://loci.wisc.edu/ome/formats.html) and our efforts
to drive usability of our tools (http://www.usableimage.com). The
current programme also includes presentations from Anne Carpenter,
from the Broad Institute on CellProfiler an CellVisualizer (http://
www.cellprofiler.org/), Curtis Rueden from LOCI, Univ of Wisconsin,
Madison (http://www.loci.wisc.edu) and Patrick Courtney (PerkinElmer
LifeSciences).

March 30 will focus on defining goals for critical functionality for
OME and other tools, using breakout groups led by experts in data
models, file formats, usability testing and software development. We
hope to generate a broad roadmap that will define this community's
focus for the next year.

Currently, we have about 30 attendees signed up form US, UK, France,
Switzerland from both academia and commercial institutions.

If you are interested in attending , please send your name,
institution, and contact details to:

Mme Christiane Pacaud (the Imagopole Administrative Assistant),
chrispac-at-pasteur.fr

It will help us if you tell us when you will be arriving and leaving
Paris (to organise airport/train transport, if possible-- no
guarantees, but we will try).

Any requests for presentations or other programme issues can be
addressed to myself and Spencer.

We regret we have no funds to pay for travel or accommodation of
participants, but we will cover coffee and lunch during the meeting.

See you in Paris!

Cheers,

Jason
************

----- Original Message -----
X-from: keith.morris-at-ucl.ac.uk

Hello Mark & Paul
We've just gone through this exercise for the Biotron (here at University of
Western Ontario). Our requirements were for a robust internet accessible
data base that could handle and correlate data in many different formats
(confocal, LM, TEM, SEM, flow cytometery, GS/MS, spectral data, spreadsheet
output from analysis systems and point data such as temperatures, humidity,
etc.) we were also looking for a system that could handle a large ( 10's -
100's of TB) data base information and also allow sophisticated queries and
provide for video, audio and on-line chats all with a (reasonably) user
friendly interface.
We looked at and evaluated a large selection of 'off the shelf' products and
a panoply of custom programmed systems. We chose a product marketed by
Hitachi High Technologies - the Quartz/PCI Wide Area Microscopy suite (no
financial interests in this group - but we are satisfied with both the
product and our relation with Hitachi).
Feel free to contact me off list for more detailed discussions.

Rick
Richard Harris
Manager - Imaging and Data Systems
The Biotron Climate Change Research Facility
The University of Western Ontario
London ON CA
www.biotron.uwo.ca



-----Original Message-----
X-from: mark.talbot-at-csiro.au [mailto:mark.talbot-at-csiro.au]
Sent: Thursday, March 15, 2007 12:30 AM
To: rjharris-at-uwo.ca

Hi Paul,

I have exactly the same question. I am trying to find a database that
will coordinate the cataloguing of images from SEM, confocal and light
microscopes from a large number of regular and temporary users. The
software not only needs to catalogue the images but also accommodate
updateable links to electronic 'notebooks' which describe experimental
details and results (which can be accessed over a network and edited by
people associated with the project). It is also preferable to database
such things as linked PDFs (relevant literature) and data files such as
Excel spreadsheets.

I have so far not managed to find one single program that can do all of
this! There's a great database program called Pax-It, but this is a
little bit user-unfriendly (one important stipulation is that the
program needs to be user-friendly since it would be used by a large mix
of people with a gradation of computer literacy) and so far I can't see
any ability to database together with electronic notebooks. But I may be
asking too much? If anyone could help with this, I would be very happy
to hear from you (and Paul as well).

Thanks,

Mark


Dr. Mark Talbot
CSIRO Plant Industry
GPO Box 1600
Canberra, ACT 2601
Australia
mark.talbot-at-csiro.au

ph. 61 (0)2-6246 5256

fax. 61 (0)2-6246 5334

-----Original Message-----
X-from: PWebster-at-hei.org [mailto:PWebster-at-hei.org]
Sent: Thursday, 8 March 2007 4:42 AM
To: Talbot, Mark (PI, Black Mountain)

Hi,

We need a way to catalog stored images (EM & LM) together with
experimental
data (text) for access by in-house researchers as well as off-site
users.

Does anyone know of any commercial products available that would fit our
needs?

We have someone here who would like to try to develop this but it will
be a
waste of time and money if something is already available.

Regards,

Paul.


Paul Webster, Ph.D
House Ear Institute
2100 West Third Street
Los Angeles, CA 90057
(213) 273 8026
pwebster-at-hei.org



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From: opmills-at-mtu.edu
Date: Fri, 16 Mar 2007 13:16:20 -0500
Subject: [Microscopy] shorted leadwires - current contrast?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopy.com/MicroscopyListserver/MicroscopyArchives.html

All,

We have a shorted biomedical leadwire. We've used test equipment to
verify the short. What we would like to do is to visually identify
the location of the short - in the SEM. The leadwire consists of 4
ea ~1mm insulated wires that are then sheathed in insulation. We can
sacrifice the outer insulation but need to retain insulation on the
inner wires. I've imagined that if we power the cables inside the
SEM, we might see current contrast that would divert from one
conductor to another at the short.

Is this experiment as easy as;

building a vacuum feedthrough,
connecting a external bench power supply
wiring the cable to the feedthrough inside the SEM
turn it all on and... WAH LAH! current contrast???

Probably not that easy, so what am I missing?

Owen Mills
Michigan TEch University

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